RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 ARRDC3Q96B67 414 aa17.81■□□□□ 0.44
SUDS3-204ENST00000543473 NAA11Q9BSU3 229 aaPredicted RBP17.81■□□□□ 0.44
SUDS3-204ENST00000543473 ZNF576Q9H609 170 aa17.81■□□□□ 0.44
SUDS3-204ENST00000543473 ANKRD61A6NGH8 418 aa17.8■□□□□ 0.44
SUDS3-204ENST00000543473 DOK2O60496 412 aa17.8■□□□□ 0.44
SUDS3-204ENST00000543473 LCATP04180 440 aa17.8■□□□□ 0.44
SUDS3-204ENST00000543473 DCTDP32321 178 aa17.8■□□□□ 0.44
SUDS3-204ENST00000543473 POU3F1Q03052 451 aaPredicted RBP17.8■□□□□ 0.44
SUDS3-204ENST00000543473 FAM74A1Q5RGS3 127 aa17.8■□□□□ 0.44
SUDS3-204ENST00000543473 RTL6Q6ICC9 239 aa17.8■□□□□ 0.44
SUDS3-204ENST00000543473 FAM160A2Q8N612 972 aaPredicted RBP17.8■□□□□ 0.44
SUDS3-204ENST00000543473 SPTSSAQ969W0 71 aa17.8■□□□□ 0.44
SUDS3-204ENST00000543473 UPRTQ96BW1 309 aa17.8■□□□□ 0.44
SUDS3-204ENST00000543473 MCCC2Q9HCC0 563 aa17.8■□□□□ 0.44
SUDS3-204ENST00000543473 CD79BP40259 229 aa17.8■□□□□ 0.44
SUDS3-204ENST00000543473 CDK5R1Q15078 307 aa17.8■□□□□ 0.44
SUDS3-204ENST00000543473 MCATQ8IVS2 390 aaKnown RBP17.8■□□□□ 0.44
SUDS3-204ENST00000543473 SYS1Q8N2H4 156 aa17.8■□□□□ 0.44
SUDS3-204ENST00000543473 PLA2G12AQ9BZM1 189 aa17.8■□□□□ 0.44
SUDS3-204ENST00000543473 KLK11Q9UBX7 282 aa17.8■□□□□ 0.44
SUDS3-204ENST00000543473 SUSD2Q9UGT4 822 aa17.8■□□□□ 0.44
SUDS3-204ENST00000543473 RPH3AQ9Y2J0 694 aaPredicted RBP17.8■□□□□ 0.44
SUDS3-204ENST00000543473 EMC9Q9Y3B6 208 aa17.8■□□□□ 0.44
SUDS3-204ENST00000543473 FZD6O60353 706 aa17.8■□□□□ 0.44
SUDS3-204ENST00000543473 RGS11O94810 467 aa17.8■□□□□ 0.44
SUDS3-204ENST00000543473 INHBBP09529 407 aa17.8■□□□□ 0.44
SUDS3-204ENST00000543473 EPXP11678 715 aa17.8■□□□□ 0.44
SUDS3-204ENST00000543473 NAGAP17050 411 aa17.8■□□□□ 0.44
SUDS3-204ENST00000543473 ZP3P21754 424 aa17.8■□□□□ 0.44
SUDS3-204ENST00000543473 WNT3P56703 355 aa17.8■□□□□ 0.44
SUDS3-204ENST00000543473 FBXW12Q6X9E4 464 aa17.8■□□□□ 0.44
SUDS3-204ENST00000543473 GCDHQ92947 438 aaPredicted RBP17.8■□□□□ 0.44
SUDS3-204ENST00000543473 A0A1W2PR48 441 aa17.8■□□□□ 0.44
SUDS3-204ENST00000543473 ITGB2P05107 769 aa17.8■□□□□ 0.44
SUDS3-204ENST00000543473 SFTPDP35247 375 aa17.8■□□□□ 0.44
SUDS3-204ENST00000543473 MAGEB1P43366 347 aa17.8■□□□□ 0.44
SUDS3-204ENST00000543473 ERV3-1Q14264 604 aa17.8■□□□□ 0.44
SUDS3-204ENST00000543473 RBM39Q14498 530 aaKnown RBP17.8■□□□□ 0.44
SUDS3-204ENST00000543473 MPEG1Q2M385 716 aa17.8■□□□□ 0.44
SUDS3-204ENST00000543473 LSMEM1Q8N8F7 131 aa17.8■□□□□ 0.44
SUDS3-204ENST00000543473 SLC35A4Q96G79 324 aa17.8■□□□□ 0.44
SUDS3-204ENST00000543473 SDF2Q99470 211 aa17.8■□□□□ 0.44
SUDS3-204ENST00000543473 NXF5Q9H1B4 397 aaKnown RBP17.8■□□□□ 0.44
SUDS3-204ENST00000543473 GAREM1Q9H706 876 aa17.8■□□□□ 0.44
SUDS3-204ENST00000543473 COL11A2P13942 1736 aaPredicted RBP17.79■□□□□ 0.44
SUDS3-204ENST00000543473 RPS2P15880 293 aaKnown RBP17.79■□□□□ 0.44
SUDS3-204ENST00000543473 TSFMP43897 325 aaKnown RBP17.79■□□□□ 0.44
SUDS3-204ENST00000543473 ZNF136P52737 540 aa17.79■□□□□ 0.44
SUDS3-204ENST00000543473 NDUFA6P56556 154 aa17.79■□□□□ 0.44
SUDS3-204ENST00000543473 SMAD2Q15796 467 aaKnown RBP17.79■□□□□ 0.44
SUDS3-204ENST00000543473 OR56B2PQ8NGI1 322 aa17.79■□□□□ 0.44
SUDS3-204ENST00000543473 EXOSC6Q5RKV6 272 aaKnown RBP17.79■□□□□ 0.44
SUDS3-204ENST00000543473 FRMD1Q8N878 549 aa17.79■□□□□ 0.44
SUDS3-204ENST00000543473 KCNG3Q8TAE7 436 aa17.79■□□□□ 0.44
SUDS3-204ENST00000543473 TOE1Q96GM8 510 aaKnown RBP17.79■□□□□ 0.44
SUDS3-204ENST00000543473 SGPP1Q9BX95 441 aa17.79■□□□□ 0.44
SUDS3-204ENST00000543473 ZDHHC5Q9C0B5 715 aa17.79■□□□□ 0.44
SUDS3-204ENST00000543473 CGGBP1Q9UFW8 167 aaPredicted RBP17.79■□□□□ 0.44
SUDS3-204ENST00000543473 PURGQ9UJV8 347 aaKnown RBP17.79■□□□□ 0.44
SUDS3-204ENST00000543473 DUX1O43812 170 aa17.79■□□□□ 0.44
SUDS3-204ENST00000543473 SGCZQ96LD1 299 aa17.79■□□□□ 0.44
SUDS3-204ENST00000543473 KPTNQ9Y664 436 aa17.79■□□□□ 0.44
SUDS3-204ENST00000543473 PEX12O00623 359 aa17.78■□□□□ 0.44
SUDS3-204ENST00000543473 PMP2P02689 132 aa17.78■□□□□ 0.44
SUDS3-204ENST00000543473 HIST1H1CP16403 213 aaKnown RBP17.78■□□□□ 0.44
SUDS3-204ENST00000543473 GABRG1Q8N1C3 465 aa17.78■□□□□ 0.44
SUDS3-204ENST00000543473 VN1R2Q8NFZ6 395 aa17.78■□□□□ 0.44
SUDS3-204ENST00000543473 OR1M1Q8NGA1 313 aa17.78■□□□□ 0.44
SUDS3-204ENST00000543473 OR51Q1Q8NH59 317 aa17.78■□□□□ 0.44
SUDS3-204ENST00000543473 WBP2Q969T9 261 aa17.78■□□□□ 0.44
SUDS3-204ENST00000543473 TM7SF3Q9NS93 570 aa17.78■□□□□ 0.44
SUDS3-204ENST00000543473 PLEK2Q9NYT0 353 aa17.78■□□□□ 0.44
SUDS3-204ENST00000543473 EFCAB7A8K855 629 aa17.78■□□□□ 0.44
SUDS3-204ENST00000543473 PRAMEF26H0Y7S4 382 aa17.78■□□□□ 0.44
SUDS3-204ENST00000543473 MGMTP16455 207 aa17.78■□□□□ 0.44
SUDS3-204ENST00000543473 HSD17B11Q8NBQ5 300 aa17.78■□□□□ 0.44
SUDS3-204ENST00000543473 OR4Q3Q8NH05 313 aa17.78■□□□□ 0.44
SUDS3-204ENST00000543473 AP1S3Q96PC3 154 aa17.78■□□□□ 0.44
SUDS3-204ENST00000543473 DERL3Q96Q80 235 aa17.78■□□□□ 0.44
SUDS3-204ENST00000543473 TMEM231Q9H6L2 316 aa17.78■□□□□ 0.44
SUDS3-204ENST00000543473 TUBG2Q9NRH3 451 aa17.78■□□□□ 0.44
SUDS3-204ENST00000543473 RAB22AQ9UL26 194 aa17.78■□□□□ 0.44
SUDS3-204ENST00000543473 ARID1AO14497 2285 aa17.78■□□□□ 0.44
SUDS3-204ENST00000543473 PRSS38A1L453 326 aa17.78■□□□□ 0.44
SUDS3-204ENST00000543473 H3BUI4 141 aa17.78■□□□□ 0.44
SUDS3-204ENST00000543473 NSA2O95478 260 aaKnown RBP17.78■□□□□ 0.44
SUDS3-204ENST00000543473 MFGE8Q08431 387 aaPredicted RBP17.78■□□□□ 0.44
SUDS3-204ENST00000543473 SLC22A24Q8N4F4 322 aa17.78■□□□□ 0.44
SUDS3-204ENST00000543473 MRPL38Q96DV4 380 aaKnown RBP17.78■□□□□ 0.44
SUDS3-204ENST00000543473 LPAR4Q99677 370 aa17.78■□□□□ 0.44
SUDS3-204ENST00000543473 PTDSS2Q9BVG9 487 aa17.78■□□□□ 0.44
SUDS3-204ENST00000543473 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.78■□□□□ 0.44
SUDS3-204ENST00000543473 WSB2Q9NYS7 404 aaPredicted RBP17.78■□□□□ 0.44
SUDS3-204ENST00000543473 CCDC163A0A0D9SF12 145 aa17.78■□□□□ 0.44
SUDS3-204ENST00000543473 CDC14CA4D256 554 aa17.78■□□□□ 0.44
SUDS3-204ENST00000543473 IMPA2O14732 288 aa17.78■□□□□ 0.44
SUDS3-204ENST00000543473 NUDT21O43809 227 aaKnown RBP17.78■□□□□ 0.44
SUDS3-204ENST00000543473 NPY4RP50391 375 aa17.78■□□□□ 0.44
SUDS3-204ENST00000543473 RPL23AP62750 156 aaKnown RBP17.78■□□□□ 0.44
SUDS3-204ENST00000543473 GPR137CQ8N3F9 429 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms