RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 POMZP3Q6PJE2 187 aa12.82□□□□□ -0.36
RAPGEF3-218ENST00000548919 ARSKQ6UWY0 536 aa12.82□□□□□ -0.36
RAPGEF3-218ENST00000548919 LRRN1Q6UXK5 716 aa12.82□□□□□ -0.36
RAPGEF3-218ENST00000548919 PARGQ86W56 976 aa12.82□□□□□ -0.36
RAPGEF3-218ENST00000548919 LRRC75AQ8NAA5 344 aa12.82□□□□□ -0.36
RAPGEF3-218ENST00000548919 AVL9Q8NBF6 648 aa12.82□□□□□ -0.36
RAPGEF3-218ENST00000548919 KTI12Q96EK9 354 aaPredicted RBP12.82□□□□□ -0.36
RAPGEF3-218ENST00000548919 TSPAN32Q96QS1 320 aa12.82□□□□□ -0.36
RAPGEF3-218ENST00000548919 SYT4Q9H2B2 425 aa12.82□□□□□ -0.36
RAPGEF3-218ENST00000548919 EVA1AQ9H8M9 152 aa12.82□□□□□ -0.36
RAPGEF3-218ENST00000548919 EXOSC3Q9NQT5 275 aaKnown RBP12.82□□□□□ -0.36
RAPGEF3-218ENST00000548919 GRHPRQ9UBQ7 328 aa12.82□□□□□ -0.36
RAPGEF3-218ENST00000548919 GTF2A1LQ9UNN4 478 aa12.82□□□□□ -0.36
RAPGEF3-218ENST00000548919 HIF3AQ9Y2N7 669 aa12.82□□□□□ -0.36
RAPGEF3-218ENST00000548919 KLF8O95600 359 aaPredicted RBP12.82□□□□□ -0.36
RAPGEF3-218ENST00000548919 APBB3O95704 486 aa12.82□□□□□ -0.36
RAPGEF3-218ENST00000548919 PPP3CBP16298 524 aa12.82□□□□□ -0.36
RAPGEF3-218ENST00000548919 MST1P26927 711 aa12.82□□□□□ -0.36
RAPGEF3-218ENST00000548919 FAUP35544 74 aaKnown RBP12.82□□□□□ -0.36
RAPGEF3-218ENST00000548919 MNDAP41218 407 aa12.82□□□□□ -0.36
RAPGEF3-218ENST00000548919 DMWDQ09019 674 aa12.82□□□□□ -0.36
RAPGEF3-218ENST00000548919 ISXQ2M1V0 245 aa12.82□□□□□ -0.36
RAPGEF3-218ENST00000548919 ANKRD16Q6P6B7 361 aa12.82□□□□□ -0.36
RAPGEF3-218ENST00000548919 SLC35D2Q76EJ3 337 aa12.82□□□□□ -0.36
RAPGEF3-218ENST00000548919 ZNF595Q8IYB9 648 aa12.82□□□□□ -0.36
RAPGEF3-218ENST00000548919 RELL2Q8NC24 303 aaPredicted RBP12.82□□□□□ -0.36
RAPGEF3-218ENST00000548919 SLC37A2Q8TED4 501 aa12.82□□□□□ -0.36
RAPGEF3-218ENST00000548919 DUSP19Q8WTR2 217 aa12.82□□□□□ -0.36
RAPGEF3-218ENST00000548919 MRI1Q9BV20 369 aa12.82□□□□□ -0.36
RAPGEF3-218ENST00000548919 OR10A5Q9H207 317 aa12.82□□□□□ -0.36
RAPGEF3-218ENST00000548919 MMP25Q9NPA2 562 aa12.82□□□□□ -0.36
RAPGEF3-218ENST00000548919 PFDN2Q9UHV9 154 aa12.82□□□□□ -0.36
RAPGEF3-218ENST00000548919 GPR160Q9UJ42 338 aa12.82□□□□□ -0.36
RAPGEF3-218ENST00000548919 KCNG2Q9UJ96 466 aa12.82□□□□□ -0.36
RAPGEF3-218ENST00000548919 PRUNE2Q8WUY3 3088 aa12.82□□□□□ -0.36
RAPGEF3-218ENST00000548919 TRBV5-7A0A0A0MS05 114 aa12.81□□□□□ -0.36
RAPGEF3-218ENST00000548919 C17orf51A8MQB3 221 aa12.81□□□□□ -0.36
RAPGEF3-218ENST00000548919 A8MXK9 166 aa12.81□□□□□ -0.36
RAPGEF3-218ENST00000548919 NAGAP17050 411 aa12.81□□□□□ -0.36
RAPGEF3-218ENST00000548919 KIR3DL2P43630 455 aa12.81□□□□□ -0.36
RAPGEF3-218ENST00000548919 GPR3P46089 330 aa12.81□□□□□ -0.36
RAPGEF3-218ENST00000548919 SLC25A1P53007 311 aa12.81□□□□□ -0.36
RAPGEF3-218ENST00000548919 BAMBIQ13145 260 aa12.81□□□□□ -0.36
RAPGEF3-218ENST00000548919 GK2Q14410 553 aaPredicted RBP12.81□□□□□ -0.36
RAPGEF3-218ENST00000548919 ZNF660Q6AZW8 331 aaPredicted RBP12.81□□□□□ -0.36
RAPGEF3-218ENST00000548919 CFAP77Q6ZQR2 320 aa12.81□□□□□ -0.36
RAPGEF3-218ENST00000548919 OR1S1Q8NH92 325 aa12.81□□□□□ -0.36
RAPGEF3-218ENST00000548919 PHOSPHO1Q8TCT1 267 aa12.81□□□□□ -0.36
RAPGEF3-218ENST00000548919 TSEN15Q8WW01 171 aaKnown RBP12.81□□□□□ -0.36
RAPGEF3-218ENST00000548919 DGAT2Q96PD7 388 aa12.81□□□□□ -0.36
RAPGEF3-218ENST00000548919 COMMD4Q9H0A8 199 aa12.81□□□□□ -0.36
RAPGEF3-218ENST00000548919 HMSDA8MTL9 139 aa12.81□□□□□ -0.36
RAPGEF3-218ENST00000548919 ZNF254O75437 659 aa12.81□□□□□ -0.36
RAPGEF3-218ENST00000548919 RLN2P04090 185 aa12.81□□□□□ -0.36
RAPGEF3-218ENST00000548919 CTRB1P17538 263 aa12.81□□□□□ -0.36
RAPGEF3-218ENST00000548919 CCKBRP32239 447 aa12.81□□□□□ -0.36
RAPGEF3-218ENST00000548919 KLHL26Q53HC5 615 aa12.81□□□□□ -0.36
RAPGEF3-218ENST00000548919 WDR38Q5JTN6 314 aa12.81□□□□□ -0.36
RAPGEF3-218ENST00000548919 NUP210LQ5VU65 1888 aa12.81□□□□□ -0.36
RAPGEF3-218ENST00000548919 CTRB2Q6GPI1 263 aa12.81□□□□□ -0.36
RAPGEF3-218ENST00000548919 TSSK4Q6SA08 328 aa12.81□□□□□ -0.36
RAPGEF3-218ENST00000548919 ATG4DQ86TL0 474 aaPredicted RBP12.81□□□□□ -0.36
RAPGEF3-218ENST00000548919 PM20D2Q8IYS1 436 aa12.81□□□□□ -0.36
RAPGEF3-218ENST00000548919 PLPP7Q8NBV4 271 aa12.81□□□□□ -0.36
RAPGEF3-218ENST00000548919 OR6N1Q8NGY5 312 aa12.81□□□□□ -0.36
RAPGEF3-218ENST00000548919 GPR148Q8TDV2 347 aa12.81□□□□□ -0.36
RAPGEF3-218ENST00000548919 ELSPBP1Q96BH3 223 aa12.81□□□□□ -0.36
RAPGEF3-218ENST00000548919 EXO5Q9H790 373 aa12.81□□□□□ -0.36
RAPGEF3-218ENST00000548919 MED11Q9P086 117 aa12.81□□□□□ -0.36
RAPGEF3-218ENST00000548919 ZNF230Q9UIE0 474 aaPredicted RBP12.81□□□□□ -0.36
RAPGEF3-218ENST00000548919 CDV3Q9UKY7 258 aaKnown RBP12.81□□□□□ -0.36
RAPGEF3-218ENST00000548919 BET1O15155 118 aa12.81□□□□□ -0.36
RAPGEF3-218ENST00000548919 PRAMEF2O60811 474 aa12.81□□□□□ -0.36
RAPGEF3-218ENST00000548919 CSF1P09603 554 aa12.81□□□□□ -0.36
RAPGEF3-218ENST00000548919 ALOX5APP20292 161 aa12.81□□□□□ -0.36
RAPGEF3-218ENST00000548919 C2orf76Q3KRA6 126 aa12.81□□□□□ -0.36
RAPGEF3-218ENST00000548919 B3GNTL1Q67FW5 361 aaPredicted RBP12.81□□□□□ -0.36
RAPGEF3-218ENST00000548919 Q6ZSR6 202 aa12.81□□□□□ -0.36
RAPGEF3-218ENST00000548919 MED25Q71SY5 747 aa12.81□□□□□ -0.36
RAPGEF3-218ENST00000548919 OVCH2Q7RTZ1 564 aa12.81□□□□□ -0.36
RAPGEF3-218ENST00000548919 ZNF417Q8TAU3 575 aa12.81□□□□□ -0.36
RAPGEF3-218ENST00000548919 PMEPA1Q969W9 287 aa12.81□□□□□ -0.36
RAPGEF3-218ENST00000548919 TOE1Q96GM8 510 aaKnown RBP12.81□□□□□ -0.36
RAPGEF3-218ENST00000548919 MYEF2Q9P2K5 600 aaKnown RBP12.81□□□□□ -0.36
RAPGEF3-218ENST00000548919 SLC22A13Q9Y226 551 aa12.81□□□□□ -0.36
RAPGEF3-218ENST00000548919 RWDD3Q9Y3V2 267 aa12.81□□□□□ -0.36
RAPGEF3-218ENST00000548919 CLDN16Q9Y5I7 305 aa12.81□□□□□ -0.36
RAPGEF3-218ENST00000548919 HOXC4P09017 264 aaPredicted RBP12.8□□□□□ -0.36
RAPGEF3-218ENST00000548919 CENPAP49450 140 aa12.8□□□□□ -0.36
RAPGEF3-218ENST00000548919 MANEAQ5SRI9 462 aa12.8□□□□□ -0.36
RAPGEF3-218ENST00000548919 WBP2NLQ6ICG8 309 aa12.8□□□□□ -0.36
RAPGEF3-218ENST00000548919 TMED4Q7Z7H5 227 aa12.8□□□□□ -0.36
RAPGEF3-218ENST00000548919 SDR16C5Q8N3Y7 309 aa12.8□□□□□ -0.36
RAPGEF3-218ENST00000548919 ZNF321PQ8N8H1 164 aa12.8□□□□□ -0.36
RAPGEF3-218ENST00000548919 ZNF454Q8N9F8 522 aa12.8□□□□□ -0.36
RAPGEF3-218ENST00000548919 BVESQ8NE79 360 aa12.8□□□□□ -0.36
RAPGEF3-218ENST00000548919 C15orf40Q8WUR7 153 aa12.8□□□□□ -0.36
RAPGEF3-218ENST00000548919 MFFQ9GZY8 342 aa12.8□□□□□ -0.36
RAPGEF3-218ENST00000548919 POFUT1Q9H488 388 aa12.8□□□□□ -0.36
RAPGEF3-218ENST00000548919 APMAPQ9HDC9 416 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms