RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 OR6C4Q8NGE1 309 aa3.32□□□□□ -1.88
SNHG1-217ENST00000541578 ACER1Q8TDN7 264 aa3.32□□□□□ -1.88
SNHG1-217ENST00000541578 ITLN1Q8WWA0 313 aa3.32□□□□□ -1.88
SNHG1-217ENST00000541578 UFD1Q92890 307 aa3.32□□□□□ -1.88
SNHG1-217ENST00000541578 TOMM40LQ969M1 308 aa3.32□□□□□ -1.88
SNHG1-217ENST00000541578 MTMR9Q96QG7 549 aa3.32□□□□□ -1.88
SNHG1-217ENST00000541578 PANX2Q96RD6 677 aa3.32□□□□□ -1.88
SNHG1-217ENST00000541578 CCT8L2Q96SF2 557 aa3.32□□□□□ -1.88
SNHG1-217ENST00000541578 CNN2Q99439 309 aaKnown RBP3.32□□□□□ -1.88
SNHG1-217ENST00000541578 C20orf24Q9BUV8 137 aa3.32□□□□□ -1.88
SNHG1-217ENST00000541578 TRIM15Q9C019 465 aa3.32□□□□□ -1.88
SNHG1-217ENST00000541578 ANKRD19PQ9H560 264 aa3.32□□□□□ -1.88
SNHG1-217ENST00000541578 SAMSN1Q9NSI8 373 aaKnown RBP3.32□□□□□ -1.88
SNHG1-217ENST00000541578 THUMPD1Q9NXG2 353 aaKnown RBP3.32□□□□□ -1.88
SNHG1-217ENST00000541578 ANGPTL2Q9UKU9 493 aa3.32□□□□□ -1.88
SNHG1-217ENST00000541578 MYO5AQ9Y4I1 1855 aaKnown RBP3.32□□□□□ -1.88
SNHG1-217ENST00000541578 VPS13AQ96RL7 3174 aa3.31□□□□□ -1.88
SNHG1-217ENST00000541578 KMT2BQ9UMN6 2715 aaPredicted RBP3.31□□□□□ -1.88
SNHG1-217ENST00000541578 SCN10AQ9Y5Y9 1956 aa3.31□□□□□ -1.88
SNHG1-217ENST00000541578 PTPRSQ13332 1948 aa3.31□□□□□ -1.88
SNHG1-217ENST00000541578 IGHV3OR16-10A0A075B7F0 116 aa3.31□□□□□ -1.88
SNHG1-217ENST00000541578 A0A0J9YWU9 116 aa3.31□□□□□ -1.88
SNHG1-217ENST00000541578 EPOPA6NHQ4 379 aa3.31□□□□□ -1.88
SNHG1-217ENST00000541578 VSTM2BA6NLU5 285 aa3.31□□□□□ -1.88
SNHG1-217ENST00000541578 SHISA9B4DS77 424 aa3.31□□□□□ -1.88
SNHG1-217ENST00000541578 C5orf67F2Z3F1 127 aa3.31□□□□□ -1.88
SNHG1-217ENST00000541578 SLC17A2O00624 439 aa3.31□□□□□ -1.88
SNHG1-217ENST00000541578 GPAA1O43292 621 aa3.31□□□□□ -1.88
SNHG1-217ENST00000541578 GALR3O60755 368 aaPredicted RBP3.31□□□□□ -1.88
SNHG1-217ENST00000541578 SCRG1O75711 98 aa3.31□□□□□ -1.88
SNHG1-217ENST00000541578 KBTBD11O94819 623 aa3.31□□□□□ -1.88
SNHG1-217ENST00000541578 H6PDO95479 791 aa3.31□□□□□ -1.88
SNHG1-217ENST00000541578 CST1P01037 141 aa3.31□□□□□ -1.88
SNHG1-217ENST00000541578 KRT6AP02538 564 aa3.31□□□□□ -1.88
SNHG1-217ENST00000541578 MELTFP08582 738 aa3.31□□□□□ -1.88
SNHG1-217ENST00000541578 POLR2MP0CAP2 368 aa3.31□□□□□ -1.88
SNHG1-217ENST00000541578 PGAM2P15259 253 aa3.31□□□□□ -1.88
SNHG1-217ENST00000541578 GCFC2P16383 781 aaKnown RBP3.31□□□□□ -1.88
SNHG1-217ENST00000541578 ABOP16442 354 aa3.31□□□□□ -1.88
SNHG1-217ENST00000541578 HOXB8P17481 243 aaPredicted RBP3.31□□□□□ -1.88
SNHG1-217ENST00000541578 HSD17B2P37059 387 aa3.31□□□□□ -1.88
SNHG1-217ENST00000541578 RFX3P48380 749 aa3.31□□□□□ -1.88
SNHG1-217ENST00000541578 HNRNPA3P51991 378 aaKnown RBP3.31□□□□□ -1.88
SNHG1-217ENST00000541578 LIM2P55344 173 aa3.31□□□□□ -1.88
SNHG1-217ENST00000541578 SCRN3Q0VDG4 424 aa3.31□□□□□ -1.88
SNHG1-217ENST00000541578 GK3PQ14409 553 aa3.31□□□□□ -1.88
SNHG1-217ENST00000541578 GLYR1Q49A26 553 aaPredicted RBP3.31□□□□□ -1.88
SNHG1-217ENST00000541578 TCEAL5Q5H9L2 206 aa3.31□□□□□ -1.88
SNHG1-217ENST00000541578 FAM120AOSQ5T036 256 aa3.31□□□□□ -1.88
SNHG1-217ENST00000541578 C1orf220Q5T0J3 134 aa3.31□□□□□ -1.88
SNHG1-217ENST00000541578 OR52E8Q6IFG1 317 aa3.31□□□□□ -1.88
SNHG1-217ENST00000541578 SLC8B1Q6J4K2 584 aa3.31□□□□□ -1.88
SNHG1-217ENST00000541578 ZNF613Q6PF04 617 aa3.31□□□□□ -1.88
SNHG1-217ENST00000541578 CLEC2AQ6UVW9 174 aa3.31□□□□□ -1.88
SNHG1-217ENST00000541578 GDPD3Q7L5L3 318 aa3.31□□□□□ -1.88
SNHG1-217ENST00000541578 SSX9Q7RTT3 188 aa3.31□□□□□ -1.88
SNHG1-217ENST00000541578 TIPARPQ7Z3E1 657 aaKnown RBP3.31□□□□□ -1.88
SNHG1-217ENST00000541578 GTSCR1Q86UQ5 136 aa3.31□□□□□ -1.88
SNHG1-217ENST00000541578 HIPK1Q86Z02 1210 aa3.31□□□□□ -1.88
SNHG1-217ENST00000541578 FGFRL1Q8N441 504 aa3.31□□□□□ -1.88
SNHG1-217ENST00000541578 OR52H1Q8NGJ2 320 aa3.31□□□□□ -1.88
SNHG1-217ENST00000541578 OR6T1Q8NGN1 323 aa3.31□□□□□ -1.88
SNHG1-217ENST00000541578 DNAJA4Q8WW22 397 aaPredicted RBP3.31□□□□□ -1.88
SNHG1-217ENST00000541578 RASL10AQ92737 203 aa3.31□□□□□ -1.88
SNHG1-217ENST00000541578 TOP1MTQ969P6 601 aa3.31□□□□□ -1.88
SNHG1-217ENST00000541578 LRRC45Q96CN5 670 aa3.31□□□□□ -1.88
SNHG1-217ENST00000541578 ZNF689Q96CS4 500 aaPredicted RBP3.31□□□□□ -1.88
SNHG1-217ENST00000541578 ZNF578Q96N58 590 aaPredicted RBP3.31□□□□□ -1.88
SNHG1-217ENST00000541578 SLC7A5P2Q9GIP4 190 aa3.31□□□□□ -1.88
SNHG1-217ENST00000541578 NARFLQ9H6Q4 476 aa3.31□□□□□ -1.88
SNHG1-217ENST00000541578 FANCEQ9HB96 536 aa3.31□□□□□ -1.88
SNHG1-217ENST00000541578 IL20Q9NYY1 176 aa3.31□□□□□ -1.88
SNHG1-217ENST00000541578 KCNIP3Q9Y2W7 256 aa3.31□□□□□ -1.88
SNHG1-217ENST00000541578 STARD10Q9Y365 291 aa3.31□□□□□ -1.88
SNHG1-217ENST00000541578 STYXL1Q9Y6J8 313 aa3.31□□□□□ -1.88
SNHG1-217ENST00000541578 FRYLO94915 3013 aa3.31□□□□□ -1.88
SNHG1-217ENST00000541578 CHD8Q9HCK8 2581 aa3.31□□□□□ -1.88
SNHG1-217ENST00000541578 FANCMQ8IYD8 2048 aa3.31□□□□□ -1.88
SNHG1-217ENST00000541578 SIPA1L1O43166 1804 aa3.3□□□□□ -1.88
SNHG1-217ENST00000541578 DCHS1Q96JQ0 3298 aa3.3□□□□□ -1.88
SNHG1-217ENST00000541578 DMXL1Q9Y485 3027 aa3.3□□□□□ -1.88
SNHG1-217ENST00000541578 LOC100131303A0A0U1RQF7 123 aa3.3□□□□□ -1.88
SNHG1-217ENST00000541578 FRG2CA6NGY1 282 aa3.3□□□□□ -1.88
SNHG1-217ENST00000541578 KRTAP16-1A8MUX0 517 aa3.3□□□□□ -1.88
SNHG1-217ENST00000541578 SUPT3HB4E1H0 165 aa3.3□□□□□ -1.88
SNHG1-217ENST00000541578 SAP18O00422 153 aaKnown RBP3.3□□□□□ -1.88
SNHG1-217ENST00000541578 AIM2O14862 343 aa3.3□□□□□ -1.88
SNHG1-217ENST00000541578 LATO43561 262 aa3.3□□□□□ -1.88
SNHG1-217ENST00000541578 NEMFO60524 1076 aa3.3□□□□□ -1.88
SNHG1-217ENST00000541578 TBL1XO60907 577 aa3.3□□□□□ -1.88
SNHG1-217ENST00000541578 CRLF1O75462 422 aa3.3□□□□□ -1.88
SNHG1-217ENST00000541578 SLITRK3O94933 977 aa3.3□□□□□ -1.88
SNHG1-217ENST00000541578 CRYGBP07316 175 aa3.3□□□□□ -1.88
SNHG1-217ENST00000541578 LAMP1P11279 417 aa3.3□□□□□ -1.88
SNHG1-217ENST00000541578 IGHV1-2P23083 117 aa3.3□□□□□ -1.88
SNHG1-217ENST00000541578 HMOX2P30519 316 aa3.3□□□□□ -1.88
SNHG1-217ENST00000541578 PSMD7P51665 324 aa3.3□□□□□ -1.88
SNHG1-217ENST00000541578 GPM6AP51674 278 aa3.3□□□□□ -1.88
SNHG1-217ENST00000541578 CTAG1AP78358 180 aa3.3□□□□□ -1.88
SNHG1-217ENST00000541578 OXA1LQ15070 435 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms