RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 B5MCH6 92 aa8.13□□□□□ -1.11
VPS13D-212ENST00000543766 SDHDO14521 159 aa8.13□□□□□ -1.11
VPS13D-212ENST00000543766 CTDSPLO15194 276 aa8.13□□□□□ -1.11
VPS13D-212ENST00000543766 DNPH1O43598 174 aa8.13□□□□□ -1.11
VPS13D-212ENST00000543766 ZNF432O94892 652 aa8.13□□□□□ -1.11
VPS13D-212ENST00000543766 PRKACGP22612 351 aa8.13□□□□□ -1.11
VPS13D-212ENST00000543766 EPHA2P29317 976 aa8.13□□□□□ -1.11
VPS13D-212ENST00000543766 NPBWR1P48145 328 aa8.13□□□□□ -1.11
VPS13D-212ENST00000543766 MMP16P51512 607 aa8.13□□□□□ -1.11
VPS13D-212ENST00000543766 HOXC5Q00444 222 aa8.13□□□□□ -1.11
VPS13D-212ENST00000543766 EMX1Q04741 257 aaPredicted RBP8.13□□□□□ -1.11
VPS13D-212ENST00000543766 ZNF787Q6DD87 383 aa8.13□□□□□ -1.11
VPS13D-212ENST00000543766 OR2A2Q6IF42 318 aa8.13□□□□□ -1.11
VPS13D-212ENST00000543766 RIMKLAQ8IXN7 391 aa8.13□□□□□ -1.11
VPS13D-212ENST00000543766 OR56A1Q8NGH5 318 aa8.13□□□□□ -1.11
VPS13D-212ENST00000543766 KLRG1Q96E93 195 aa8.13□□□□□ -1.11
VPS13D-212ENST00000543766 NAA38Q9BRA0 125 aaKnown RBP8.13□□□□□ -1.11
VPS13D-212ENST00000543766 C20orf24Q9BUV8 137 aa8.13□□□□□ -1.11
VPS13D-212ENST00000543766 ABHD16BQ9H3Z7 469 aa8.13□□□□□ -1.11
VPS13D-212ENST00000543766 OR6C3Q9NZP0 311 aa8.13□□□□□ -1.11
VPS13D-212ENST00000543766 RFNGQ9Y644 331 aa8.13□□□□□ -1.11
VPS13D-212ENST00000543766 SCN9AQ15858 1988 aa8.12□□□□□ -1.11
VPS13D-212ENST00000543766 AIREO43918 545 aa8.12□□□□□ -1.11
VPS13D-212ENST00000543766 NMBP08949 121 aa8.12□□□□□ -1.11
VPS13D-212ENST00000543766 GIFP27352 417 aa8.12□□□□□ -1.11
VPS13D-212ENST00000543766 BAXQ07812 192 aa8.12□□□□□ -1.11
VPS13D-212ENST00000543766 NSUN5P2Q63ZY6 315 aa8.12□□□□□ -1.11
VPS13D-212ENST00000543766 TSEN54Q7Z6J9 526 aaKnown RBP8.12□□□□□ -1.11
VPS13D-212ENST00000543766 KCNMB4Q86W47 210 aa8.12□□□□□ -1.11
VPS13D-212ENST00000543766 GABRG1Q8N1C3 465 aa8.12□□□□□ -1.11
VPS13D-212ENST00000543766 OR4E2Q8NGC2 313 aa8.12□□□□□ -1.11
VPS13D-212ENST00000543766 GPA33Q99795 319 aa8.12□□□□□ -1.11
VPS13D-212ENST00000543766 MEPEQ9NQ76 525 aaPredicted RBP8.12□□□□□ -1.11
VPS13D-212ENST00000543766 SLC9A2Q9UBY0 812 aa8.12□□□□□ -1.11
VPS13D-212ENST00000543766 NDRG4Q9ULP0 352 aaKnown RBP8.12□□□□□ -1.11
VPS13D-212ENST00000543766 ASF1AQ9Y294 204 aa8.12□□□□□ -1.11
VPS13D-212ENST00000543766 LYVE1Q9Y5Y7 322 aa8.12□□□□□ -1.11
VPS13D-212ENST00000543766 C2orf72A6NCS6 295 aa8.12□□□□□ -1.11
VPS13D-212ENST00000543766 MKRN2OSH3BPM6 223 aa8.12□□□□□ -1.11
VPS13D-212ENST00000543766 PPP6CO00743 305 aa8.12□□□□□ -1.11
VPS13D-212ENST00000543766 OR12D1P0DN82 309 aa8.12□□□□□ -1.11
VPS13D-212ENST00000543766 SLC2A2P11168 524 aaPredicted RBP8.12□□□□□ -1.11
VPS13D-212ENST00000543766 HCCSP53701 268 aa8.12□□□□□ -1.11
VPS13D-212ENST00000543766 PPM1JQ5JR12 505 aa8.12□□□□□ -1.11
VPS13D-212ENST00000543766 CES5AQ6NT32 575 aa8.12□□□□□ -1.11
VPS13D-212ENST00000543766 CCDC144NLQ6NUI1 221 aa8.12□□□□□ -1.11
VPS13D-212ENST00000543766 TMPRSS11AQ6ZMR5 421 aa8.12□□□□□ -1.11
VPS13D-212ENST00000543766 GOLGA7Q7Z5G4 137 aa8.12□□□□□ -1.11
VPS13D-212ENST00000543766 PTOV1Q86YD1 416 aa8.12□□□□□ -1.11
VPS13D-212ENST00000543766 CILP2Q8IUL8 1156 aa8.12□□□□□ -1.11
VPS13D-212ENST00000543766 ZNF567Q8N184 647 aa8.12□□□□□ -1.11
VPS13D-212ENST00000543766 EID2Q8N6I1 236 aa8.12□□□□□ -1.11
VPS13D-212ENST00000543766 ZNF784Q8NCA9 323 aaPredicted RBP8.12□□□□□ -1.11
VPS13D-212ENST00000543766 ARSGQ96EG1 525 aa8.12□□□□□ -1.11
VPS13D-212ENST00000543766 OR2A14Q96R47 310 aa8.12□□□□□ -1.11
VPS13D-212ENST00000543766 P2RX4Q99571 388 aa8.12□□□□□ -1.11
VPS13D-212ENST00000543766 ALG12Q9BV10 488 aa8.12□□□□□ -1.11
VPS13D-212ENST00000543766 FAM49AQ9H0Q0 323 aaPredicted RBP8.12□□□□□ -1.11
VPS13D-212ENST00000543766 ZNF358Q9NW07 568 aa8.12□□□□□ -1.11
VPS13D-212ENST00000543766 RHCGQ9UBD6 479 aa8.12□□□□□ -1.11
VPS13D-212ENST00000543766 MYOTQ9UBF9 498 aa8.12□□□□□ -1.11
VPS13D-212ENST00000543766 COPS7AQ9UBW8 275 aa8.12□□□□□ -1.11
VPS13D-212ENST00000543766 A4GNTQ9UNA3 340 aa8.12□□□□□ -1.11
VPS13D-212ENST00000543766 KCNE1BA0A087WTH5 132 aa8.12□□□□□ -1.11
VPS13D-212ENST00000543766 CLDN24A6NM45 220 aa8.12□□□□□ -1.11
VPS13D-212ENST00000543766 PROB1E7EW31 1015 aa8.12□□□□□ -1.11
VPS13D-212ENST00000543766 NME4O00746 187 aa8.12□□□□□ -1.11
VPS13D-212ENST00000543766 MAN2B1O00754 1011 aa8.12□□□□□ -1.11
VPS13D-212ENST00000543766 IL7RP16871 459 aa8.12□□□□□ -1.11
VPS13D-212ENST00000543766 AZU1P20160 251 aa8.12□□□□□ -1.11
VPS13D-212ENST00000543766 SDC4P31431 198 aa8.12□□□□□ -1.11
VPS13D-212ENST00000543766 OR12D2P58182 307 aa8.12□□□□□ -1.11
VPS13D-212ENST00000543766 LCN2P80188 198 aa8.12□□□□□ -1.11
VPS13D-212ENST00000543766 OR2T11Q8NH01 316 aa8.12□□□□□ -1.11
VPS13D-212ENST00000543766 CHRDL1Q9BU40 450 aa8.12□□□□□ -1.11
VPS13D-212ENST00000543766 TMPRSS13Q9BYE2 586 aa8.12□□□□□ -1.11
VPS13D-212ENST00000543766 WRAP73Q9P2S5 460 aaPredicted RBP8.12□□□□□ -1.11
VPS13D-212ENST00000543766 ZNF107Q9UII5 783 aaPredicted RBP8.12□□□□□ -1.11
VPS13D-212ENST00000543766 RALYQ9UKM9 306 aaKnown RBP8.12□□□□□ -1.11
VPS13D-212ENST00000543766 ZNF816-ZNF321PA0A0X1KG74 233 aa8.11□□□□□ -1.11
VPS13D-212ENST00000543766 C9J4A7 227 aa8.11□□□□□ -1.11
VPS13D-212ENST00000543766 I6L893 689 aaPredicted RBP8.11□□□□□ -1.11
VPS13D-212ENST00000543766 DSCR3O14972 297 aa8.11□□□□□ -1.11
VPS13D-212ENST00000543766 ENTPD6O75354 484 aa8.11□□□□□ -1.11
VPS13D-212ENST00000543766 H2AFB1P0C5Y9 115 aa8.11□□□□□ -1.11
VPS13D-212ENST00000543766 ELOA3BQ3SY89 546 aa8.11□□□□□ -1.11
VPS13D-212ENST00000543766 GGNBP1Q5YKI7 109 aa8.11□□□□□ -1.11
VPS13D-212ENST00000543766 APOBEC3HQ6NTF7 200 aaKnown RBP8.11□□□□□ -1.11
VPS13D-212ENST00000543766 HIST2H3AQ71DI3 136 aa8.11□□□□□ -1.11
VPS13D-212ENST00000543766 RNF152Q8N8N0 203 aa8.11□□□□□ -1.11
VPS13D-212ENST00000543766 ZNF738Q8NE65 137 aa8.11□□□□□ -1.11
VPS13D-212ENST00000543766 ELOA3Q8NG57 546 aa8.11□□□□□ -1.11
VPS13D-212ENST00000543766 OR2T4Q8NH00 348 aa8.11□□□□□ -1.11
VPS13D-212ENST00000543766 ROPN1LQ96C74 230 aa8.11□□□□□ -1.11
VPS13D-212ENST00000543766 NODALQ96S42 347 aa8.11□□□□□ -1.11
VPS13D-212ENST00000543766 ARL6Q9H0F7 186 aa8.11□□□□□ -1.11
VPS13D-212ENST00000543766 SLC22A13Q9Y226 551 aa8.11□□□□□ -1.11
VPS13D-212ENST00000543766 DOCK5Q9H7D0 1870 aa8.11□□□□□ -1.11
VPS13D-212ENST00000543766 VENTXO95231 258 aa8.11□□□□□ -1.11
VPS13D-212ENST00000543766 RLN1P04808 185 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms