RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 TMEM185BQ9H7F4 350 aa13.93□□□□□ -0.18
CNOT9-208ENST00000542068 MRM2Q9UI43 246 aaKnown RBP13.93□□□□□ -0.18
CNOT9-208ENST00000542068 KIF25Q9UIL4 384 aa13.93□□□□□ -0.18
CNOT9-208ENST00000542068 CTDSPLO15194 276 aa13.93□□□□□ -0.18
CNOT9-208ENST00000542068 HIST1H2ABP04908 130 aa13.93□□□□□ -0.18
CNOT9-208ENST00000542068 FAM122CQ6P4D5 195 aa13.93□□□□□ -0.18
CNOT9-208ENST00000542068 HIST3H2AQ7L7L0 130 aa13.93□□□□□ -0.18
CNOT9-208ENST00000542068 PDZD9Q8IXQ8 264 aa13.93□□□□□ -0.18
CNOT9-208ENST00000542068 SLC35F3Q8IY50 421 aa13.93□□□□□ -0.18
CNOT9-208ENST00000542068 HIST1H2ACQ93077 130 aa13.93□□□□□ -0.18
CNOT9-208ENST00000542068 ATG5Q9H1Y0 275 aa13.93□□□□□ -0.18
CNOT9-208ENST00000542068 C14orf105Q9NVL8 296 aa13.93□□□□□ -0.18
CNOT9-208ENST00000542068 OPN4Q9UHM6 478 aa13.93□□□□□ -0.18
CNOT9-208ENST00000542068 CLDN4O14493 209 aa13.93□□□□□ -0.18
CNOT9-208ENST00000542068 NKPD1Q17RQ9 610 aa13.93□□□□□ -0.18
CNOT9-208ENST00000542068 DEFB133Q30KQ1 61 aa13.93□□□□□ -0.18
CNOT9-208ENST00000542068 Q499Y3 187 aa13.93□□□□□ -0.18
CNOT9-208ENST00000542068 OR10K2Q6IF99 312 aa13.93□□□□□ -0.18
CNOT9-208ENST00000542068 TTLL10Q6ZVT0 673 aa13.93□□□□□ -0.18
CNOT9-208ENST00000542068 MRPS33Q9Y291 106 aaKnown RBP13.93□□□□□ -0.18
CNOT9-208ENST00000542068 MAP1BP46821 2468 aaKnown RBP13.92□□□□□ -0.18
CNOT9-208ENST00000542068 NAP1L6A6NFF2 107 aa13.92□□□□□ -0.18
CNOT9-208ENST00000542068 CYR61O00622 381 aa13.92□□□□□ -0.18
CNOT9-208ENST00000542068 APBB3O95704 486 aa13.92□□□□□ -0.18
CNOT9-208ENST00000542068 CTRB1P17538 263 aa13.92□□□□□ -0.18
CNOT9-208ENST00000542068 GRK6P43250 576 aa13.92□□□□□ -0.18
CNOT9-208ENST00000542068 CSRP2Q16527 193 aa13.92□□□□□ -0.18
CNOT9-208ENST00000542068 CTRB2Q6GPI1 263 aa13.92□□□□□ -0.18
CNOT9-208ENST00000542068 TSSK4Q6SA08 328 aa13.92□□□□□ -0.18
CNOT9-208ENST00000542068 LRRN1Q6UXK5 716 aa13.92□□□□□ -0.18
CNOT9-208ENST00000542068 OR2AK2Q8NG84 335 aa13.92□□□□□ -0.18
CNOT9-208ENST00000542068 WBP1Q96G27 269 aa13.92□□□□□ -0.18
CNOT9-208ENST00000542068 KLHDC7BQ96G42 594 aa13.92□□□□□ -0.18
CNOT9-208ENST00000542068 SAV1Q9H4B6 383 aaPredicted RBP13.92□□□□□ -0.18
CNOT9-208ENST00000542068 MRTO4Q9UKD2 239 aaKnown RBP13.92□□□□□ -0.18
CNOT9-208ENST00000542068 SLC6A5Q9Y345 797 aa13.92□□□□□ -0.18
CNOT9-208ENST00000542068 SDK2Q58EX2 2172 aa13.92□□□□□ -0.18
CNOT9-208ENST00000542068 OR2M5A3KFT3 312 aa13.92□□□□□ -0.18
CNOT9-208ENST00000542068 GFERP55789 205 aa13.92□□□□□ -0.18
CNOT9-208ENST00000542068 ALKBH1Q13686 389 aaKnown RBP13.92□□□□□ -0.18
CNOT9-208ENST00000542068 HDDC2Q7Z4H3 204 aa13.92□□□□□ -0.18
CNOT9-208ENST00000542068 FAM174AQ8TBP5 190 aa13.92□□□□□ -0.18
CNOT9-208ENST00000542068 THAP3Q8WTV1 239 aaPredicted RBP13.92□□□□□ -0.18
CNOT9-208ENST00000542068 MIB2Q96AX9 1013 aa13.92□□□□□ -0.18
CNOT9-208ENST00000542068 KLHDC3Q9BQ90 382 aa13.92□□□□□ -0.18
CNOT9-208ENST00000542068 PDCD10Q9BUL8 212 aa13.92□□□□□ -0.18
CNOT9-208ENST00000542068 DHCR7Q9UBM7 475 aaKnown RBP13.92□□□□□ -0.18
CNOT9-208ENST00000542068 SERTAD3Q9UJW9 196 aa13.92□□□□□ -0.18
CNOT9-208ENST00000542068 SLC22A13Q9Y226 551 aa13.92□□□□□ -0.18
CNOT9-208ENST00000542068 GPRIN2O60269 458 aa13.91□□□□□ -0.18
CNOT9-208ENST00000542068 GABRA1P14867 456 aa13.91□□□□□ -0.18
CNOT9-208ENST00000542068 POU3F4P49335 361 aa13.91□□□□□ -0.18
CNOT9-208ENST00000542068 AKR1D1P51857 326 aa13.91□□□□□ -0.18
CNOT9-208ENST00000542068 MGAT2Q10469 447 aa13.91□□□□□ -0.18
CNOT9-208ENST00000542068 TAF13Q15543 124 aa13.91□□□□□ -0.18
CNOT9-208ENST00000542068 TMEM205Q6UW68 189 aa13.91□□□□□ -0.18
CNOT9-208ENST00000542068 NT5CQ8TCD5 201 aa13.91□□□□□ -0.18
CNOT9-208ENST00000542068 SCARB1Q8WTV0 552 aa13.91□□□□□ -0.18
CNOT9-208ENST00000542068 MRPL38Q96DV4 380 aaKnown RBP13.91□□□□□ -0.18
CNOT9-208ENST00000542068 ADOQ96SZ5 270 aa13.91□□□□□ -0.18
CNOT9-208ENST00000542068 AMELYQ99218 206 aa13.91□□□□□ -0.18
CNOT9-208ENST00000542068 GABRG3Q99928 467 aa13.91□□□□□ -0.18
CNOT9-208ENST00000542068 SYT4Q9H2B2 425 aa13.91□□□□□ -0.18
CNOT9-208ENST00000542068 CLEC1BQ9P126 229 aa13.91□□□□□ -0.18
CNOT9-208ENST00000542068 ICAM5Q9UMF0 924 aa13.91□□□□□ -0.18
CNOT9-208ENST00000542068 TOR1AO14656 332 aa13.91□□□□□ -0.18
CNOT9-208ENST00000542068 PPP3CBP16298 524 aa13.91□□□□□ -0.18
CNOT9-208ENST00000542068 NAGAP17050 411 aa13.91□□□□□ -0.18
CNOT9-208ENST00000542068 ARHGAP40Q5TG30 622 aa13.91□□□□□ -0.18
CNOT9-208ENST00000542068 LRFN4Q6PJG9 635 aa13.91□□□□□ -0.18
CNOT9-208ENST00000542068 UNQ9370/PRO34162Q6UXP9 181 aa13.91□□□□□ -0.18
CNOT9-208ENST00000542068 ZNF227Q86WZ6 799 aa13.91□□□□□ -0.18
CNOT9-208ENST00000542068 WNT2BQ93097 391 aa13.91□□□□□ -0.18
CNOT9-208ENST00000542068 ANKRD9Q96BM1 317 aaPredicted RBP13.91□□□□□ -0.18
CNOT9-208ENST00000542068 POFUT1Q9H488 388 aa13.91□□□□□ -0.18
CNOT9-208ENST00000542068 ZCCHC4Q9H5U6 513 aa13.91□□□□□ -0.18
CNOT9-208ENST00000542068 OIP5O43482 229 aa13.91□□□□□ -0.18
CNOT9-208ENST00000542068 GLSO94925 669 aaPredicted RBP13.91□□□□□ -0.18
CNOT9-208ENST00000542068 RNH1P13489 461 aaKnown RBP13.91□□□□□ -0.18
CNOT9-208ENST00000542068 STARP49675 285 aa13.91□□□□□ -0.18
CNOT9-208ENST00000542068 ZNF273Q14593 569 aa13.91□□□□□ -0.18
CNOT9-208ENST00000542068 RBMS2Q15434 407 aaKnown RBP13.91□□□□□ -0.18
CNOT9-208ENST00000542068 C1orf189Q5VU69 101 aa13.91□□□□□ -0.18
CNOT9-208ENST00000542068 SPICQ8N5J4 248 aa13.91□□□□□ -0.18
CNOT9-208ENST00000542068 MRPL48Q96GC5 212 aaKnown RBP13.91□□□□□ -0.18
CNOT9-208ENST00000542068 STACQ99469 402 aa13.91□□□□□ -0.18
CNOT9-208ENST00000542068 TAS2R3Q9NYW6 316 aa13.91□□□□□ -0.18
CNOT9-208ENST00000542068 HRH3Q9Y5N1 445 aa13.91□□□□□ -0.18
CNOT9-208ENST00000542068 RNF215Q9Y6U7 377 aa13.91□□□□□ -0.18
CNOT9-208ENST00000542068 GLCEO94923 617 aa13.9□□□□□ -0.18
CNOT9-208ENST00000542068 AKR7A3O95154 331 aa13.9□□□□□ -0.18
CNOT9-208ENST00000542068 FAUP35544 74 aaKnown RBP13.9□□□□□ -0.18
CNOT9-208ENST00000542068 GMFBP60983 142 aa13.9□□□□□ -0.18
CNOT9-208ENST00000542068 ALG10Q5BKT4 473 aa13.9□□□□□ -0.18
CNOT9-208ENST00000542068 ELFN2Q5R3F8 820 aa13.9□□□□□ -0.18
CNOT9-208ENST00000542068 ZNF660Q6AZW8 331 aaPredicted RBP13.9□□□□□ -0.18
CNOT9-208ENST00000542068 CBLN3Q6UW01 205 aa13.9□□□□□ -0.18
CNOT9-208ENST00000542068 SEZ6L2Q6UXD5 910 aa13.9□□□□□ -0.18
CNOT9-208ENST00000542068 DPY19L2P2Q6ZN68 376 aa13.9□□□□□ -0.18
CNOT9-208ENST00000542068 C16orf52Q8NHV5 167 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms