RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 MESTQ5EB52 335 aa17.96■□□□□ 0.47
HMGA2-211ENST00000545998 C17orf78Q8N4C9 275 aa17.96■□□□□ 0.47
HMGA2-211ENST00000545998 MCHR2Q969V1 340 aa17.96■□□□□ 0.47
HMGA2-211ENST00000545998 RASD2Q96D21 266 aa17.96■□□□□ 0.47
HMGA2-211ENST00000545998 NMD3Q96D46 503 aaKnown RBP17.96■□□□□ 0.47
HMGA2-211ENST00000545998 CENPNQ96H22 339 aaPredicted RBP17.96■□□□□ 0.47
HMGA2-211ENST00000545998 PLA2G12AQ9BZM1 189 aa17.96■□□□□ 0.47
HMGA2-211ENST00000545998 NELFAQ9H3P2 528 aa17.96■□□□□ 0.47
HMGA2-211ENST00000545998 ZNF226Q9NYT6 803 aa17.96■□□□□ 0.47
HMGA2-211ENST00000545998 TEX13CA0A0J9YWL9 993 aa17.96■□□□□ 0.46
HMGA2-211ENST00000545998 PPP1R3DO95685 299 aa17.96■□□□□ 0.46
HMGA2-211ENST00000545998 IGFBP1P08833 259 aaPredicted RBP17.96■□□□□ 0.46
HMGA2-211ENST00000545998 ANXA8P13928 327 aa17.96■□□□□ 0.46
HMGA2-211ENST00000545998 CRYGSP22914 178 aa17.96■□□□□ 0.46
HMGA2-211ENST00000545998 ANKRD16Q6P6B7 361 aa17.96■□□□□ 0.46
HMGA2-211ENST00000545998 KLHL17Q6TDP4 642 aa17.96■□□□□ 0.46
HMGA2-211ENST00000545998 HIPK1Q86Z02 1210 aa17.96■□□□□ 0.46
HMGA2-211ENST00000545998 OR8D4Q8NGM9 314 aa17.96■□□□□ 0.46
HMGA2-211ENST00000545998 MAGEE2Q8TD90 523 aaPredicted RBP17.96■□□□□ 0.46
HMGA2-211ENST00000545998 BCL2L2Q92843 193 aaPredicted RBP17.96■□□□□ 0.46
HMGA2-211ENST00000545998 PKP2Q99959 881 aa17.96■□□□□ 0.46
HMGA2-211ENST00000545998 IFT27Q9BW83 186 aa17.96■□□□□ 0.46
HMGA2-211ENST00000545998 SEMA6AQ9H2E6 1030 aa17.96■□□□□ 0.46
HMGA2-211ENST00000545998 SLC17A5Q9NRA2 495 aa17.96■□□□□ 0.46
HMGA2-211ENST00000545998 REV1Q9UBZ9 1251 aa17.96■□□□□ 0.46
HMGA2-211ENST00000545998 CACNA1DQ01668 2161 aa17.95■□□□□ 0.46
HMGA2-211ENST00000545998 ERICH4A6NGS2 130 aa17.95■□□□□ 0.46
HMGA2-211ENST00000545998 IMPA2O14732 288 aa17.95■□□□□ 0.46
HMGA2-211ENST00000545998 ARPC3O15145 178 aa17.95■□□□□ 0.46
HMGA2-211ENST00000545998 ARHGEF9O43307 516 aa17.95■□□□□ 0.46
HMGA2-211ENST00000545998 MYBPC1Q00872 1141 aa17.95■□□□□ 0.46
HMGA2-211ENST00000545998 KRR1Q13601 381 aaKnown RBP17.95■□□□□ 0.46
HMGA2-211ENST00000545998 HIKESHIQ53FT3 197 aa17.95■□□□□ 0.46
HMGA2-211ENST00000545998 FAHD1Q6P587 224 aa17.95■□□□□ 0.46
HMGA2-211ENST00000545998 ZNF627Q7L945 461 aa17.95■□□□□ 0.46
HMGA2-211ENST00000545998 WDR31Q8NA23 367 aa17.95■□□□□ 0.46
HMGA2-211ENST00000545998 C14orf79Q96F83 325 aa17.95■□□□□ 0.46
HMGA2-211ENST00000545998 ERMAPQ96PL5 475 aaPredicted RBP17.95■□□□□ 0.46
HMGA2-211ENST00000545998 S100A14Q9HCY8 104 aa17.95■□□□□ 0.46
HMGA2-211ENST00000545998 SLC25A15Q9Y619 301 aa17.95■□□□□ 0.46
HMGA2-211ENST00000545998 CSMD2Q7Z408 3487 aa17.94■□□□□ 0.46
HMGA2-211ENST00000545998 G3V2T6 193 aa17.94■□□□□ 0.46
HMGA2-211ENST00000545998 BHLHE40O14503 412 aa17.94■□□□□ 0.46
HMGA2-211ENST00000545998 XKRYO14609 159 aa17.94■□□□□ 0.46
HMGA2-211ENST00000545998 CASKO14936 926 aa17.94■□□□□ 0.46
HMGA2-211ENST00000545998 DHHO43323 396 aa17.94■□□□□ 0.46
HMGA2-211ENST00000545998 SOX14O95416 240 aa17.94■□□□□ 0.46
HMGA2-211ENST00000545998 ZNF23P17027 643 aa17.94■□□□□ 0.46
HMGA2-211ENST00000545998 FMODQ06828 376 aa17.94■□□□□ 0.46
HMGA2-211ENST00000545998 CD47Q08722 323 aa17.94■□□□□ 0.46
HMGA2-211ENST00000545998 PPA1Q15181 289 aa17.94■□□□□ 0.46
HMGA2-211ENST00000545998 TBRG1Q3YBR2 411 aa17.94■□□□□ 0.46
HMGA2-211ENST00000545998 CLEC12AQ5QGZ9 265 aa17.94■□□□□ 0.46
HMGA2-211ENST00000545998 THEM4Q5T1C6 240 aa17.94■□□□□ 0.46
HMGA2-211ENST00000545998 C10orf128Q5T292 105 aa17.94■□□□□ 0.46
HMGA2-211ENST00000545998 SEZ6L2Q6UXD5 910 aa17.94■□□□□ 0.46
HMGA2-211ENST00000545998 ZDHHC13Q8IUH4 622 aa17.94■□□□□ 0.46
HMGA2-211ENST00000545998 SVOPLQ8N434 492 aa17.94■□□□□ 0.46
HMGA2-211ENST00000545998 ATG16L2Q8NAA4 619 aa17.94■□□□□ 0.46
HMGA2-211ENST00000545998 OR52L1Q8NGH7 329 aa17.94■□□□□ 0.46
HMGA2-211ENST00000545998 FNDC8Q8TC99 324 aa17.94■□□□□ 0.46
HMGA2-211ENST00000545998 MUCL1Q96DR8 90 aa17.94■□□□□ 0.46
HMGA2-211ENST00000545998 ZNF556Q9HAH1 456 aa17.94■□□□□ 0.46
HMGA2-211ENST00000545998 SMURF2Q9HAU4 748 aa17.94■□□□□ 0.46
HMGA2-211ENST00000545998 POFUT2Q9Y2G5 429 aa17.94■□□□□ 0.46
HMGA2-211ENST00000545998 CADP27708 2225 aa17.94■□□□□ 0.46
HMGA2-211ENST00000545998 A0A096LPE4 126 aa17.93■□□□□ 0.46
HMGA2-211ENST00000545998 IGKV1D-43A0A0B4J1Z2 117 aa17.93■□□□□ 0.46
HMGA2-211ENST00000545998 A0A1W2PPZ6 126 aa17.93■□□□□ 0.46
HMGA2-211ENST00000545998 FAM221AA4D161 298 aa17.93■□□□□ 0.46
HMGA2-211ENST00000545998 PRSS37A4D1T9 235 aa17.93■□□□□ 0.46
HMGA2-211ENST00000545998 A6NNC1 897 aa17.93■□□□□ 0.46
HMGA2-211ENST00000545998 H7C1C5 153 aa17.93■□□□□ 0.46
HMGA2-211ENST00000545998 SOCS2O14508 198 aa17.93■□□□□ 0.46
HMGA2-211ENST00000545998 SIAH2O43255 324 aa17.93■□□□□ 0.46
HMGA2-211ENST00000545998 IDH3BO43837 385 aa17.93■□□□□ 0.46
HMGA2-211ENST00000545998 AHCYL1O43865 530 aa17.93■□□□□ 0.46
HMGA2-211ENST00000545998 SEC14L2O76054 403 aa17.93■□□□□ 0.46
HMGA2-211ENST00000545998 SLC2A10O95528 541 aa17.93■□□□□ 0.46
HMGA2-211ENST00000545998 NR2C1P13056 603 aa17.93■□□□□ 0.46
HMGA2-211ENST00000545998 LCN6P62502 163 aa17.93■□□□□ 0.46
HMGA2-211ENST00000545998 SSX8Q7RTT4 187 aa17.93■□□□□ 0.46
HMGA2-211ENST00000545998 ADCK1Q86TW2 530 aa17.93■□□□□ 0.46
HMGA2-211ENST00000545998 WFDC8Q8IUA0 241 aa17.93■□□□□ 0.46
HMGA2-211ENST00000545998 OR52N5Q8NH56 324 aa17.93■□□□□ 0.46
HMGA2-211ENST00000545998 RBP7Q96R05 134 aa17.93■□□□□ 0.46
HMGA2-211ENST00000545998 FOXB1Q99853 325 aa17.93■□□□□ 0.46
HMGA2-211ENST00000545998 GABARAPL1Q9H0R8 117 aa17.93■□□□□ 0.46
HMGA2-211ENST00000545998 TBC1D23Q9NUY8 699 aa17.93■□□□□ 0.46
HMGA2-211ENST00000545998 AMDHD2Q9Y303 409 aa17.93■□□□□ 0.46
HMGA2-211ENST00000545998 CSMD1Q96PZ7 3565 aa17.93■□□□□ 0.46
HMGA2-211ENST00000545998 A0A1W2PR80 420 aa17.92■□□□□ 0.46
HMGA2-211ENST00000545998 SLC22A23A1A5C7 686 aa17.92■□□□□ 0.46
HMGA2-211ENST00000545998 PRF1P14222 555 aa17.92■□□□□ 0.46
HMGA2-211ENST00000545998 HOXC12P31275 282 aa17.92■□□□□ 0.46
HMGA2-211ENST00000545998 DAPP51397 102 aa17.92■□□□□ 0.46
HMGA2-211ENST00000545998 SLC36A3Q495N2 470 aa17.92■□□□□ 0.46
HMGA2-211ENST00000545998 C1QTNF12Q5T7M4 302 aa17.92■□□□□ 0.46
HMGA2-211ENST00000545998 ALKBH2Q6NS38 261 aa17.92■□□□□ 0.46
HMGA2-211ENST00000545998 SLC25A47Q6Q0C1 308 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms