RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 TTYH2Q9BSA4 534 aa14.04□□□□□ -0.16
TRAFD1-203ENST00000547063 LINC00470Q9BZP3 86 aa14.04□□□□□ -0.16
TRAFD1-203ENST00000547063 RACGAP1Q9H0H5 632 aa14.04□□□□□ -0.16
TRAFD1-203ENST00000547063 OR51V1Q9H2C8 321 aa14.04□□□□□ -0.16
TRAFD1-203ENST00000547063 SLCO5A1Q9H2Y9 848 aa14.04□□□□□ -0.16
TRAFD1-203ENST00000547063 GLTPQ9NZD2 209 aa14.04□□□□□ -0.16
TRAFD1-203ENST00000547063 TPRKBQ9Y3C4 175 aa14.04□□□□□ -0.16
TRAFD1-203ENST00000547063 E9PLN8 166 aa14.03□□□□□ -0.16
TRAFD1-203ENST00000547063 H7C1C5 153 aa14.03□□□□□ -0.16
TRAFD1-203ENST00000547063 SLC16A7O60669 478 aa14.03□□□□□ -0.16
TRAFD1-203ENST00000547063 KRT33AO76009 404 aa14.03□□□□□ -0.16
TRAFD1-203ENST00000547063 GUCA1AP43080 201 aaPredicted RBP14.03□□□□□ -0.16
TRAFD1-203ENST00000547063 SELENOPP49908 381 aa14.03□□□□□ -0.16
TRAFD1-203ENST00000547063 CHN2P52757 468 aa14.03□□□□□ -0.16
TRAFD1-203ENST00000547063 LCN6P62502 163 aa14.03□□□□□ -0.16
TRAFD1-203ENST00000547063 GLO1Q04760 184 aa14.03□□□□□ -0.16
TRAFD1-203ENST00000547063 RUNX1T1Q06455 604 aa14.03□□□□□ -0.16
TRAFD1-203ENST00000547063 POU4F2Q12837 409 aa14.03□□□□□ -0.16
TRAFD1-203ENST00000547063 GUSBP1Q15486 140 aa14.03□□□□□ -0.16
TRAFD1-203ENST00000547063 KLHL22Q53GT1 634 aa14.03□□□□□ -0.16
TRAFD1-203ENST00000547063 PLXDC2Q6UX71 529 aa14.03□□□□□ -0.16
TRAFD1-203ENST00000547063 ZBTB46Q86UZ6 589 aa14.03□□□□□ -0.16
TRAFD1-203ENST00000547063 PROKR2Q8NFJ6 384 aa14.03□□□□□ -0.16
TRAFD1-203ENST00000547063 OR9Q1Q8NGQ5 310 aa14.03□□□□□ -0.16
TRAFD1-203ENST00000547063 OR6K3Q8NGY3 331 aa14.03□□□□□ -0.16
TRAFD1-203ENST00000547063 VKORC1Q9BQB6 163 aa14.03□□□□□ -0.16
TRAFD1-203ENST00000547063 ULBP2Q9BZM5 246 aa14.03□□□□□ -0.16
TRAFD1-203ENST00000547063 NUAK2Q9H093 628 aa14.03□□□□□ -0.16
TRAFD1-203ENST00000547063 SRA1Q9HD15 236 aaKnown RBP14.03□□□□□ -0.16
TRAFD1-203ENST00000547063 FOXD3Q9UJU5 478 aaPredicted RBP14.03□□□□□ -0.16
TRAFD1-203ENST00000547063 CLEC4AQ9UMR7 237 aa14.03□□□□□ -0.16
TRAFD1-203ENST00000547063 MYRFQ9Y2G1 1151 aa14.03□□□□□ -0.16
TRAFD1-203ENST00000547063 MED12LQ86YW9 2145 aa14.03□□□□□ -0.16
TRAFD1-203ENST00000547063 SHANK1Q9Y566 2161 aa14.02□□□□□ -0.16
TRAFD1-203ENST00000547063 DOCK7Q96N67 2140 aa14.02□□□□□ -0.16
TRAFD1-203ENST00000547063 EFCAB10A6NFE3 127 aa14.02□□□□□ -0.17
TRAFD1-203ENST00000547063 HSPB2A8KAH6 182 aa14.02□□□□□ -0.17
TRAFD1-203ENST00000547063 SLC1A7O00341 560 aa14.02□□□□□ -0.17
TRAFD1-203ENST00000547063 FAM20BO75063 409 aa14.02□□□□□ -0.17
TRAFD1-203ENST00000547063 GLCEO94923 617 aa14.02□□□□□ -0.17
TRAFD1-203ENST00000547063 TNFAIP8O95379 198 aa14.02□□□□□ -0.17
TRAFD1-203ENST00000547063 CNOT4O95628 575 aaKnown RBP14.02□□□□□ -0.17
TRAFD1-203ENST00000547063 QDPRP09417 244 aa14.02□□□□□ -0.17
TRAFD1-203ENST00000547063 TMIGD3P0DMS9 266 aaPredicted RBP14.02□□□□□ -0.17
TRAFD1-203ENST00000547063 SLC2A5P22732 501 aa14.02□□□□□ -0.17
TRAFD1-203ENST00000547063 FMO3P31513 532 aa14.02□□□□□ -0.17
TRAFD1-203ENST00000547063 CEACAM8P31997 349 aaPredicted RBP14.02□□□□□ -0.17
TRAFD1-203ENST00000547063 MTNR1AP48039 350 aa14.02□□□□□ -0.17
TRAFD1-203ENST00000547063 ZNF84P51523 738 aa14.02□□□□□ -0.17
TRAFD1-203ENST00000547063 ZNF133P52736 654 aaPredicted RBP14.02□□□□□ -0.17
TRAFD1-203ENST00000547063 APOFQ13790 326 aa14.02□□□□□ -0.17
TRAFD1-203ENST00000547063 STK11Q15831 433 aa14.02□□□□□ -0.17
TRAFD1-203ENST00000547063 HSPB2Q16082 182 aa14.02□□□□□ -0.17
TRAFD1-203ENST00000547063 C10orf128Q5T292 105 aa14.02□□□□□ -0.17
TRAFD1-203ENST00000547063 OR6V1Q8N148 313 aa14.02□□□□□ -0.17
TRAFD1-203ENST00000547063 BBS1Q8NFJ9 593 aa14.02□□□□□ -0.17
TRAFD1-203ENST00000547063 BPIFB6Q8NFQ5 453 aa14.02□□□□□ -0.17
TRAFD1-203ENST00000547063 IPCEF1Q8WWN9 437 aaPredicted RBP14.02□□□□□ -0.17
TRAFD1-203ENST00000547063 MCHR2Q969V1 340 aa14.02□□□□□ -0.17
TRAFD1-203ENST00000547063 NMD3Q96D46 503 aaKnown RBP14.02□□□□□ -0.17
TRAFD1-203ENST00000547063 TEAD3Q99594 435 aa14.02□□□□□ -0.17
TRAFD1-203ENST00000547063 SFXN3Q9BWM7 321 aa14.02□□□□□ -0.17
TRAFD1-203ENST00000547063 HCAR1Q9BXC0 346 aa14.02□□□□□ -0.17
TRAFD1-203ENST00000547063 MED20Q9H944 212 aa14.02□□□□□ -0.17
TRAFD1-203ENST00000547063 CCNB1IP1Q9NPC3 277 aa14.02□□□□□ -0.17
TRAFD1-203ENST00000547063 HAO2Q9NYQ3 351 aa14.02□□□□□ -0.17
TRAFD1-203ENST00000547063 CNOT2Q9NZN8 540 aaKnown RBP14.02□□□□□ -0.17
TRAFD1-203ENST00000547063 UPB1Q9UBR1 384 aa14.02□□□□□ -0.17
TRAFD1-203ENST00000547063 TINAGQ9UJW2 476 aa14.02□□□□□ -0.17
TRAFD1-203ENST00000547063 B9D1Q9UPM9 204 aa14.02□□□□□ -0.17
TRAFD1-203ENST00000547063 PCDHGB1Q9Y5G3 927 aa14.02□□□□□ -0.17
TRAFD1-203ENST00000547063 COL6A6A6NMZ7 2263 aa14.02□□□□□ -0.17
TRAFD1-203ENST00000547063 ALPK2Q86TB3 2170 aa14.02□□□□□ -0.17
TRAFD1-203ENST00000547063 TRGV8A0A0C4DH27 118 aa14.01□□□□□ -0.17
TRAFD1-203ENST00000547063 GLI4P10075 376 aa14.01□□□□□ -0.17
TRAFD1-203ENST00000547063 CTSSP25774 331 aa14.01□□□□□ -0.17
TRAFD1-203ENST00000547063 ATP6V1E1P36543 226 aa14.01□□□□□ -0.17
TRAFD1-203ENST00000547063 CA7P43166 264 aa14.01□□□□□ -0.17
TRAFD1-203ENST00000547063 OR3A2P47893 321 aa14.01□□□□□ -0.17
TRAFD1-203ENST00000547063 ZNF91Q05481 1191 aa14.01□□□□□ -0.17
TRAFD1-203ENST00000547063 RAB40BQ12829 278 aa14.01□□□□□ -0.17
TRAFD1-203ENST00000547063 SMN1Q16637 294 aaKnown RBP14.01□□□□□ -0.17
TRAFD1-203ENST00000547063 SLC25A47Q6Q0C1 308 aa14.01□□□□□ -0.17
TRAFD1-203ENST00000547063 UGT2A3Q6UWM9 527 aa14.01□□□□□ -0.17
TRAFD1-203ENST00000547063 SEM1Q6ZVN7 128 aa14.01□□□□□ -0.17
TRAFD1-203ENST00000547063 BCDIN3DQ7Z5W3 292 aaKnown RBP14.01□□□□□ -0.17
TRAFD1-203ENST00000547063 GLB1L2Q8IW92 636 aa14.01□□□□□ -0.17
TRAFD1-203ENST00000547063 GCNT2Q8N0V5 402 aa14.01□□□□□ -0.17
TRAFD1-203ENST00000547063 CNEP1R1Q8N9A8 125 aa14.01□□□□□ -0.17
TRAFD1-203ENST00000547063 GALNT11Q8NCW6 608 aa14.01□□□□□ -0.17
TRAFD1-203ENST00000547063 ZNF540Q8NDQ6 660 aa14.01□□□□□ -0.17
TRAFD1-203ENST00000547063 OR6K6Q8NGW6 343 aa14.01□□□□□ -0.17
TRAFD1-203ENST00000547063 MYDGFQ969H8 173 aa14.01□□□□□ -0.17
TRAFD1-203ENST00000547063 RERGLQ9H628 205 aa14.01□□□□□ -0.17
TRAFD1-203ENST00000547063 AASSQ9UDR5 926 aa14.01□□□□□ -0.17
TRAFD1-203ENST00000547063 PRRC2CQ9Y520 2896 aaKnown RBP14.01□□□□□ -0.17
TRAFD1-203ENST00000547063 PHF3Q92576 2039 aaKnown RBP14.01□□□□□ -0.17
TRAFD1-203ENST00000547063 EPG5Q9HCE0 2579 aa14.01□□□□□ -0.17
TRAFD1-203ENST00000547063 IGLV1-36A0A0B4J1U3 117 aa14□□□□□ -0.17
TRAFD1-203ENST00000547063 ZNF587BE7ETH6 402 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms