RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, human

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX11-223	ENST00000542838	NUP210L	Q5VU65	1888 aa		11.73	□□□□□ -0.53
DDX11-223	ENST00000542838		A0A0J9YY10	115 aa		11.73	□□□□□ -0.53
DDX11-223	ENST00000542838	RFPL4A	A6NLU0	287 aa		11.73	□□□□□ -0.53
DDX11-223	ENST00000542838	RFPL4AL1	F8VTS6	287 aa		11.73	□□□□□ -0.53
DDX11-223	ENST00000542838	TGFBR3L	H3BV60	316 aa		11.73	□□□□□ -0.53
DDX11-223	ENST00000542838	C2orf76	Q3KRA6	126 aa		11.73	□□□□□ -0.53
DDX11-223	ENST00000542838	ATRAID	Q6UW56	229 aa		11.73	□□□□□ -0.53
DDX11-223	ENST00000542838	PRSS35	Q8N3Z0	413 aa		11.73	□□□□□ -0.53
DDX11-223	ENST00000542838	TWSG1	Q9GZX9	223 aa		11.73	□□□□□ -0.53
DDX11-223	ENST00000542838	POFUT1	Q9H488	388 aa		11.73	□□□□□ -0.53
DDX11-223	ENST00000542838	CDC40	O60508	579 aa	Known RBP eCLIP	11.72	□□□□□ -0.53
DDX11-223	ENST00000542838	SRPX2	O60687	465 aa	Predicted RBP	11.72	□□□□□ -0.53
DDX11-223	ENST00000542838	PRAMEF2	O60811	474 aa		11.72	□□□□□ -0.53
DDX11-223	ENST00000542838	GPANK1	O95872	356 aa		11.72	□□□□□ -0.53
DDX11-223	ENST00000542838	CTSB	P07858	339 aa		11.72	□□□□□ -0.53
DDX11-223	ENST00000542838	CT45A8	P0DMV1	189 aa		11.72	□□□□□ -0.53
DDX11-223	ENST00000542838	CT45A9	P0DMV2	189 aa		11.72	□□□□□ -0.53
DDX11-223	ENST00000542838	EIF2B5	Q13144	721 aa	Known RBP	11.72	□□□□□ -0.53
DDX11-223	ENST00000542838	GRM7	Q14831	915 aa		11.72	□□□□□ -0.53
DDX11-223	ENST00000542838	CT45A2	Q5DJT8	189 aa		11.72	□□□□□ -0.53
DDX11-223	ENST00000542838	LRFN4	Q6PJG9	635 aa		11.72	□□□□□ -0.53
DDX11-223	ENST00000542838	NKX3-1	Q99801	234 aa	Predicted RBP	11.72	□□□□□ -0.53
DDX11-223	ENST00000542838	ATG5	Q9H1Y0	275 aa		11.72	□□□□□ -0.53
DDX11-223	ENST00000542838	WNT11	O96014	354 aa		11.72	□□□□□ -0.53
DDX11-223	ENST00000542838	ITGA5	P08648	1049 aa		11.72	□□□□□ -0.53
DDX11-223	ENST00000542838	APEH	P13798	732 aa	Known RBP	11.72	□□□□□ -0.53
DDX11-223	ENST00000542838	ALOX5AP	P20292	161 aa		11.72	□□□□□ -0.53
DDX11-223	ENST00000542838	ACHE	P22303	614 aa		11.72	□□□□□ -0.53
DDX11-223	ENST00000542838	CCKBR	P32239	447 aa		11.72	□□□□□ -0.53
DDX11-223	ENST00000542838	KIR3DL2	P43630	455 aa		11.72	□□□□□ -0.53
DDX11-223	ENST00000542838	PPP1CA	P62136	330 aa		11.72	□□□□□ -0.53
DDX11-223	ENST00000542838	RASGEF1B	Q0VAM2	473 aa		11.72	□□□□□ -0.53
DDX11-223	ENST00000542838	RAB11B	Q15907	218 aa		11.72	□□□□□ -0.53
DDX11-223	ENST00000542838	ETFDH	Q16134	617 aa		11.72	□□□□□ -0.53
DDX11-223	ENST00000542838	MEST	Q5EB52	335 aa		11.72	□□□□□ -0.53
DDX11-223	ENST00000542838	WBP2NL	Q6ICG8	309 aa		11.72	□□□□□ -0.53
DDX11-223	ENST00000542838	LRRC69	Q6ZNQ3	347 aa		11.72	□□□□□ -0.53
DDX11-223	ENST00000542838	ZNF546	Q86UE3	836 aa		11.72	□□□□□ -0.53
DDX11-223	ENST00000542838	C12orf45	Q8N5I9	185 aa	Predicted RBP	11.72	□□□□□ -0.53
DDX11-223	ENST00000542838	CCDC107	Q8WV48	283 aa		11.72	□□□□□ -0.53
DDX11-223	ENST00000542838	FAM3D	Q96BQ1	224 aa		11.72	□□□□□ -0.53
DDX11-223	ENST00000542838	DCBLD2	Q96PD2	775 aa		11.72	□□□□□ -0.53
DDX11-223	ENST00000542838	SLC38A3	Q99624	504 aa		11.72	□□□□□ -0.53
DDX11-223	ENST00000542838	PELO	Q9BRX2	385 aa	Known RBP	11.72	□□□□□ -0.53
DDX11-223	ENST00000542838	SLC25A32	Q9H2D1	315 aa		11.72	□□□□□ -0.53
DDX11-223	ENST00000542838	IFT46	Q9NQC8	304 aa		11.72	□□□□□ -0.53
DDX11-223	ENST00000542838	TRAV14DV4	A0A0A6YYC5	116 aa		11.71	□□□□□ -0.53
DDX11-223	ENST00000542838		A0A1B0GW55	424 aa		11.71	□□□□□ -0.53
DDX11-223	ENST00000542838	OR2W5	A6NFC9	320 aa		11.71	□□□□□ -0.53
DDX11-223	ENST00000542838	SIGLEC5	O15389	551 aa		11.71	□□□□□ -0.53
DDX11-223	ENST00000542838	HOXC4	P09017	264 aa	Predicted RBP	11.71	□□□□□ -0.53
DDX11-223	ENST00000542838	OR4E1	P0C645	316 aa		11.71	□□□□□ -0.53
DDX11-223	ENST00000542838	DUX4L2	P0CJ85	424 aa		11.71	□□□□□ -0.53
DDX11-223	ENST00000542838	DUX4L3	P0CJ86	424 aa		11.71	□□□□□ -0.53
DDX11-223	ENST00000542838	DUX4L4	P0CJ87	422 aa		11.71	□□□□□ -0.53
DDX11-223	ENST00000542838	DUX4L5	P0CJ88	424 aa		11.71	□□□□□ -0.53
DDX11-223	ENST00000542838	DUX4L6	P0CJ89	424 aa		11.71	□□□□□ -0.53
DDX11-223	ENST00000542838	DUX4L7	P0CJ90	424 aa		11.71	□□□□□ -0.53
DDX11-223	ENST00000542838	SIGLEC14	Q08ET2	396 aa		11.71	□□□□□ -0.53
DDX11-223	ENST00000542838	DMWD	Q09019	674 aa		11.71	□□□□□ -0.53
DDX11-223	ENST00000542838	ERV3-1	Q14264	604 aa		11.71	□□□□□ -0.53
DDX11-223	ENST00000542838	HYAL4	Q2M3T9	481 aa		11.71	□□□□□ -0.53
DDX11-223	ENST00000542838	ARHGAP40	Q5TG30	622 aa		11.71	□□□□□ -0.53
DDX11-223	ENST00000542838	TMED4	Q7Z7H5	227 aa		11.71	□□□□□ -0.53
DDX11-223	ENST00000542838	GABRG1	Q8N1C3	465 aa		11.71	□□□□□ -0.53
DDX11-223	ENST00000542838	CLEC1A	Q8NC01	280 aa		11.71	□□□□□ -0.53
DDX11-223	ENST00000542838	ST8SIA2	Q92186	375 aa		11.71	□□□□□ -0.53
DDX11-223	ENST00000542838	MCHR2	Q969V1	340 aa		11.71	□□□□□ -0.53
DDX11-223	ENST00000542838	LPAR4	Q99677	370 aa		11.71	□□□□□ -0.53
DDX11-223	ENST00000542838	PBX4	Q9BYU1	374 aa		11.71	□□□□□ -0.53
DDX11-223	ENST00000542838	MMP25	Q9NPA2	562 aa		11.71	□□□□□ -0.53
DDX11-223	ENST00000542838	GDE1	Q9NZC3	331 aa		11.71	□□□□□ -0.53
DDX11-223	ENST00000542838	UPB1	Q9UBR1	384 aa		11.71	□□□□□ -0.53
DDX11-223	ENST00000542838	DUX4	Q9UBX2	424 aa		11.71	□□□□□ -0.53
DDX11-223	ENST00000542838	ERVK-19	Q9WJR5	959 aa		11.71	□□□□□ -0.53
DDX11-223	ENST00000542838	PRKN	O60260	465 aa	Predicted RBP	11.71	□□□□□ -0.53
DDX11-223	ENST00000542838	RAD1	O60671	282 aa		11.71	□□□□□ -0.53
DDX11-223	ENST00000542838	PMS2P2	O95744	297 aa		11.71	□□□□□ -0.53
DDX11-223	ENST00000542838	WDPCP	O95876	746 aa		11.71	□□□□□ -0.53
DDX11-223	ENST00000542838	REN	P00797	406 aa		11.71	□□□□□ -0.53
DDX11-223	ENST00000542838	UBB	P0CG47	229 aa		11.71	□□□□□ -0.53
DDX11-223	ENST00000542838	UBC	P0CG48	685 aa	Known RBP	11.71	□□□□□ -0.53
DDX11-223	ENST00000542838	PNMT	P11086	282 aa		11.71	□□□□□ -0.53
DDX11-223	ENST00000542838	KIR2DL1	P43626	348 aa	Predicted RBP	11.71	□□□□□ -0.53
DDX11-223	ENST00000542838	RPS27A	P62979	156 aa	Known RBP	11.71	□□□□□ -0.53
DDX11-223	ENST00000542838	UBA52	P62987	128 aa	Known RBP	11.71	□□□□□ -0.53
DDX11-223	ENST00000542838	EGR3	Q06889	387 aa		11.71	□□□□□ -0.53
DDX11-223	ENST00000542838	RPL18	Q07020	188 aa	Known RBP	11.71	□□□□□ -0.53
DDX11-223	ENST00000542838	WDR38	Q5JTN6	314 aa		11.71	□□□□□ -0.53
DDX11-223	ENST00000542838	FAM74A1	Q5RGS3	127 aa		11.71	□□□□□ -0.53
DDX11-223	ENST00000542838	OTP	Q5XKR4	325 aa		11.71	□□□□□ -0.53
DDX11-223	ENST00000542838	C17orf107	Q6ZR85	190 aa		11.71	□□□□□ -0.53
DDX11-223	ENST00000542838	ATG4D	Q86TL0	474 aa	Predicted RBP	11.71	□□□□□ -0.53
DDX11-223	ENST00000542838	ZNF440	Q8IYI8	595 aa		11.71	□□□□□ -0.53
DDX11-223	ENST00000542838	OR10K1	Q8NGX5	313 aa		11.71	□□□□□ -0.53
DDX11-223	ENST00000542838	C16orf52	Q8NHV5	167 aa		11.71	□□□□□ -0.53
DDX11-223	ENST00000542838	BMF	Q96LC9	184 aa		11.71	□□□□□ -0.53
DDX11-223	ENST00000542838	C4orf45	Q96LM5	186 aa		11.71	□□□□□ -0.53
DDX11-223	ENST00000542838	DGAT2	Q96PD7	388 aa		11.71	□□□□□ -0.53
DDX11-223	ENST00000542838	TSPAN32	Q96QS1	320 aa		11.71	□□□□□ -0.53

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