RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 LOC100653049A0A140TA62 436 aa11.47□□□□□ -0.57
CPSF6-204ENST00000547486 DHHO43323 396 aa11.47□□□□□ -0.57
CPSF6-204ENST00000547486 SYNGR3O43761 229 aa11.47□□□□□ -0.57
CPSF6-204ENST00000547486 KRT34O76011 436 aa11.47□□□□□ -0.57
CPSF6-204ENST00000547486 UBL3O95164 117 aa11.47□□□□□ -0.57
CPSF6-204ENST00000547486 RAB36O95755 333 aa11.47□□□□□ -0.57
CPSF6-204ENST00000547486 MT-ND1P03886 318 aa11.47□□□□□ -0.57
CPSF6-204ENST00000547486 SERPINA5P05154 406 aa11.47□□□□□ -0.57
CPSF6-204ENST00000547486 F13BP05160 661 aa11.47□□□□□ -0.57
CPSF6-204ENST00000547486 TACSTD2P09758 323 aa11.47□□□□□ -0.57
CPSF6-204ENST00000547486 OR8G3PP0DMU2 310 aa11.47□□□□□ -0.57
CPSF6-204ENST00000547486 UMPSP11172 480 aa11.47□□□□□ -0.57
CPSF6-204ENST00000547486 FUT1P19526 365 aa11.47□□□□□ -0.57
CPSF6-204ENST00000547486 TCN1P20061 433 aaPredicted RBP11.47□□□□□ -0.57
CPSF6-204ENST00000547486 FUT4P22083 530 aa11.47□□□□□ -0.57
CPSF6-204ENST00000547486 COL8A2P25067 703 aa11.47□□□□□ -0.57
CPSF6-204ENST00000547486 ALDH3B1P43353 468 aa11.47□□□□□ -0.57
CPSF6-204ENST00000547486 OR1E2P47887 323 aa11.47□□□□□ -0.57
CPSF6-204ENST00000547486 UGT2B15P54855 530 aa11.47□□□□□ -0.57
CPSF6-204ENST00000547486 RPL18Q07020 188 aaKnown RBP11.47□□□□□ -0.57
CPSF6-204ENST00000547486 KLF10Q13118 480 aa11.47□□□□□ -0.57
CPSF6-204ENST00000547486 PIN1Q13526 163 aaPredicted RBP11.47□□□□□ -0.57
CPSF6-204ENST00000547486 MAD2L1BPQ15013 274 aaPredicted RBP11.47□□□□□ -0.57
CPSF6-204ENST00000547486 TRIP10Q15642 601 aa11.47□□□□□ -0.57
CPSF6-204ENST00000547486 ELFN2Q5R3F8 820 aa11.47□□□□□ -0.57
CPSF6-204ENST00000547486 OR8J3Q8NGG0 315 aa11.47□□□□□ -0.57
CPSF6-204ENST00000547486 C10orf82Q8WW14 230 aa11.47□□□□□ -0.57
CPSF6-204ENST00000547486 TMEM158Q8WZ71 300 aa11.47□□□□□ -0.57
CPSF6-204ENST00000547486 MCHR2Q969V1 340 aa11.47□□□□□ -0.57
CPSF6-204ENST00000547486 ZNF347Q96SE7 839 aa11.47□□□□□ -0.57
CPSF6-204ENST00000547486 ECSITQ9BQ95 431 aa11.47□□□□□ -0.57
CPSF6-204ENST00000547486 MRPL13Q9BYD1 178 aaKnown RBP11.47□□□□□ -0.57
CPSF6-204ENST00000547486 SAR1AQ9NR31 198 aa11.47□□□□□ -0.57
CPSF6-204ENST00000547486 RIMS3Q9UJD0 308 aa11.47□□□□□ -0.57
CPSF6-204ENST00000547486 KCNS2Q9ULS6 477 aa11.47□□□□□ -0.57
CPSF6-204ENST00000547486 SPEF1Q9Y4P9 236 aa11.47□□□□□ -0.57
CPSF6-204ENST00000547486 BCL10O95999 233 aa11.46□□□□□ -0.57
CPSF6-204ENST00000547486 HPXP02790 462 aa11.46□□□□□ -0.57
CPSF6-204ENST00000547486 ERCC1P07992 297 aaPredicted RBP11.46□□□□□ -0.57
CPSF6-204ENST00000547486 CCL2P13500 99 aa11.46□□□□□ -0.57
CPSF6-204ENST00000547486 AQP2P41181 271 aa11.46□□□□□ -0.57
CPSF6-204ENST00000547486 ARFIP2P53365 341 aa11.46□□□□□ -0.57
CPSF6-204ENST00000547486 MYBPC1Q00872 1141 aa11.46□□□□□ -0.57
CPSF6-204ENST00000547486 LAPTM4AQ15012 233 aa11.46□□□□□ -0.57
CPSF6-204ENST00000547486 GKAP1Q5VSY0 366 aaPredicted RBP11.46□□□□□ -0.57
CPSF6-204ENST00000547486 REP15Q6BDI9 236 aa11.46□□□□□ -0.57
CPSF6-204ENST00000547486 NANOGNBQ7Z5D8 188 aa11.46□□□□□ -0.57
CPSF6-204ENST00000547486 OR4K5Q8NGD3 323 aa11.46□□□□□ -0.57
CPSF6-204ENST00000547486 MOSPD2Q8NHP6 518 aa11.46□□□□□ -0.57
CPSF6-204ENST00000547486 RASSF5Q8WWW0 418 aa11.46□□□□□ -0.57
CPSF6-204ENST00000547486 SNX18Q96RF0 628 aa11.46□□□□□ -0.57
CPSF6-204ENST00000547486 SEPHS2Q99611 448 aa11.46□□□□□ -0.57
CPSF6-204ENST00000547486 SH3GL1Q99961 368 aa11.46□□□□□ -0.57
CPSF6-204ENST00000547486 REPIN1Q9BWE0 567 aaKnown RBP11.46□□□□□ -0.57
CPSF6-204ENST00000547486 FGFR1OP2Q9NVK5 253 aa11.46□□□□□ -0.57
CPSF6-204ENST00000547486 DUSP13Q9UII6 198 aa11.46□□□□□ -0.57
CPSF6-204ENST00000547486 MALRD1Q5VYJ5 2156 aa11.45□□□□□ -0.58
CPSF6-204ENST00000547486 M0R233 179 aa11.45□□□□□ -0.58
CPSF6-204ENST00000547486 MRASO14807 208 aa11.45□□□□□ -0.58
CPSF6-204ENST00000547486 OR7A10O76100 309 aa11.45□□□□□ -0.58
CPSF6-204ENST00000547486 OR5F1O95221 314 aa11.45□□□□□ -0.58
CPSF6-204ENST00000547486 NPPAP01160 153 aa11.45□□□□□ -0.58
CPSF6-204ENST00000547486 TSPAN19P0C672 248 aa11.45□□□□□ -0.58
CPSF6-204ENST00000547486 NAT2P11245 290 aa11.45□□□□□ -0.58
CPSF6-204ENST00000547486 ACADSP16219 412 aa11.45□□□□□ -0.58
CPSF6-204ENST00000547486 SRD5A1P18405 259 aa11.45□□□□□ -0.58
CPSF6-204ENST00000547486 APEX1P27695 318 aaKnown RBP11.45□□□□□ -0.58
CPSF6-204ENST00000547486 RBM34P42696 430 aaKnown RBP11.45□□□□□ -0.58
CPSF6-204ENST00000547486 CHN2P52757 468 aa11.45□□□□□ -0.58
CPSF6-204ENST00000547486 TAS2R41P59536 307 aa11.45□□□□□ -0.58
CPSF6-204ENST00000547486 GALK2Q01415 458 aa11.45□□□□□ -0.58
CPSF6-204ENST00000547486 KRTAP24-1Q3LI83 254 aa11.45□□□□□ -0.58
CPSF6-204ENST00000547486 MMEL1Q495T6 779 aa11.45□□□□□ -0.58
CPSF6-204ENST00000547486 COQ5Q5HYK3 327 aa11.45□□□□□ -0.58
CPSF6-204ENST00000547486 ARMC4Q5T2S8 1044 aa11.45□□□□□ -0.58
CPSF6-204ENST00000547486 DEF8Q6ZN54 512 aa11.45□□□□□ -0.58
CPSF6-204ENST00000547486 SYT14Q8NB59 555 aa11.45□□□□□ -0.58
CPSF6-204ENST00000547486 SLC30A7Q8NEW0 376 aa11.45□□□□□ -0.58
CPSF6-204ENST00000547486 TMEM239Q8WW34 195 aa11.45□□□□□ -0.58
CPSF6-204ENST00000547486 LIPHQ8WWY8 451 aa11.45□□□□□ -0.58
CPSF6-204ENST00000547486 ASB10Q8WXI3 467 aa11.45□□□□□ -0.58
CPSF6-204ENST00000547486 HPS1Q92902 700 aa11.45□□□□□ -0.58
CPSF6-204ENST00000547486 SGTBQ96EQ0 304 aa11.45□□□□□ -0.58
CPSF6-204ENST00000547486 MS4A5Q9H3V2 200 aa11.45□□□□□ -0.58
CPSF6-204ENST00000547486 ARGLU1Q9NWB6 273 aaPredicted RBP11.45□□□□□ -0.58
CPSF6-204ENST00000547486 GMPR2Q9P2T1 348 aaKnown RBP11.45□□□□□ -0.58
CPSF6-204ENST00000547486 SLC7A8Q9UHI5 535 aa11.45□□□□□ -0.58
CPSF6-204ENST00000547486 FBXL3Q9UKT7 428 aa11.45□□□□□ -0.58
CPSF6-204ENST00000547486 BAG5Q9UL15 447 aa11.45□□□□□ -0.58
CPSF6-204ENST00000547486 FBN3Q75N90 2809 aa11.45□□□□□ -0.58
CPSF6-204ENST00000547486 WNT9BO14905 357 aa11.44□□□□□ -0.58
CPSF6-204ENST00000547486 TRMUO75648 421 aaKnown RBP11.44□□□□□ -0.58
CPSF6-204ENST00000547486 CLPTM1O96005 669 aa11.44□□□□□ -0.58
CPSF6-204ENST00000547486 IGHG1P01857 330 aa11.44□□□□□ -0.58
CPSF6-204ENST00000547486 FAM157BP0CG42 384 aa11.44□□□□□ -0.58
CPSF6-204ENST00000547486 KDELR2P33947 212 aa11.44□□□□□ -0.58
CPSF6-204ENST00000547486 THBS2P35442 1172 aa11.44□□□□□ -0.58
CPSF6-204ENST00000547486 CLRN1P58418 232 aa11.44□□□□□ -0.58
CPSF6-204ENST00000547486 ERVS71-1P61550 626 aa11.44□□□□□ -0.58
CPSF6-204ENST00000547486 CR1LQ2VPA4 569 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms