RNA–Protein interactions for RNA: ENST00000546697.1

SSH1-204, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-204ENST00000546697 HEXAP06865 529 aa13.28□□□□□ -0.28
SSH1-204ENST00000546697 BMP4P12644 408 aa13.28□□□□□ -0.28
SSH1-204ENST00000546697 NR2C1P13056 603 aa13.28□□□□□ -0.28
SSH1-204ENST00000546697 ACADSP16219 412 aa13.28□□□□□ -0.28
SSH1-204ENST00000546697 MAKP20794 623 aa13.28□□□□□ -0.28
SSH1-204ENST00000546697 LIMS1P48059 325 aa13.28□□□□□ -0.28
SSH1-204ENST00000546697 MNAT1P51948 309 aa13.28□□□□□ -0.28
SSH1-204ENST00000546697 MRPS34P82930 218 aaKnown RBP13.28□□□□□ -0.28
SSH1-204ENST00000546697 MELKQ14680 651 aa13.28□□□□□ -0.28
SSH1-204ENST00000546697 ADIPOQQ15848 244 aa13.28□□□□□ -0.28
SSH1-204ENST00000546697 GSG1Q2KHT4 349 aa13.28□□□□□ -0.28
SSH1-204ENST00000546697 FAM205BPQ63HN1 556 aa13.28□□□□□ -0.28
SSH1-204ENST00000546697 FOXL2NBQ6ZUU3 175 aa13.28□□□□□ -0.28
SSH1-204ENST00000546697 NRMQ8IXM6 262 aa13.28□□□□□ -0.28
SSH1-204ENST00000546697 SLC22A24Q8N4F4 322 aa13.28□□□□□ -0.28
SSH1-204ENST00000546697 FITM2Q8N6M3 262 aa13.28□□□□□ -0.28
SSH1-204ENST00000546697 OR10H5Q8NGA6 315 aa13.28□□□□□ -0.28
SSH1-204ENST00000546697 MOSPD2Q8NHP6 518 aa13.28□□□□□ -0.28
SSH1-204ENST00000546697 ZNF519Q8TB69 540 aa13.28□□□□□ -0.28
SSH1-204ENST00000546697 NANOS1Q8WY41 292 aaKnown RBP13.28□□□□□ -0.28
SSH1-204ENST00000546697 MCHR2Q969V1 340 aa13.28□□□□□ -0.28
SSH1-204ENST00000546697 FAM162AQ96A26 154 aa13.28□□□□□ -0.28
SSH1-204ENST00000546697 CCT8L2Q96SF2 557 aa13.28□□□□□ -0.28
SSH1-204ENST00000546697 ALG12Q9BV10 488 aa13.28□□□□□ -0.28
SSH1-204ENST00000546697 CACNG6Q9BXT2 260 aa13.28□□□□□ -0.28
SSH1-204ENST00000546697 PLK3Q9H4B4 646 aa13.28□□□□□ -0.28
SSH1-204ENST00000546697 NOX3Q9HBY0 568 aa13.28□□□□□ -0.28
SSH1-204ENST00000546697 ATP23Q9Y6H3 246 aa13.28□□□□□ -0.28
SSH1-204ENST00000546697 TRIM64A6NGJ6 449 aa13.27□□□□□ -0.29
SSH1-204ENST00000546697 TRIM64BA6NI03 449 aa13.27□□□□□ -0.29
SSH1-204ENST00000546697 B9A039 149 aa13.27□□□□□ -0.29
SSH1-204ENST00000546697 H7C1Q1 480 aa13.27□□□□□ -0.29
SSH1-204ENST00000546697 PIP5K1CO60331 668 aa13.27□□□□□ -0.29
SSH1-204ENST00000546697 NDUFS7O75251 213 aa13.27□□□□□ -0.29
SSH1-204ENST00000546697 HLA-HP01893 362 aa13.27□□□□□ -0.29
SSH1-204ENST00000546697 F13BP05160 661 aa13.27□□□□□ -0.29
SSH1-204ENST00000546697 CELA3BP08861 270 aa13.27□□□□□ -0.29
SSH1-204ENST00000546697 QDPRP09417 244 aa13.27□□□□□ -0.29
SSH1-204ENST00000546697 OR8G3PP0DMU2 310 aa13.27□□□□□ -0.29
SSH1-204ENST00000546697 IFI30P13284 250 aa13.27□□□□□ -0.29
SSH1-204ENST00000546697 B4GALT1P15291 398 aa13.27□□□□□ -0.29
SSH1-204ENST00000546697 NCK1P16333 377 aa13.27□□□□□ -0.29
SSH1-204ENST00000546697 EVX1P49640 407 aa13.27□□□□□ -0.29
SSH1-204ENST00000546697 DSCR9P59020 149 aa13.27□□□□□ -0.29
SSH1-204ENST00000546697 TUBA1BP68363 451 aa13.27□□□□□ -0.29
SSH1-204ENST00000546697 TUBA4AP68366 448 aa13.27□□□□□ -0.29
SSH1-204ENST00000546697 VLDLRP98155 873 aa13.27□□□□□ -0.29
SSH1-204ENST00000546697 CHRNB3Q05901 458 aa13.27□□□□□ -0.29
SSH1-204ENST00000546697 LAPTM4AQ15012 233 aa13.27□□□□□ -0.29
SSH1-204ENST00000546697 CLEC12BQ2HXU8 276 aa13.27□□□□□ -0.29
SSH1-204ENST00000546697 ALG10Q5BKT4 473 aa13.27□□□□□ -0.29
SSH1-204ENST00000546697 TUBA1AQ71U36 451 aa13.27□□□□□ -0.29
SSH1-204ENST00000546697 FKBP9P1Q75LS8 142 aa13.27□□□□□ -0.29
SSH1-204ENST00000546697 ZNF584Q8IVC4 421 aa13.27□□□□□ -0.29
SSH1-204ENST00000546697 SKA3Q8IX90 412 aa13.27□□□□□ -0.29
SSH1-204ENST00000546697 ARHGAP24Q8N264 748 aa13.27□□□□□ -0.29
SSH1-204ENST00000546697 GPX7Q96SL4 187 aaPredicted RBP13.27□□□□□ -0.29
SSH1-204ENST00000546697 GSX1Q9H4S2 264 aaPredicted RBP13.27□□□□□ -0.29
SSH1-204ENST00000546697 EGFL7Q9UHF1 273 aa13.27□□□□□ -0.29
SSH1-204ENST00000546697 TMEM5Q9Y2B1 443 aa13.27□□□□□ -0.29
SSH1-204ENST00000546697 UGT2A1Q9Y4X1 527 aa13.27□□□□□ -0.29
SSH1-204ENST00000546697 CSPG4Q6UVK1 2322 aa13.27□□□□□ -0.29
SSH1-204ENST00000546697 CDC42EP2O14613 210 aa13.26□□□□□ -0.29
SSH1-204ENST00000546697 AHCYL1O43865 530 aa13.26□□□□□ -0.29
SSH1-204ENST00000546697 PTP4A3O75365 173 aa13.26□□□□□ -0.29
SSH1-204ENST00000546697 SERPINI2O75830 405 aa13.26□□□□□ -0.29
SSH1-204ENST00000546697 SEC14L2O76054 403 aa13.26□□□□□ -0.29
SSH1-204ENST00000546697 SERPINA5P05154 406 aa13.26□□□□□ -0.29
SSH1-204ENST00000546697 MMP7P09237 267 aaPredicted RBP13.26□□□□□ -0.29
SSH1-204ENST00000546697 NR4A1P22736 598 aa13.26□□□□□ -0.29
SSH1-204ENST00000546697 SERPINF1P36955 418 aa13.26□□□□□ -0.29
SSH1-204ENST00000546697 PPOXP50336 477 aa13.26□□□□□ -0.29
SSH1-204ENST00000546697 IDH3GP51553 393 aaPredicted RBP13.26□□□□□ -0.29
SSH1-204ENST00000546697 RPL27P61353 136 aaKnown RBP13.26□□□□□ -0.29
SSH1-204ENST00000546697 RAB1AP62820 205 aa13.26□□□□□ -0.29
SSH1-204ENST00000546697 KRTAP1-1Q07627 177 aa13.26□□□□□ -0.29
SSH1-204ENST00000546697 TNK1Q13470 666 aa13.26□□□□□ -0.29
SSH1-204ENST00000546697 C16orf89Q6UX73 402 aa13.26□□□□□ -0.29
SSH1-204ENST00000546697 FAM122BQ7Z309 247 aa13.26□□□□□ -0.29
SSH1-204ENST00000546697 CYP4Z1Q86W10 505 aa13.26□□□□□ -0.29
SSH1-204ENST00000546697 FAM86B1Q8N7N1 296 aa13.26□□□□□ -0.29
SSH1-204ENST00000546697 RBM15BQ8NDT2 890 aaKnown RBP13.26□□□□□ -0.29
SSH1-204ENST00000546697 HDAC2Q92769 488 aaKnown RBP13.26□□□□□ -0.29
SSH1-204ENST00000546697 PYURFQ96I23 114 aa13.26□□□□□ -0.29
SSH1-204ENST00000546697 ZNF347Q96SE7 839 aa13.26□□□□□ -0.29
SSH1-204ENST00000546697 KCNS3Q9BQ31 491 aa13.26□□□□□ -0.29
SSH1-204ENST00000546697 ADA2Q9NZK5 511 aa13.26□□□□□ -0.29
SSH1-204ENST00000546697 RHCGQ9UBD6 479 aa13.26□□□□□ -0.29
SSH1-204ENST00000546697 GDF2Q9UK05 429 aaPredicted RBP13.26□□□□□ -0.29
SSH1-204ENST00000546697 FN1P02751 2386 aaKnown RBP13.25□□□□□ -0.29
SSH1-204ENST00000546697 TMEM129A0AVI4 362 aa13.25□□□□□ -0.29
SSH1-204ENST00000546697 ICMTO60725 284 aa13.25□□□□□ -0.29
SSH1-204ENST00000546697 SNAP29O95721 258 aa13.25□□□□□ -0.29
SSH1-204ENST00000546697 F12P00748 615 aaPredicted RBP13.25□□□□□ -0.29
SSH1-204ENST00000546697 H1F0P07305 194 aaKnown RBP13.25□□□□□ -0.29
SSH1-204ENST00000546697 ZNF26P17031 533 aaPredicted RBP13.25□□□□□ -0.29
SSH1-204ENST00000546697 ITGA2P17301 1181 aa13.25□□□□□ -0.29
SSH1-204ENST00000546697 HOXB4P17483 251 aaPredicted RBP13.25□□□□□ -0.29
SSH1-204ENST00000546697 NPR2P20594 1047 aa13.25□□□□□ -0.29
SSH1-204ENST00000546697 ACVR1BP36896 505 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms