RNA–Protein interactions for RNA: ENST00000546534.1

SCAF11-208, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-208ENST00000546534 CDH20Q9HBT6 801 aa10.78□□□□□ -0.68
SCAF11-208ENST00000546534 SLC6A13Q9NSD5 602 aa10.78□□□□□ -0.68
SCAF11-208ENST00000546534 RPS6KB2Q9UBS0 482 aa10.78□□□□□ -0.68
SCAF11-208ENST00000546534 MMP24Q9Y5R2 645 aa10.78□□□□□ -0.68
SCAF11-208ENST00000546534 SOX21Q9Y651 276 aaPredicted RBP10.78□□□□□ -0.68
SCAF11-208ENST00000546534 ZNF726A6NNF4 738 aa10.77□□□□□ -0.69
SCAF11-208ENST00000546534 ITM2AO43736 263 aa10.77□□□□□ -0.69
SCAF11-208ENST00000546534 UBOX5O94941 541 aa10.77□□□□□ -0.69
SCAF11-208ENST00000546534 KRT75O95678 551 aa10.77□□□□□ -0.69
SCAF11-208ENST00000546534 KNG1P01042 644 aa10.77□□□□□ -0.69
SCAF11-208ENST00000546534 IGHV1-46P01743 117 aa10.77□□□□□ -0.69
SCAF11-208ENST00000546534 MT-ND5P03915 603 aa10.77□□□□□ -0.69
SCAF11-208ENST00000546534 ZNF12P17014 697 aa10.77□□□□□ -0.69
SCAF11-208ENST00000546534 ZNF81P51508 661 aa10.77□□□□□ -0.69
SCAF11-208ENST00000546534 CRISP3P54108 245 aa10.77□□□□□ -0.69
SCAF11-208ENST00000546534 UCP2P55851 309 aa10.77□□□□□ -0.69
SCAF11-208ENST00000546534 NME5P56597 212 aa10.77□□□□□ -0.69
SCAF11-208ENST00000546534 UFM1P61960 85 aa10.77□□□□□ -0.69
SCAF11-208ENST00000546534 HNRNPA0Q13151 305 aaKnown RBP10.77□□□□□ -0.69
SCAF11-208ENST00000546534 MOGQ16653 247 aa10.77□□□□□ -0.69
SCAF11-208ENST00000546534 C16orf87Q6PH81 154 aa10.77□□□□□ -0.69
SCAF11-208ENST00000546534 C5orf46Q6UWT4 87 aa10.77□□□□□ -0.69
SCAF11-208ENST00000546534 WDR88Q6ZMY6 472 aa10.77□□□□□ -0.69
SCAF11-208ENST00000546534 JAZF1Q86VZ6 243 aa10.77□□□□□ -0.69
SCAF11-208ENST00000546534 SLC22A24Q8N4F4 322 aa10.77□□□□□ -0.69
SCAF11-208ENST00000546534 ICA1LQ8NDH6 482 aa10.77□□□□□ -0.69
SCAF11-208ENST00000546534 TCP10LQ8TDR4 215 aa10.77□□□□□ -0.69
SCAF11-208ENST00000546534 UBLCP1Q8WVY7 318 aaPredicted RBP10.77□□□□□ -0.69
SCAF11-208ENST00000546534 WFDC12Q8WWY7 111 aa10.77□□□□□ -0.69
SCAF11-208ENST00000546534 TMEM19Q96HH6 336 aa10.77□□□□□ -0.69
SCAF11-208ENST00000546534 C16orf45Q96MC5 204 aaPredicted RBP10.77□□□□□ -0.69
SCAF11-208ENST00000546534 OR52E6Q96RD3 313 aa10.77□□□□□ -0.69
SCAF11-208ENST00000546534 CCT8L2Q96SF2 557 aa10.77□□□□□ -0.69
SCAF11-208ENST00000546534 SH3GL3Q99963 347 aa10.77□□□□□ -0.69
SCAF11-208ENST00000546534 MS4A7Q9GZW8 240 aaPredicted RBP10.77□□□□□ -0.69
SCAF11-208ENST00000546534 C12orf10Q9HB07 376 aa10.77□□□□□ -0.69
SCAF11-208ENST00000546534 TCF7L2Q9NQB0 619 aa10.77□□□□□ -0.69
SCAF11-208ENST00000546534 WNK1Q9H4A3 2382 aa10.76□□□□□ -0.69
SCAF11-208ENST00000546534 IGHV3OR16-10A0A075B7F0 116 aa10.76□□□□□ -0.69
SCAF11-208ENST00000546534 A0A0G2JPF8 293 aa10.76□□□□□ -0.69
SCAF11-208ENST00000546534 A0A1B0GWA3 101 aa10.76□□□□□ -0.69
SCAF11-208ENST00000546534 TLDC2A0PJX2 215 aa10.76□□□□□ -0.69
SCAF11-208ENST00000546534 HNRNPCL2B2RXH8 293 aa10.76□□□□□ -0.69
SCAF11-208ENST00000546534 HNRNPCL3B7ZW38 293 aa10.76□□□□□ -0.69
SCAF11-208ENST00000546534 SPRY3O43610 288 aa10.76□□□□□ -0.69
SCAF11-208ENST00000546534 HNRNPCL1O60812 293 aaKnown RBP10.76□□□□□ -0.69
SCAF11-208ENST00000546534 SERPINI2O75830 405 aa10.76□□□□□ -0.69
SCAF11-208ENST00000546534 SNAP29O95721 258 aa10.76□□□□□ -0.69
SCAF11-208ENST00000546534 GPANK1O95872 356 aa10.76□□□□□ -0.69
SCAF11-208ENST00000546534 IGHV3-13P01766 116 aa10.76□□□□□ -0.69
SCAF11-208ENST00000546534 BGLAPP02818 100 aa10.76□□□□□ -0.69
SCAF11-208ENST00000546534 BPGMP07738 259 aa10.76□□□□□ -0.69
SCAF11-208ENST00000546534 HNRNPCL4P0DMR1 293 aa10.76□□□□□ -0.69
SCAF11-208ENST00000546534 DRD4P21917 467 aa10.76□□□□□ -0.69
SCAF11-208ENST00000546534 IL12AP29459 219 aa10.76□□□□□ -0.69
SCAF11-208ENST00000546534 CRATP43155 626 aa10.76□□□□□ -0.69
SCAF11-208ENST00000546534 CSNK1A1P48729 337 aa10.76□□□□□ -0.69
SCAF11-208ENST00000546534 TNP2Q05952 138 aa10.76□□□□□ -0.69
SCAF11-208ENST00000546534 PUDPQ08623 228 aa10.76□□□□□ -0.69
SCAF11-208ENST00000546534 PMS2P3Q13401 168 aa10.76□□□□□ -0.69
SCAF11-208ENST00000546534 FAM209AQ5JX71 171 aa10.76□□□□□ -0.69
SCAF11-208ENST00000546534 C17orf107Q6ZR85 190 aa10.76□□□□□ -0.69
SCAF11-208ENST00000546534 KIR3DL3Q8N743 410 aa10.76□□□□□ -0.69
SCAF11-208ENST00000546534 ZNF781Q8N8C0 355 aa10.76□□□□□ -0.69
SCAF11-208ENST00000546534 BCL2L14Q9BZR8 327 aa10.76□□□□□ -0.69
SCAF11-208ENST00000546534 MMP27Q9H306 513 aa10.76□□□□□ -0.69
SCAF11-208ENST00000546534 RNF121Q9H920 327 aa10.76□□□□□ -0.69
SCAF11-208ENST00000546534 CACYBPQ9HB71 228 aaKnown RBP10.76□□□□□ -0.69
SCAF11-208ENST00000546534 NPHS2Q9NP85 383 aa10.76□□□□□ -0.69
SCAF11-208ENST00000546534 DCAF16Q9NXF7 216 aa10.76□□□□□ -0.69
SCAF11-208ENST00000546534 TESQ9UGI8 421 aaKnown RBP10.76□□□□□ -0.69
SCAF11-208ENST00000546534 POLR3KQ9Y2Y1 108 aaPredicted RBP10.76□□□□□ -0.69
SCAF11-208ENST00000546534 IFT52Q9Y366 437 aa10.76□□□□□ -0.69
SCAF11-208ENST00000546534 INSIG2Q9Y5U4 225 aa10.76□□□□□ -0.69
SCAF11-208ENST00000546534 A0A1B0GUS0 222 aa10.75□□□□□ -0.69
SCAF11-208ENST00000546534 LRRN3E7EW58 273 aa10.75□□□□□ -0.69
SCAF11-208ENST00000546534 TM9SF1O15321 606 aa10.75□□□□□ -0.69
SCAF11-208ENST00000546534 MFN2O95140 757 aa10.75□□□□□ -0.69
SCAF11-208ENST00000546534 IGHMP01871 453 aa10.75□□□□□ -0.69
SCAF11-208ENST00000546534 SBK2P0C263 348 aa10.75□□□□□ -0.69
SCAF11-208ENST00000546534 IGHV4-38-2P0DP08 117 aa10.75□□□□□ -0.69
SCAF11-208ENST00000546534 LBPP18428 481 aa10.75□□□□□ -0.69
SCAF11-208ENST00000546534 HTR2AP28223 471 aa10.75□□□□□ -0.69
SCAF11-208ENST00000546534 RBMXP38159 391 aaKnown RBP10.75□□□□□ -0.69
SCAF11-208ENST00000546534 MTNR1AP48039 350 aa10.75□□□□□ -0.69
SCAF11-208ENST00000546534 MMP15P51511 669 aa10.75□□□□□ -0.69
SCAF11-208ENST00000546534 DSTNP60981 165 aa10.75□□□□□ -0.69
SCAF11-208ENST00000546534 SEC61A1P61619 476 aaKnown RBP10.75□□□□□ -0.69
SCAF11-208ENST00000546534 SLC3A1Q07837 685 aa10.75□□□□□ -0.69
SCAF11-208ENST00000546534 TBC1D28Q2M2D7 210 aa10.75□□□□□ -0.69
SCAF11-208ENST00000546534 SPRNQ5BIV9 151 aa10.75□□□□□ -0.69
SCAF11-208ENST00000546534 TMEM255AQ5JRV8 349 aa10.75□□□□□ -0.69
SCAF11-208ENST00000546534 LCE2CQ5TA81 110 aa10.75□□□□□ -0.69
SCAF11-208ENST00000546534 RHOUQ7L0Q8 258 aa10.75□□□□□ -0.69
SCAF11-208ENST00000546534 SCAIQ8N9R8 606 aa10.75□□□□□ -0.69
SCAF11-208ENST00000546534 BHLHE22Q8NFJ8 381 aaPredicted RBP10.75□□□□□ -0.69
SCAF11-208ENST00000546534 OR1J1Q8NGS3 322 aa10.75□□□□□ -0.69
SCAF11-208ENST00000546534 OR6S1Q8NH40 331 aa10.75□□□□□ -0.69
SCAF11-208ENST00000546534 TMEM54Q969K7 222 aa10.75□□□□□ -0.69
SCAF11-208ENST00000546534 SLC35B4Q969S0 331 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms