RNA–Protein interactions for RNA: ENST00000549205.1

ERBB3-208, Transcript of erb-b2 receptor tyrosine kinase 3, human

TSL 5

Gene ERBB3, Length 971 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERBB3-208	ENST00000549205	SPI1	P17947	270 aa		10.84	□□□□□ -0.67
ERBB3-208	ENST00000549205	AGTR1	P30556	359 aa		10.84	□□□□□ -0.67
ERBB3-208	ENST00000549205	HTR1F	P30939	366 aa		10.84	□□□□□ -0.67
ERBB3-208	ENST00000549205	CSNK1A1	P48729	337 aa		10.84	□□□□□ -0.67
ERBB3-208	ENST00000549205	SELENOP	P49908	381 aa		10.84	□□□□□ -0.67
ERBB3-208	ENST00000549205	NUDT6	P53370	316 aa		10.84	□□□□□ -0.67
ERBB3-208	ENST00000549205	CDH11	P55287	796 aa		10.84	□□□□□ -0.67
ERBB3-208	ENST00000549205	LGALS3BP	Q08380	585 aa		10.84	□□□□□ -0.67
ERBB3-208	ENST00000549205	APOF	Q13790	326 aa		10.84	□□□□□ -0.67
ERBB3-208	ENST00000549205	GUSBP1	Q15486	140 aa		10.84	□□□□□ -0.67
ERBB3-208	ENST00000549205	HIST3H3	Q16695	136 aa		10.84	□□□□□ -0.67
ERBB3-208	ENST00000549205	KLHL12	Q53G59	568 aa		10.84	□□□□□ -0.67
ERBB3-208	ENST00000549205	THEM4	Q5T1C6	240 aa		10.84	□□□□□ -0.67
ERBB3-208	ENST00000549205	CARD17	Q5XLA6	110 aa		10.84	□□□□□ -0.67
ERBB3-208	ENST00000549205	MEPCE	Q7L2J0	689 aa	Known RBP	10.84	□□□□□ -0.67
ERBB3-208	ENST00000549205	DOLPP1	Q86YN1	238 aa		10.84	□□□□□ -0.67
ERBB3-208	ENST00000549205	C9orf106	Q8NAJ2	232 aa		10.84	□□□□□ -0.67
ERBB3-208	ENST00000549205	BPIFB6	Q8NFQ5	453 aa		10.84	□□□□□ -0.67
ERBB3-208	ENST00000549205	OR2T4	Q8NH00	348 aa		10.84	□□□□□ -0.67
ERBB3-208	ENST00000549205	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	10.84	□□□□□ -0.67
ERBB3-208	ENST00000549205	FNDC8	Q8TC99	324 aa		10.84	□□□□□ -0.67
ERBB3-208	ENST00000549205	TMEM54	Q969K7	222 aa		10.84	□□□□□ -0.67
ERBB3-208	ENST00000549205	TSSK2	Q96PF2	358 aa		10.84	□□□□□ -0.67
ERBB3-208	ENST00000549205	RBP7	Q96R05	134 aa		10.84	□□□□□ -0.67
ERBB3-208	ENST00000549205	NUAK2	Q9H093	628 aa		10.84	□□□□□ -0.67
ERBB3-208	ENST00000549205	PARPBP	Q9NWS1	579 aa		10.84	□□□□□ -0.67
ERBB3-208	ENST00000549205	ASB6	Q9NWX5	421 aa		10.84	□□□□□ -0.67
ERBB3-208	ENST00000549205	FOXD3	Q9UJU5	478 aa	Predicted RBP	10.84	□□□□□ -0.67
ERBB3-208	ENST00000549205	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	10.84	□□□□□ -0.67
ERBB3-208	ENST00000549205	MYRF	Q9Y2G1	1151 aa		10.84	□□□□□ -0.67
ERBB3-208	ENST00000549205	FKBP7	Q9Y680	259 aa		10.84	□□□□□ -0.67
ERBB3-208	ENST00000549205	USP9X	Q93008	2570 aa	Predicted RBP	10.84	□□□□□ -0.67
ERBB3-208	ENST00000549205	ANKHD1	Q8IWZ3	2542 aa	Known RBP	10.83	□□□□□ -0.68
ERBB3-208	ENST00000549205	IGLV1-36	A0A0B4J1U3	117 aa		10.83	□□□□□ -0.68
ERBB3-208	ENST00000549205	OR6C65	A6NJZ3	312 aa		10.83	□□□□□ -0.68
ERBB3-208	ENST00000549205	SLC22A31	A6NKX4	558 aa		10.83	□□□□□ -0.68
ERBB3-208	ENST00000549205	DCTN6	O00399	190 aa		10.83	□□□□□ -0.68
ERBB3-208	ENST00000549205	XPNPEP2	O43895	674 aa		10.83	□□□□□ -0.68
ERBB3-208	ENST00000549205	MRPL33	O75394	65 aa	Known RBP	10.83	□□□□□ -0.68
ERBB3-208	ENST00000549205	TNFAIP8	O95379	198 aa		10.83	□□□□□ -0.68
ERBB3-208	ENST00000549205	GYPB	P06028	91 aa		10.83	□□□□□ -0.68
ERBB3-208	ENST00000549205	DBT	P11182	482 aa	Known RBP	10.83	□□□□□ -0.68
ERBB3-208	ENST00000549205	NR2C1	P13056	603 aa		10.83	□□□□□ -0.68
ERBB3-208	ENST00000549205	CTLA4	P16410	223 aa		10.83	□□□□□ -0.68
ERBB3-208	ENST00000549205	CRHBP	P24387	322 aa		10.83	□□□□□ -0.68
ERBB3-208	ENST00000549205	CRABP1	P29762	137 aa		10.83	□□□□□ -0.68
ERBB3-208	ENST00000549205	ZNF91	Q05481	1191 aa		10.83	□□□□□ -0.68
ERBB3-208	ENST00000549205	FMOD	Q06828	376 aa		10.83	□□□□□ -0.68
ERBB3-208	ENST00000549205	DBP	Q10586	325 aa	Predicted RBP	10.83	□□□□□ -0.68
ERBB3-208	ENST00000549205	TMED1	Q13445	227 aa		10.83	□□□□□ -0.68
ERBB3-208	ENST00000549205	SLC35D3	Q5M8T2	416 aa		10.83	□□□□□ -0.68
ERBB3-208	ENST00000549205	DNM1P34	Q6PK57	102 aa		10.83	□□□□□ -0.68
ERBB3-208	ENST00000549205	B3GNT6	Q6ZMB0	384 aa		10.83	□□□□□ -0.68
ERBB3-208	ENST00000549205	SEM1	Q6ZVN7	128 aa		10.83	□□□□□ -0.68
ERBB3-208	ENST00000549205	NUFIP2	Q7Z417	695 aa	Known RBP	10.83	□□□□□ -0.68
ERBB3-208	ENST00000549205	ZBTB46	Q86UZ6	589 aa		10.83	□□□□□ -0.68
ERBB3-208	ENST00000549205	C20orf196	Q8IYI0	205 aa		10.83	□□□□□ -0.68
ERBB3-208	ENST00000549205	OR6V1	Q8N148	313 aa		10.83	□□□□□ -0.68
ERBB3-208	ENST00000549205	PROKR2	Q8NFJ6	384 aa		10.83	□□□□□ -0.68
ERBB3-208	ENST00000549205	OR6N1	Q8NGY5	312 aa		10.83	□□□□□ -0.68
ERBB3-208	ENST00000549205	INTS12	Q96CB8	462 aa	Known RBP	10.83	□□□□□ -0.68
ERBB3-208	ENST00000549205	RACGAP1	Q9H0H5	632 aa		10.83	□□□□□ -0.68
ERBB3-208	ENST00000549205	OR51V1	Q9H2C8	321 aa		10.83	□□□□□ -0.68
ERBB3-208	ENST00000549205	SRA1	Q9HD15	236 aa	Known RBP	10.83	□□□□□ -0.68
ERBB3-208	ENST00000549205	AMBN	Q9NP70	447 aa		10.83	□□□□□ -0.68
ERBB3-208	ENST00000549205	SCN3B	Q9NY72	215 aa		10.83	□□□□□ -0.68
ERBB3-208	ENST00000549205	GLTP	Q9NZD2	209 aa		10.83	□□□□□ -0.68
ERBB3-208	ENST00000549205	WARS2	Q9UGM6	360 aa	Known RBP	10.83	□□□□□ -0.68
ERBB3-208	ENST00000549205	BLOC1S6	Q9UL45	172 aa		10.83	□□□□□ -0.68
ERBB3-208	ENST00000549205	MOK	Q9UQ07	419 aa		10.83	□□□□□ -0.68
ERBB3-208	ENST00000549205	RPL36	Q9Y3U8	105 aa	Known RBP	10.83	□□□□□ -0.68
ERBB3-208	ENST00000549205	LRRK2	Q5S007	2527 aa		10.83	□□□□□ -0.68
ERBB3-208	ENST00000549205	SPTAN1	Q13813	2472 aa	Known RBP	10.82	□□□□□ -0.68
ERBB3-208	ENST00000549205	EFCAB10	A6NFE3	127 aa		10.82	□□□□□ -0.68
ERBB3-208	ENST00000549205	SLC16A7	O60669	478 aa		10.82	□□□□□ -0.68
ERBB3-208	ENST00000549205	SMNDC1	O75940	238 aa	Known RBP eCLIP	10.82	□□□□□ -0.68
ERBB3-208	ENST00000549205	GLCE	O94923	617 aa		10.82	□□□□□ -0.68
ERBB3-208	ENST00000549205	CRH	P06850	196 aa		10.82	□□□□□ -0.68
ERBB3-208	ENST00000549205	QDPR	P09417	244 aa		10.82	□□□□□ -0.68
ERBB3-208	ENST00000549205	PYCR1	P32322	319 aa		10.82	□□□□□ -0.68
ERBB3-208	ENST00000549205	TIMP3	P35625	211 aa		10.82	□□□□□ -0.68
ERBB3-208	ENST00000549205	SLC15A1	P46059	708 aa		10.82	□□□□□ -0.68
ERBB3-208	ENST00000549205	MTNR1A	P48039	350 aa		10.82	□□□□□ -0.68
ERBB3-208	ENST00000549205	ZNF133	P52736	654 aa	Predicted RBP	10.82	□□□□□ -0.68
ERBB3-208	ENST00000549205	RPS7	P62081	194 aa	Known RBP	10.82	□□□□□ -0.68
ERBB3-208	ENST00000549205	EIF2S3L	Q2VIR3	472 aa	Known RBP	10.82	□□□□□ -0.68
ERBB3-208	ENST00000549205	KCTD21	Q4G0X4	260 aa		10.82	□□□□□ -0.68
ERBB3-208	ENST00000549205	PHYHD1	Q5SRE7	291 aa		10.82	□□□□□ -0.68
ERBB3-208	ENST00000549205	LINC01590	Q5TEZ4	76 aa		10.82	□□□□□ -0.68
ERBB3-208	ENST00000549205	LCN1P1	Q5VSP4	162 aa		10.82	□□□□□ -0.68
ERBB3-208	ENST00000549205	LRFN4	Q6PJG9	635 aa		10.82	□□□□□ -0.68
ERBB3-208	ENST00000549205	SLC25A47	Q6Q0C1	308 aa		10.82	□□□□□ -0.68
ERBB3-208	ENST00000549205	C3P1	Q6ZMU1	363 aa		10.82	□□□□□ -0.68
ERBB3-208	ENST00000549205	FAM214B	Q7L5A3	538 aa		10.82	□□□□□ -0.68
ERBB3-208	ENST00000549205	GCNT2	Q8N0V5	402 aa		10.82	□□□□□ -0.68
ERBB3-208	ENST00000549205	OR51L1	Q8NGJ5	315 aa		10.82	□□□□□ -0.68
ERBB3-208	ENST00000549205	ZNRF4	Q8WWF5	429 aa		10.82	□□□□□ -0.68
ERBB3-208	ENST00000549205	KISS1R	Q969F8	398 aa	Predicted RBP	10.82	□□□□□ -0.68
ERBB3-208	ENST00000549205	MCHR2	Q969V1	340 aa		10.82	□□□□□ -0.68
ERBB3-208	ENST00000549205	APH1A	Q96BI3	265 aa		10.82	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms