RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 OAFQ86UD1 273 aa10.33□□□□□ -0.76
YBX3-217ENST00000546164 CDK20Q8IZL9 346 aa10.33□□□□□ -0.76
YBX3-217ENST00000546164 NOXO1Q8NFA2 376 aa10.33□□□□□ -0.76
YBX3-217ENST00000546164 BCAS4Q8TDM0 211 aa10.33□□□□□ -0.76
YBX3-217ENST00000546164 MUC13Q9H3R2 512 aa10.33□□□□□ -0.76
YBX3-217ENST00000546164 SMURF2Q9HAU4 748 aa10.33□□□□□ -0.76
YBX3-217ENST00000546164 IL1RAPQ9NPH3 570 aa10.33□□□□□ -0.76
YBX3-217ENST00000546164 DLL4Q9NR61 685 aa10.33□□□□□ -0.76
YBX3-217ENST00000546164 TMEM38BQ9NVV0 291 aa10.33□□□□□ -0.76
YBX3-217ENST00000546164 ZNF224Q9NZL3 707 aa10.33□□□□□ -0.76
YBX3-217ENST00000546164 POU2F3Q9UKI9 436 aa10.33□□□□□ -0.76
YBX3-217ENST00000546164 PRPF19Q9UMS4 504 aaKnown RBP10.33□□□□□ -0.76
YBX3-217ENST00000546164 TRBV4-1A0A0J9YWV2 114 aa10.32□□□□□ -0.76
YBX3-217ENST00000546164 hCG_2039718K7EN88 272 aa10.32□□□□□ -0.76
YBX3-217ENST00000546164 CDC42EP2O14613 210 aa10.32□□□□□ -0.76
YBX3-217ENST00000546164 MGRN1O60291 552 aa10.32□□□□□ -0.76
YBX3-217ENST00000546164 TRMUO75648 421 aaKnown RBP10.32□□□□□ -0.76
YBX3-217ENST00000546164 CRYAAP02489 173 aa10.32□□□□□ -0.76
YBX3-217ENST00000546164 QDPRP09417 244 aa10.32□□□□□ -0.76
YBX3-217ENST00000546164 NR2C1P13056 603 aa10.32□□□□□ -0.76
YBX3-217ENST00000546164 CD99P14209 185 aa10.32□□□□□ -0.76
YBX3-217ENST00000546164 B4GALT1P15291 398 aa10.32□□□□□ -0.76
YBX3-217ENST00000546164 FOSL1P15407 271 aa10.32□□□□□ -0.76
YBX3-217ENST00000546164 LIMS1P48059 325 aa10.32□□□□□ -0.76
YBX3-217ENST00000546164 CLRN1P58418 232 aa10.32□□□□□ -0.76
YBX3-217ENST00000546164 SMIM11AP58511 58 aa10.32□□□□□ -0.76
YBX3-217ENST00000546164 RPL27P61353 136 aaKnown RBP10.32□□□□□ -0.76
YBX3-217ENST00000546164 FGD3Q5JSP0 725 aa10.32□□□□□ -0.76
YBX3-217ENST00000546164 C10orf128Q5T292 105 aa10.32□□□□□ -0.76
YBX3-217ENST00000546164 C11orf71Q6IPW1 123 aa10.32□□□□□ -0.76
YBX3-217ENST00000546164 LCN8Q6JVE9 175 aa10.32□□□□□ -0.76
YBX3-217ENST00000546164 RINLQ6ZS11 566 aa10.32□□□□□ -0.76
YBX3-217ENST00000546164 RRM2BQ7LG56 351 aa10.32□□□□□ -0.76
YBX3-217ENST00000546164 TRPM8Q7Z2W7 1104 aa10.32□□□□□ -0.76
YBX3-217ENST00000546164 DPPA2Q7Z7J5 298 aa10.32□□□□□ -0.76
YBX3-217ENST00000546164 MDP1Q86V88 176 aa10.32□□□□□ -0.76
YBX3-217ENST00000546164 IL17RDQ8NFM7 739 aa10.32□□□□□ -0.76
YBX3-217ENST00000546164 OR13C2Q8NGS9 318 aa10.32□□□□□ -0.76
YBX3-217ENST00000546164 OR51A7Q8NH64 312 aa10.32□□□□□ -0.76
YBX3-217ENST00000546164 FNDC8Q8TC99 324 aa10.32□□□□□ -0.76
YBX3-217ENST00000546164 NANOS1Q8WY41 292 aaKnown RBP10.32□□□□□ -0.76
YBX3-217ENST00000546164 MCHR2Q969V1 340 aa10.32□□□□□ -0.76
YBX3-217ENST00000546164 MCUR1Q96AQ8 359 aa10.32□□□□□ -0.76
YBX3-217ENST00000546164 PERPQ96FX8 193 aa10.32□□□□□ -0.76
YBX3-217ENST00000546164 ZNF75AQ96N20 296 aa10.32□□□□□ -0.76
YBX3-217ENST00000546164 TNFRSF13CQ96RJ3 184 aa10.32□□□□□ -0.76
YBX3-217ENST00000546164 ZNF347Q96SE7 839 aa10.32□□□□□ -0.76
YBX3-217ENST00000546164 ALG12Q9BV10 488 aa10.32□□□□□ -0.76
YBX3-217ENST00000546164 HEATR1Q9H583 2144 aaKnown RBP10.32□□□□□ -0.76
YBX3-217ENST00000546164 CBLN4Q9NTU7 201 aa10.32□□□□□ -0.76
YBX3-217ENST00000546164 TAS2R1Q9NYW7 299 aa10.32□□□□□ -0.76
YBX3-217ENST00000546164 MOKQ9UQ07 419 aa10.32□□□□□ -0.76
YBX3-217ENST00000546164 V9GYQ6 96 aa10.32□□□□□ -0.76
YBX3-217ENST00000546164 SETD2Q9BYW2 2564 aaPredicted RBP10.32□□□□□ -0.76
YBX3-217ENST00000546164 TRAV27A0A087WT01 109 aa10.31□□□□□ -0.76
YBX3-217ENST00000546164 PTP4A3O75365 173 aa10.31□□□□□ -0.76
YBX3-217ENST00000546164 DIRAS1O95057 198 aa10.31□□□□□ -0.76
YBX3-217ENST00000546164 UBL3O95164 117 aa10.31□□□□□ -0.76
YBX3-217ENST00000546164 HLA-HP01893 362 aa10.31□□□□□ -0.76
YBX3-217ENST00000546164 FABP3P05413 133 aa10.31□□□□□ -0.76
YBX3-217ENST00000546164 OR8G3PP0DMU2 310 aa10.31□□□□□ -0.76
YBX3-217ENST00000546164 ATP6V1B2P21281 511 aa10.31□□□□□ -0.76
YBX3-217ENST00000546164 APOBEC3AP31941 199 aaPredicted RBP10.31□□□□□ -0.76
YBX3-217ENST00000546164 MAGEA2P43356 314 aa10.31□□□□□ -0.76
YBX3-217ENST00000546164 GPR4P46093 362 aa10.31□□□□□ -0.76
YBX3-217ENST00000546164 CAPZA2P47755 286 aa10.31□□□□□ -0.76
YBX3-217ENST00000546164 OMPP47874 163 aa10.31□□□□□ -0.76
YBX3-217ENST00000546164 IDH3GP51553 393 aaPredicted RBP10.31□□□□□ -0.76
YBX3-217ENST00000546164 ATP5J2P56134 94 aa10.31□□□□□ -0.76
YBX3-217ENST00000546164 CTXN1P60606 82 aa10.31□□□□□ -0.76
YBX3-217ENST00000546164 TRIM25Q14258 630 aaKnown RBP10.31□□□□□ -0.76
YBX3-217ENST00000546164 SEC23BQ15437 767 aa10.31□□□□□ -0.76
YBX3-217ENST00000546164 ETFDHQ16134 617 aa10.31□□□□□ -0.76
YBX3-217ENST00000546164 GSG1Q2KHT4 349 aa10.31□□□□□ -0.76
YBX3-217ENST00000546164 ZBED5Q49AG3 693 aa10.31□□□□□ -0.76
YBX3-217ENST00000546164 MYPOPQ86VE0 399 aaPredicted RBP10.31□□□□□ -0.76
YBX3-217ENST00000546164 MEX3DQ86XN8 651 aaKnown RBP10.31□□□□□ -0.76
YBX3-217ENST00000546164 FBXL14Q8N1E6 418 aa10.31□□□□□ -0.76
YBX3-217ENST00000546164 MUC15Q8N387 334 aa10.31□□□□□ -0.76
YBX3-217ENST00000546164 SLC22A24Q8N4F4 322 aa10.31□□□□□ -0.76
YBX3-217ENST00000546164 SYT14Q8NB59 555 aa10.31□□□□□ -0.76
YBX3-217ENST00000546164 NUP37Q8NFH4 326 aa10.31□□□□□ -0.76
YBX3-217ENST00000546164 OR4F15Q8NGB8 312 aa10.31□□□□□ -0.76
YBX3-217ENST00000546164 OR4K5Q8NGD3 323 aa10.31□□□□□ -0.76
YBX3-217ENST00000546164 ZNF519Q8TB69 540 aa10.31□□□□□ -0.76
YBX3-217ENST00000546164 HDAC2Q92769 488 aaKnown RBP10.31□□□□□ -0.76
YBX3-217ENST00000546164 POP5Q969H6 163 aaKnown RBP10.31□□□□□ -0.76
YBX3-217ENST00000546164 GTPBP3Q969Y2 492 aaKnown RBP10.31□□□□□ -0.76
YBX3-217ENST00000546164 TRMT61AQ96FX7 289 aaKnown RBP10.31□□□□□ -0.76
YBX3-217ENST00000546164 GPX7Q96SL4 187 aaPredicted RBP10.31□□□□□ -0.76
YBX3-217ENST00000546164 KCNS3Q9BQ31 491 aa10.31□□□□□ -0.76
YBX3-217ENST00000546164 SEC61A2Q9H9S3 476 aa10.31□□□□□ -0.76
YBX3-217ENST00000546164 NOX3Q9HBY0 568 aa10.31□□□□□ -0.76
YBX3-217ENST00000546164 KRCC1Q9NPI7 259 aaPredicted RBP10.31□□□□□ -0.76
YBX3-217ENST00000546164 FBXL3Q9UKT7 428 aa10.31□□□□□ -0.76
YBX3-217ENST00000546164 ZNF346Q9UL40 294 aaKnown RBP10.31□□□□□ -0.76
YBX3-217ENST00000546164 ATP23Q9Y6H3 246 aa10.31□□□□□ -0.76
YBX3-217ENST00000546164 IGHV2OR16-5A0A0B4J2B6 119 aa10.3□□□□□ -0.76
YBX3-217ENST00000546164 TCRBV5S2A0A599 114 aa10.3□□□□□ -0.76
YBX3-217ENST00000546164 SH3PXD2BA1X283 911 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms