RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 ZNRF4Q8WWF5 429 aa14.26□□□□□ -0.13
CHD4-210ENST00000544040 MED17Q9NVC6 651 aa14.26□□□□□ -0.13
CHD4-210ENST00000544040 FUCA1P04066 466 aa14.25□□□□□ -0.13
CHD4-210ENST00000544040 ETV6P41212 452 aa14.25□□□□□ -0.13
CHD4-210ENST00000544040 DCXRQ7Z4W1 244 aa14.25□□□□□ -0.13
CHD4-210ENST00000544040 TMEM123Q8N131 208 aa14.25□□□□□ -0.13
CHD4-210ENST00000544040 DPF1Q92782 380 aa14.25□□□□□ -0.13
CHD4-210ENST00000544040 DDOQ99489 341 aa14.25□□□□□ -0.13
CHD4-210ENST00000544040 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.25□□□□□ -0.13
CHD4-210ENST00000544040 MT-ND4LP03901 98 aa14.25□□□□□ -0.13
CHD4-210ENST00000544040 RAB38P57729 211 aa14.25□□□□□ -0.13
CHD4-210ENST00000544040 GABREP78334 506 aa14.25□□□□□ -0.13
CHD4-210ENST00000544040 CLEC12BQ2HXU8 276 aa14.25□□□□□ -0.13
CHD4-210ENST00000544040 ADGRE4PQ86SQ3 457 aa14.25□□□□□ -0.13
CHD4-210ENST00000544040 AMDHD1Q96NU7 426 aa14.25□□□□□ -0.13
CHD4-210ENST00000544040 CXorf36Q9H7Y0 433 aa14.25□□□□□ -0.13
CHD4-210ENST00000544040 ANKRD10Q9NXR5 420 aa14.25□□□□□ -0.13
CHD4-210ENST00000544040 SHPRHQ149N8 1683 aa14.25□□□□□ -0.13
CHD4-210ENST00000544040 BLACEA4D250 179 aa14.25□□□□□ -0.13
CHD4-210ENST00000544040 OR6C68A6NDL8 312 aa14.25□□□□□ -0.13
CHD4-210ENST00000544040 AQP7P3A6NL99 342 aa14.25□□□□□ -0.13
CHD4-210ENST00000544040 CPN1P15169 458 aa14.25□□□□□ -0.13
CHD4-210ENST00000544040 TRIM23P36406 574 aa14.25□□□□□ -0.13
CHD4-210ENST00000544040 SRPXP78539 464 aa14.25□□□□□ -0.13
CHD4-210ENST00000544040 TAGLNQ01995 201 aaKnown RBP14.25□□□□□ -0.13
CHD4-210ENST00000544040 MED25Q71SY5 747 aa14.25□□□□□ -0.13
CHD4-210ENST00000544040 SLC35D1Q9NTN3 355 aa14.25□□□□□ -0.13
CHD4-210ENST00000544040 ACSS1Q9NUB1 689 aaPredicted RBP14.25□□□□□ -0.13
CHD4-210ENST00000544040 FITM1A5D6W6 292 aa14.25□□□□□ -0.13
CHD4-210ENST00000544040 H3BNC9 293 aa14.25□□□□□ -0.13
CHD4-210ENST00000544040 H3BQ06 376 aaPredicted RBP14.25□□□□□ -0.13
CHD4-210ENST00000544040 EID2Q8N6I1 236 aa14.25□□□□□ -0.13
CHD4-210ENST00000544040 FAM71CQ8NEG0 241 aa14.25□□□□□ -0.13
CHD4-210ENST00000544040 EMG1Q92979 244 aaKnown RBP14.25□□□□□ -0.13
CHD4-210ENST00000544040 AK3Q9UIJ7 227 aa14.25□□□□□ -0.13
CHD4-210ENST00000544040 SCRG1O75711 98 aa14.25□□□□□ -0.13
CHD4-210ENST00000544040 CNIH1O95406 144 aa14.25□□□□□ -0.13
CHD4-210ENST00000544040 HENMT1Q5T8I9 393 aaKnown RBP14.25□□□□□ -0.13
CHD4-210ENST00000544040 LYSMD4Q5XG99 296 aa14.25□□□□□ -0.13
CHD4-210ENST00000544040 ZFP62Q8NB50 900 aaPredicted RBP14.25□□□□□ -0.13
CHD4-210ENST00000544040 ZNF583Q96ND8 569 aa14.25□□□□□ -0.13
CHD4-210ENST00000544040 CA3P07451 260 aa14.24□□□□□ -0.13
CHD4-210ENST00000544040 METTL15P1P0C7V9 234 aa14.24□□□□□ -0.13
CHD4-210ENST00000544040 CD46P15529 392 aa14.24□□□□□ -0.13
CHD4-210ENST00000544040 OR2B8PP59922 312 aa14.24□□□□□ -0.13
CHD4-210ENST00000544040 ANGPTL5Q86XS5 388 aa14.24□□□□□ -0.13
CHD4-210ENST00000544040 SHARPINQ9H0F6 387 aa14.24□□□□□ -0.13
CHD4-210ENST00000544040 SPACA1Q9HBV2 294 aa14.24□□□□□ -0.13
CHD4-210ENST00000544040 ZNF732B4DXR9 585 aa14.24□□□□□ -0.13
CHD4-210ENST00000544040 LGI1O95970 557 aa14.24□□□□□ -0.13
CHD4-210ENST00000544040 DRD1P21728 446 aa14.24□□□□□ -0.13
CHD4-210ENST00000544040 UBE2G1P62253 170 aa14.24□□□□□ -0.13
CHD4-210ENST00000544040 OPN5Q6U736 354 aa14.24□□□□□ -0.13
CHD4-210ENST00000544040 RFLNAQ6ZTI6 216 aa14.24□□□□□ -0.13
CHD4-210ENST00000544040 MARCH3Q86UD3 253 aa14.24□□□□□ -0.13
CHD4-210ENST00000544040 THNSL2Q86YJ6 484 aa14.24□□□□□ -0.13
CHD4-210ENST00000544040 OR5AS1Q8N127 324 aa14.24□□□□□ -0.13
CHD4-210ENST00000544040 PTDSS2Q9BVG9 487 aa14.24□□□□□ -0.13
CHD4-210ENST00000544040 ISYNA1Q9NPH2 558 aa14.24□□□□□ -0.13
CHD4-210ENST00000544040 RNF186Q9NXI6 227 aa14.24□□□□□ -0.13
CHD4-210ENST00000544040 MED1Q15648 1581 aaPredicted RBP14.24□□□□□ -0.13
CHD4-210ENST00000544040 NEURL4Q96JN8 1562 aa14.24□□□□□ -0.13
CHD4-210ENST00000544040 TRAV36DV7A0A075B6V5 113 aa14.24□□□□□ -0.13
CHD4-210ENST00000544040 ZNF865P0CJ78 1059 aaPredicted RBP14.24□□□□□ -0.13
CHD4-210ENST00000544040 RPS19P39019 145 aaKnown RBP14.24□□□□□ -0.13
CHD4-210ENST00000544040 ZMAT1Q5H9K5 638 aa14.24□□□□□ -0.13
CHD4-210ENST00000544040 LSMEM2Q8N112 164 aa14.24□□□□□ -0.13
CHD4-210ENST00000544040 CPXM2Q8N436 756 aa14.24□□□□□ -0.13
CHD4-210ENST00000544040 ARNT2Q9HBZ2 717 aa14.24□□□□□ -0.13
CHD4-210ENST00000544040 KLK4Q9Y5K2 254 aa14.24□□□□□ -0.13
CHD4-210ENST00000544040 ETV7Q9Y603 341 aa14.24□□□□□ -0.13
CHD4-210ENST00000544040 IGHV3-64DA0A0J9YX35 117 aa14.24□□□□□ -0.13
CHD4-210ENST00000544040 OLFM2O95897 454 aa14.24□□□□□ -0.13
CHD4-210ENST00000544040 LALBAP00709 142 aa14.24□□□□□ -0.13
CHD4-210ENST00000544040 IGHV3-9P01782 118 aa14.24□□□□□ -0.13
CHD4-210ENST00000544040 ATP1B1P05026 303 aa14.24□□□□□ -0.13
CHD4-210ENST00000544040 CNTN4Q8IWV2 1026 aa14.24□□□□□ -0.13
CHD4-210ENST00000544040 FYTTD1Q96QD9 318 aaKnown RBP14.24□□□□□ -0.13
CHD4-210ENST00000544040 ZCCHC4Q9H5U6 513 aa14.24□□□□□ -0.13
CHD4-210ENST00000544040 A0A1B0GWA3 101 aa14.24□□□□□ -0.13
CHD4-210ENST00000544040 OR2B11Q5JQS5 317 aa14.24□□□□□ -0.13
CHD4-210ENST00000544040 RPL7L1Q6DKI1 246 aaKnown RBP14.24□□□□□ -0.13
CHD4-210ENST00000544040 C19orf47Q8N9M1 422 aaKnown RBP14.24□□□□□ -0.13
CHD4-210ENST00000544040 ZC3HAV1LQ96H79 300 aaKnown RBP14.24□□□□□ -0.13
CHD4-210ENST00000544040 CREBZFQ9NS37 354 aa14.24□□□□□ -0.13
CHD4-210ENST00000544040 RAB22AQ9UL26 194 aa14.24□□□□□ -0.13
CHD4-210ENST00000544040 PPP1R3CQ9UQK1 317 aa14.24□□□□□ -0.13
CHD4-210ENST00000544040 UMAD1C9J7I0 102 aa14.24□□□□□ -0.13
CHD4-210ENST00000544040 PPP5D1E7EU14 171 aa14.24□□□□□ -0.13
CHD4-210ENST00000544040 K7EQM0 130 aa14.24□□□□□ -0.13
CHD4-210ENST00000544040 UBE2MP61081 183 aaKnown RBP14.24□□□□□ -0.13
CHD4-210ENST00000544040 NMES1Q9C002 83 aa14.24□□□□□ -0.13
CHD4-210ENST00000544040 SIGLEC6O43699 453 aa14.23□□□□□ -0.13
CHD4-210ENST00000544040 PRDX1Q06830 199 aaKnown RBP14.23□□□□□ -0.13
CHD4-210ENST00000544040 LRRC26Q2I0M4 334 aa14.23□□□□□ -0.13
CHD4-210ENST00000544040 H2BFWTQ7Z2G1 175 aa14.23□□□□□ -0.13
CHD4-210ENST00000544040 OR5M8Q8NGP6 311 aa14.23□□□□□ -0.13
CHD4-210ENST00000544040 OR14A16Q8NHC5 309 aa14.23□□□□□ -0.13
CHD4-210ENST00000544040 OR6C1Q96RD1 312 aa14.23□□□□□ -0.13
CHD4-210ENST00000544040 RYDENQ9NUL5 291 aaKnown RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms