RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 KLHL14Q9P2G3 628 aa7.9□□□□□ -1.14
CHD4-212ENST00000545083 PRDM4Q9UKN5 801 aa7.9□□□□□ -1.14
CHD4-212ENST00000545083 NPTNQ9Y639 398 aa7.9□□□□□ -1.14
CHD4-212ENST00000545083 NOTCH3Q9UM47 2321 aa7.9□□□□□ -1.15
CHD4-212ENST00000545083 A0A087WUJ7 227 aa7.89□□□□□ -1.15
CHD4-212ENST00000545083 F5H0A9 414 aaPredicted RBP7.89□□□□□ -1.15
CHD4-212ENST00000545083 PIN1P1O15428 100 aa7.89□□□□□ -1.15
CHD4-212ENST00000545083 OR2T1O43869 369 aa7.89□□□□□ -1.15
CHD4-212ENST00000545083 SHBGP04278 402 aa7.89□□□□□ -1.15
CHD4-212ENST00000545083 FAM153BP0C7A2 387 aa7.89□□□□□ -1.15
CHD4-212ENST00000545083 DRD4P21917 467 aa7.89□□□□□ -1.15
CHD4-212ENST00000545083 CDKN2CP42773 168 aa7.89□□□□□ -1.15
CHD4-212ENST00000545083 CKAP4Q07065 602 aaKnown RBP7.89□□□□□ -1.15
CHD4-212ENST00000545083 SLC3A1Q07837 685 aa7.89□□□□□ -1.15
CHD4-212ENST00000545083 MAD2L1Q13257 205 aaPredicted RBP7.89□□□□□ -1.15
CHD4-212ENST00000545083 PMS2P3Q13401 168 aa7.89□□□□□ -1.15
CHD4-212ENST00000545083 HLXQ14774 488 aaPredicted RBP7.89□□□□□ -1.15
CHD4-212ENST00000545083 SMU1Q2TAY7 513 aa7.89□□□□□ -1.15
CHD4-212ENST00000545083 SPATA46Q5T0L3 261 aa7.89□□□□□ -1.15
CHD4-212ENST00000545083 C6orf89Q6UWU4 347 aa7.89□□□□□ -1.15
CHD4-212ENST00000545083 BRD3OSQ6XYD6 125 aa7.89□□□□□ -1.15
CHD4-212ENST00000545083 PIWIL3Q7Z3Z3 882 aaKnown RBP7.89□□□□□ -1.15
CHD4-212ENST00000545083 LRRC34Q8IZ02 419 aa7.89□□□□□ -1.15
CHD4-212ENST00000545083 SLC22A24Q8N4F4 322 aa7.89□□□□□ -1.15
CHD4-212ENST00000545083 OR1J1Q8NGS3 322 aa7.89□□□□□ -1.15
CHD4-212ENST00000545083 IPCEF1Q8WWN9 437 aaPredicted RBP7.89□□□□□ -1.15
CHD4-212ENST00000545083 UPRTQ96BW1 309 aa7.89□□□□□ -1.15
CHD4-212ENST00000545083 PPP1R36Q96LQ0 422 aa7.89□□□□□ -1.15
CHD4-212ENST00000545083 CCDC115Q96NT0 180 aa7.89□□□□□ -1.15
CHD4-212ENST00000545083 DIRC2Q96SL1 478 aa7.89□□□□□ -1.15
CHD4-212ENST00000545083 TXLNGYQ9BZA5 131 aa7.89□□□□□ -1.15
CHD4-212ENST00000545083 BCL2L14Q9BZR8 327 aa7.89□□□□□ -1.15
CHD4-212ENST00000545083 SLC6A13Q9NSD5 602 aa7.89□□□□□ -1.15
CHD4-212ENST00000545083 RNF114Q9Y508 228 aa7.89□□□□□ -1.15
CHD4-212ENST00000545083 TANC2Q9HCD6 1990 aa7.88□□□□□ -1.15
CHD4-212ENST00000545083 TRAV36DV7A0A075B6V5 113 aa7.88□□□□□ -1.15
CHD4-212ENST00000545083 CCDC154A6NI56 674 aa7.88□□□□□ -1.15
CHD4-212ENST00000545083 ZNF726A6NNF4 738 aa7.88□□□□□ -1.15
CHD4-212ENST00000545083 SRRM5B3KS81 715 aa7.88□□□□□ -1.15
CHD4-212ENST00000545083 LRRN3E7EW58 273 aa7.88□□□□□ -1.15
CHD4-212ENST00000545083 SERPINI2O75830 405 aa7.88□□□□□ -1.15
CHD4-212ENST00000545083 CLPXO76031 633 aa7.88□□□□□ -1.15
CHD4-212ENST00000545083 BGLAPP02818 100 aa7.88□□□□□ -1.15
CHD4-212ENST00000545083 MT-ND5P03915 603 aa7.88□□□□□ -1.15
CHD4-212ENST00000545083 CRYBA1P05813 215 aa7.88□□□□□ -1.15
CHD4-212ENST00000545083 BCHEP06276 602 aa7.88□□□□□ -1.15
CHD4-212ENST00000545083 NQO1P15559 274 aaKnown RBP7.88□□□□□ -1.15
CHD4-212ENST00000545083 KRT4P19013 534 aa7.88□□□□□ -1.15
CHD4-212ENST00000545083 WNT5AP41221 380 aa7.88□□□□□ -1.15
CHD4-212ENST00000545083 CSNK1A1P48729 337 aa7.88□□□□□ -1.15
CHD4-212ENST00000545083 MVDP53602 400 aa7.88□□□□□ -1.15
CHD4-212ENST00000545083 PROK1P58294 105 aa7.88□□□□□ -1.15
CHD4-212ENST00000545083 ZMYND11Q15326 602 aa7.88□□□□□ -1.15
CHD4-212ENST00000545083 MOGQ16653 247 aa7.88□□□□□ -1.15
CHD4-212ENST00000545083 TMEM155Q4W5P6 130 aa7.88□□□□□ -1.15
CHD4-212ENST00000545083 LRFN4Q6PJG9 635 aa7.88□□□□□ -1.15
CHD4-212ENST00000545083 ZNF101Q8IZC7 436 aa7.88□□□□□ -1.15
CHD4-212ENST00000545083 CNPY4Q8N129 248 aa7.88□□□□□ -1.15
CHD4-212ENST00000545083 SPICQ8N5J4 248 aa7.88□□□□□ -1.15
CHD4-212ENST00000545083 POU5F2Q8N7G0 328 aa7.88□□□□□ -1.15
CHD4-212ENST00000545083 VPS37AQ8NEZ2 397 aa7.88□□□□□ -1.15
CHD4-212ENST00000545083 LINC01006Q8NI28 216 aa7.88□□□□□ -1.15
CHD4-212ENST00000545083 SLC38A4Q969I6 547 aa7.88□□□□□ -1.15
CHD4-212ENST00000545083 TMEM54Q969K7 222 aa7.88□□□□□ -1.15
CHD4-212ENST00000545083 ZDHHC16Q969W1 377 aa7.88□□□□□ -1.15
CHD4-212ENST00000545083 DACT3Q96B18 629 aaPredicted RBP7.88□□□□□ -1.15
CHD4-212ENST00000545083 TEX37Q96LM6 180 aa7.88□□□□□ -1.15
CHD4-212ENST00000545083 SPATA9Q9BWV2 254 aa7.88□□□□□ -1.15
CHD4-212ENST00000545083 AKTIPQ9H8T0 292 aa7.88□□□□□ -1.15
CHD4-212ENST00000545083 TMEM106BQ9NUM4 274 aa7.88□□□□□ -1.15
CHD4-212ENST00000545083 TMEM38BQ9NVV0 291 aa7.88□□□□□ -1.15
CHD4-212ENST00000545083 BTNL2Q9UIR0 455 aa7.88□□□□□ -1.15
CHD4-212ENST00000545083 GPR45Q9Y5Y3 372 aa7.88□□□□□ -1.15
CHD4-212ENST00000545083 A0A1B0GWA3 101 aa7.87□□□□□ -1.15
CHD4-212ENST00000545083 SMIM23A6NLE4 172 aa7.87□□□□□ -1.15
CHD4-212ENST00000545083 C3orf80F5H4A9 247 aa7.87□□□□□ -1.15
CHD4-212ENST00000545083 H0YL77 283 aa7.87□□□□□ -1.15
CHD4-212ENST00000545083 ADH4P08319 380 aa7.87□□□□□ -1.15
CHD4-212ENST00000545083 PPIAL4GP0DN37 164 aa7.87□□□□□ -1.15
CHD4-212ENST00000545083 VSIG8P0DPA2 414 aa7.87□□□□□ -1.15
CHD4-212ENST00000545083 THRBP10828 461 aa7.87□□□□□ -1.15
CHD4-212ENST00000545083 ETFAP13804 333 aa7.87□□□□□ -1.15
CHD4-212ENST00000545083 HTR2AP28223 471 aa7.87□□□□□ -1.15
CHD4-212ENST00000545083 S100A3P33764 101 aa7.87□□□□□ -1.15
CHD4-212ENST00000545083 ANXA11P50995 505 aaKnown RBP7.87□□□□□ -1.15
CHD4-212ENST00000545083 BIDP55957 195 aa7.87□□□□□ -1.15
CHD4-212ENST00000545083 TXNL4AP83876 142 aaKnown RBP7.87□□□□□ -1.15
CHD4-212ENST00000545083 LARS2Q15031 903 aaKnown RBP7.87□□□□□ -1.15
CHD4-212ENST00000545083 TBC1D28Q2M2D7 210 aa7.87□□□□□ -1.15
CHD4-212ENST00000545083 THEM4Q5T1C6 240 aa7.87□□□□□ -1.15
CHD4-212ENST00000545083 KPRPQ5T749 579 aaPredicted RBP7.87□□□□□ -1.15
CHD4-212ENST00000545083 SAMD5Q5TGI4 173 aa7.87□□□□□ -1.15
CHD4-212ENST00000545083 C5orf46Q6UWT4 87 aa7.87□□□□□ -1.15
CHD4-212ENST00000545083 Q6YL49 198 aa7.87□□□□□ -1.15
CHD4-212ENST00000545083 ZNF621Q6ZSS3 439 aa7.87□□□□□ -1.15
CHD4-212ENST00000545083 NET1Q7Z628 596 aaPredicted RBP7.87□□□□□ -1.15
CHD4-212ENST00000545083 COMTD1Q86VU5 262 aa7.87□□□□□ -1.15
CHD4-212ENST00000545083 LRRC28Q86X40 367 aaPredicted RBP7.87□□□□□ -1.15
CHD4-212ENST00000545083 SNX32Q86XE0 403 aa7.87□□□□□ -1.15
CHD4-212ENST00000545083 KLHL36Q8N4N3 616 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms