RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 HTR2AP28223 471 aa12.43□□□□□ -0.42
RTN3-214ENST00000545432 SLC6A9P48067 706 aa12.43□□□□□ -0.42
RTN3-214ENST00000545432 ZNF81P51508 661 aa12.43□□□□□ -0.42
RTN3-214ENST00000545432 UFM1P61960 85 aa12.43□□□□□ -0.42
RTN3-214ENST00000545432 PAX2Q02962 417 aa12.43□□□□□ -0.42
RTN3-214ENST00000545432 PUDPQ08623 228 aa12.43□□□□□ -0.42
RTN3-214ENST00000545432 RBBP4Q09028 425 aa12.43□□□□□ -0.42
RTN3-214ENST00000545432 ARMCX4Q5H9R4 360 aa12.43□□□□□ -0.42
RTN3-214ENST00000545432 TMEM255AQ5JRV8 349 aa12.43□□□□□ -0.42
RTN3-214ENST00000545432 FAM91A1Q658Y4 838 aa12.43□□□□□ -0.42
RTN3-214ENST00000545432 ZNF781Q8N8C0 355 aa12.43□□□□□ -0.42
RTN3-214ENST00000545432 OR6N1Q8NGY5 312 aa12.43□□□□□ -0.42
RTN3-214ENST00000545432 OR6X1Q8NH79 312 aa12.43□□□□□ -0.42
RTN3-214ENST00000545432 ST7LQ8TDW4 575 aa12.43□□□□□ -0.42
RTN3-214ENST00000545432 DNAJA4Q8WW22 397 aaPredicted RBP12.43□□□□□ -0.42
RTN3-214ENST00000545432 CCL17Q92583 94 aa12.43□□□□□ -0.42
RTN3-214ENST00000545432 TMEM19Q96HH6 336 aa12.43□□□□□ -0.42
RTN3-214ENST00000545432 PATZ1Q9HBE1 687 aaKnown RBP12.43□□□□□ -0.42
RTN3-214ENST00000545432 THUMPD1Q9NXG2 353 aaKnown RBP12.43□□□□□ -0.42
RTN3-214ENST00000545432 ZNF726A6NNF4 738 aa12.42□□□□□ -0.42
RTN3-214ENST00000545432 F5H0A9 414 aaPredicted RBP12.42□□□□□ -0.42
RTN3-214ENST00000545432 PLATP00750 562 aa12.42□□□□□ -0.42
RTN3-214ENST00000545432 PTHP01270 115 aa12.42□□□□□ -0.42
RTN3-214ENST00000545432 MYZAPP0CAP1 466 aa12.42□□□□□ -0.42
RTN3-214ENST00000545432 MTNR1AP48039 350 aa12.42□□□□□ -0.42
RTN3-214ENST00000545432 DSTNP60981 165 aa12.42□□□□□ -0.42
RTN3-214ENST00000545432 SRSF4Q08170 494 aaKnown RBP12.42□□□□□ -0.42
RTN3-214ENST00000545432 PMS2P3Q13401 168 aa12.42□□□□□ -0.42
RTN3-214ENST00000545432 TMEM155Q4W5P6 130 aa12.42□□□□□ -0.42
RTN3-214ENST00000545432 RPS26P11Q5JNZ5 115 aaPredicted RBP12.42□□□□□ -0.42
RTN3-214ENST00000545432 OR1J2Q8NGS2 313 aa12.42□□□□□ -0.42
RTN3-214ENST00000545432 OR52E6Q96RD3 313 aa12.42□□□□□ -0.42
RTN3-214ENST00000545432 C20orf27Q9GZN8 174 aa12.42□□□□□ -0.42
RTN3-214ENST00000545432 TMEM38BQ9NVV0 291 aa12.42□□□□□ -0.42
RTN3-214ENST00000545432 AIG1Q9NVV5 245 aa12.42□□□□□ -0.42
RTN3-214ENST00000545432 GLTPQ9NZD2 209 aa12.42□□□□□ -0.42
RTN3-214ENST00000545432 RAP2CQ9Y3L5 183 aa12.42□□□□□ -0.42
RTN3-214ENST00000545432 NPTNQ9Y639 398 aa12.42□□□□□ -0.42
RTN3-214ENST00000545432 SMIM23A6NLE4 172 aa12.41□□□□□ -0.42
RTN3-214ENST00000545432 DHHO43323 396 aa12.41□□□□□ -0.42
RTN3-214ENST00000545432 TYROBPO43914 113 aa12.41□□□□□ -0.42
RTN3-214ENST00000545432 MGRN1O60291 552 aa12.41□□□□□ -0.42
RTN3-214ENST00000545432 MT-ND5P03915 603 aa12.41□□□□□ -0.42
RTN3-214ENST00000545432 LCKP06239 509 aa12.41□□□□□ -0.42
RTN3-214ENST00000545432 MMP7P09237 267 aaPredicted RBP12.41□□□□□ -0.42
RTN3-214ENST00000545432 ALDOCP09972 364 aaKnown RBP12.41□□□□□ -0.42
RTN3-214ENST00000545432 BMP2P12643 396 aa12.41□□□□□ -0.42
RTN3-214ENST00000545432 CCL2P13500 99 aa12.41□□□□□ -0.42
RTN3-214ENST00000545432 CSNK1A1P48729 337 aa12.41□□□□□ -0.42
RTN3-214ENST00000545432 HIST3H3Q16695 136 aa12.41□□□□□ -0.42
RTN3-214ENST00000545432 TSTQ16762 297 aaKnown RBP12.41□□□□□ -0.42
RTN3-214ENST00000545432 ULK3Q6PHR2 472 aa12.41□□□□□ -0.42
RTN3-214ENST00000545432 LRRC28Q86X40 367 aaPredicted RBP12.41□□□□□ -0.42
RTN3-214ENST00000545432 CPEB3Q8NE35 698 aaKnown RBP12.41□□□□□ -0.42
RTN3-214ENST00000545432 DACT3Q96B18 629 aaPredicted RBP12.41□□□□□ -0.42
RTN3-214ENST00000545432 SLC47A1Q96FL8 570 aa12.41□□□□□ -0.42
RTN3-214ENST00000545432 MARS2Q96GW9 593 aaKnown RBP12.41□□□□□ -0.42
RTN3-214ENST00000545432 PPP1R36Q96LQ0 422 aa12.41□□□□□ -0.42
RTN3-214ENST00000545432 MOGAT1Q96PD6 335 aa12.41□□□□□ -0.42
RTN3-214ENST00000545432 PKP2Q99959 881 aa12.41□□□□□ -0.42
RTN3-214ENST00000545432 MEAF6Q9HAF1 191 aa12.41□□□□□ -0.42
RTN3-214ENST00000545432 TPT1P8Q9HAU6 139 aa12.41□□□□□ -0.42
RTN3-214ENST00000545432 CDH20Q9HBT6 801 aa12.41□□□□□ -0.42
RTN3-214ENST00000545432 NPHS2Q9NP85 383 aa12.41□□□□□ -0.42
RTN3-214ENST00000545432 LGALS13Q9UHV8 139 aa12.41□□□□□ -0.42
RTN3-214ENST00000545432 RFXANKO14593 260 aa12.4□□□□□ -0.42
RTN3-214ENST00000545432 ICMTO60725 284 aa12.4□□□□□ -0.42
RTN3-214ENST00000545432 SPAG7O75391 227 aa12.4□□□□□ -0.42
RTN3-214ENST00000545432 NDUFA7O95182 113 aa12.4□□□□□ -0.42
RTN3-214ENST00000545432 ETS2P15036 469 aa12.4□□□□□ -0.42
RTN3-214ENST00000545432 NQO1P15559 274 aaKnown RBP12.4□□□□□ -0.42
RTN3-214ENST00000545432 CBLP22681 906 aa12.4□□□□□ -0.42
RTN3-214ENST00000545432 CPT2P23786 658 aa12.4□□□□□ -0.42
RTN3-214ENST00000545432 PRKAR1BP31321 381 aa12.4□□□□□ -0.42
RTN3-214ENST00000545432 CD80P33681 288 aa12.4□□□□□ -0.42
RTN3-214ENST00000545432 LIPAP38571 399 aa12.4□□□□□ -0.42
RTN3-214ENST00000545432 CRATP43155 626 aa12.4□□□□□ -0.42
RTN3-214ENST00000545432 RPL14P50914 215 aaKnown RBP12.4□□□□□ -0.42
RTN3-214ENST00000545432 TBC1D28Q2M2D7 210 aa12.4□□□□□ -0.42
RTN3-214ENST00000545432 SPRNQ5BIV9 151 aa12.4□□□□□ -0.42
RTN3-214ENST00000545432 ALG10BQ5I7T1 473 aa12.4□□□□□ -0.42
RTN3-214ENST00000545432 MBNL2Q5VZF2 373 aaKnown RBP12.4□□□□□ -0.42
RTN3-214ENST00000545432 ASPHD2Q6ICH7 369 aa12.4□□□□□ -0.42
RTN3-214ENST00000545432 DHRS4L2Q6PKH6 230 aa12.4□□□□□ -0.42
RTN3-214ENST00000545432 LINC00114Q6XXX2 140 aa12.4□□□□□ -0.42
RTN3-214ENST00000545432 COMTD1Q86VU5 262 aa12.4□□□□□ -0.42
RTN3-214ENST00000545432 UBLCP1Q8WVY7 318 aaPredicted RBP12.4□□□□□ -0.42
RTN3-214ENST00000545432 UPRTQ96BW1 309 aa12.4□□□□□ -0.42
RTN3-214ENST00000545432 SORT1Q99523 831 aa12.4□□□□□ -0.42
RTN3-214ENST00000545432 EPYCQ99645 322 aa12.4□□□□□ -0.42
RTN3-214ENST00000545432 SH3GL3Q99963 347 aa12.4□□□□□ -0.42
RTN3-214ENST00000545432 TMEM43Q9BTV4 400 aa12.4□□□□□ -0.42
RTN3-214ENST00000545432 ASPNQ9BXN1 380 aa12.4□□□□□ -0.42
RTN3-214ENST00000545432 BEX1Q9HBH7 125 aa12.4□□□□□ -0.42
RTN3-214ENST00000545432 RPS6KB2Q9UBS0 482 aa12.4□□□□□ -0.42
RTN3-214ENST00000545432 A0A0B4J2E0 115 aa12.39□□□□□ -0.43
RTN3-214ENST00000545432 A0A1B0GX12 115 aa12.39□□□□□ -0.43
RTN3-214ENST00000545432 ZSCAN5BA6NJL1 495 aa12.39□□□□□ -0.43
RTN3-214ENST00000545432 M0QZ24 198 aa12.39□□□□□ -0.43
RTN3-214ENST00000545432 TPD52L2O43399 206 aaKnown RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms