RNA–Protein interactions for RNA: ENST00000540935.5

DDX11-217, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 2

Gene DDX11, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-217ENST00000540935 C1orf198Q9H425 327 aa12.79□□□□□ -0.36
DDX11-217ENST00000540935 DYNLRB1Q9NP97 96 aa12.79□□□□□ -0.36
DDX11-217ENST00000540935 TMEM38BQ9NVV0 291 aa12.79□□□□□ -0.36
DDX11-217ENST00000540935 ZNF446Q9NWS9 450 aa12.79□□□□□ -0.36
DDX11-217ENST00000540935 CDC42EP3Q9UKI2 254 aa12.79□□□□□ -0.36
DDX11-217ENST00000540935 MED31Q9Y3C7 131 aa12.79□□□□□ -0.36
DDX11-217ENST00000540935 YLPM1P49750 1951 aaKnown RBP12.79□□□□□ -0.36
DDX11-217ENST00000540935 TMEM129A0AVI4 362 aa12.78□□□□□ -0.36
DDX11-217ENST00000540935 NPIPB13A6NJU9 1138 aa12.78□□□□□ -0.36
DDX11-217ENST00000540935 NPIPB4C9JG80 1138 aa12.78□□□□□ -0.36
DDX11-217ENST00000540935 CCDC22O60826 627 aa12.78□□□□□ -0.36
DDX11-217ENST00000540935 SERPINA5P05154 406 aa12.78□□□□□ -0.36
DDX11-217ENST00000540935 QDPRP09417 244 aa12.78□□□□□ -0.36
DDX11-217ENST00000540935 NR2C1P13056 603 aa12.78□□□□□ -0.36
DDX11-217ENST00000540935 TNFRSF1BP20333 461 aa12.78□□□□□ -0.36
DDX11-217ENST00000540935 OR1E2P47887 323 aa12.78□□□□□ -0.36
DDX11-217ENST00000540935 ZNF84P51523 738 aa12.78□□□□□ -0.36
DDX11-217ENST00000540935 UGT2B15P54855 530 aa12.78□□□□□ -0.36
DDX11-217ENST00000540935 SF3A3Q12874 501 aaKnown RBP eCLIP12.78□□□□□ -0.362e-11■■■■■ 40.3
DDX11-217ENST00000540935 GGTLC2Q14390 218 aa12.78□□□□□ -0.36
DDX11-217ENST00000540935 CARTPTQ16568 116 aa12.78□□□□□ -0.36
DDX11-217ENST00000540935 HIST3H3Q16695 136 aa12.78□□□□□ -0.36
DDX11-217ENST00000540935 SLC36A2Q495M3 483 aa12.78□□□□□ -0.36
DDX11-217ENST00000540935 GKAP1Q5VSY0 366 aaPredicted RBP12.78□□□□□ -0.36
DDX11-217ENST00000540935 PODNL1Q6PEZ8 512 aa12.78□□□□□ -0.36
DDX11-217ENST00000540935 SKA3Q8IX90 412 aa12.78□□□□□ -0.36
DDX11-217ENST00000540935 PFN4Q8NHR9 129 aa12.78□□□□□ -0.36
DDX11-217ENST00000540935 MRPL24Q96A35 216 aaKnown RBP12.78□□□□□ -0.36
DDX11-217ENST00000540935 TPD52L3Q96J77 140 aa12.78□□□□□ -0.36
DDX11-217ENST00000540935 PRRC1Q96M27 445 aa12.78□□□□□ -0.36
DDX11-217ENST00000540935 FOXN4Q96NZ1 517 aa12.78□□□□□ -0.36
DDX11-217ENST00000540935 KCNK17Q96T54 332 aa12.78□□□□□ -0.36
DDX11-217ENST00000540935 SEPHS2Q99611 448 aa12.78□□□□□ -0.36
DDX11-217ENST00000540935 MS4A5Q9H3V2 200 aa12.78□□□□□ -0.36
DDX11-217ENST00000540935 INIPQ9NRY2 104 aa12.78□□□□□ -0.36
DDX11-217ENST00000540935 SLC7A8Q9UHI5 535 aa12.78□□□□□ -0.36
DDX11-217ENST00000540935 SONP18583 2426 aaKnown RBP12.77□□□□□ -0.37
DDX11-217ENST00000540935 SLC22A23A1A5C7 686 aa12.77□□□□□ -0.37
DDX11-217ENST00000540935 SYNGR3O43761 229 aa12.77□□□□□ -0.37
DDX11-217ENST00000540935 SHOX2O60902 331 aaPredicted RBP12.77□□□□□ -0.37
DDX11-217ENST00000540935 PTHP01270 115 aa12.77□□□□□ -0.37
DDX11-217ENST00000540935 F13BP05160 661 aa12.77□□□□□ -0.37
DDX11-217ENST00000540935 TSPAN19P0C672 248 aa12.77□□□□□ -0.37
DDX11-217ENST00000540935 IGHV4-31P0DP07 118 aa12.77□□□□□ -0.37
DDX11-217ENST00000540935 DAOP14920 347 aa12.77□□□□□ -0.37
DDX11-217ENST00000540935 GIFP27352 417 aa12.77□□□□□ -0.37
DDX11-217ENST00000540935 MDH1P40925 334 aaKnown RBP12.77□□□□□ -0.37
DDX11-217ENST00000540935 TAF11Q15544 211 aa12.77□□□□□ -0.37
DDX11-217ENST00000540935 IQCCQ4KMZ1 466 aa12.77□□□□□ -0.37
DDX11-217ENST00000540935 TMEM53Q6P2H8 277 aa12.77□□□□□ -0.37
DDX11-217ENST00000540935 NOXO1Q8NFA2 376 aa12.77□□□□□ -0.37
DDX11-217ENST00000540935 MCHR2Q969V1 340 aa12.77□□□□□ -0.37
DDX11-217ENST00000540935 RCN3Q96D15 328 aa12.77□□□□□ -0.37
DDX11-217ENST00000540935 HOPXQ9BPY8 73 aaPredicted RBP12.77□□□□□ -0.37
DDX11-217ENST00000540935 MRPL13Q9BYD1 178 aaKnown RBP12.77□□□□□ -0.37
DDX11-217ENST00000540935 C20orf141Q9NUB4 165 aa12.77□□□□□ -0.37
DDX11-217ENST00000540935 ARMCX1Q9P291 453 aa12.77□□□□□ -0.37
DDX11-217ENST00000540935 LPAR3Q9UBY5 353 aa12.77□□□□□ -0.37
DDX11-217ENST00000540935 SH3PXD2BA1X283 911 aa12.76□□□□□ -0.37
DDX11-217ENST00000540935 GMNCA6NCL1 334 aa12.76□□□□□ -0.37
DDX11-217ENST00000540935 M0R233 179 aa12.76□□□□□ -0.37
DDX11-217ENST00000540935 NDUFAB1O14561 156 aa12.76□□□□□ -0.37
DDX11-217ENST00000540935 STAMBPO95630 424 aa12.76□□□□□ -0.37
DDX11-217ENST00000540935 ADRA2AP08913 450 aa12.76□□□□□ -0.37
DDX11-217ENST00000540935 APEHP13798 732 aaKnown RBP12.76□□□□□ -0.37
DDX11-217ENST00000540935 ACADSP16219 412 aa12.76□□□□□ -0.37
DDX11-217ENST00000540935 AQP2P41181 271 aa12.76□□□□□ -0.37
DDX11-217ENST00000540935 ZNF133P52736 654 aaPredicted RBP12.76□□□□□ -0.37
DDX11-217ENST00000540935 RAB39AQ14964 217 aa12.76□□□□□ -0.37
DDX11-217ENST00000540935 FXNQ16595 210 aa12.76□□□□□ -0.37
DDX11-217ENST00000540935 C10orf128Q5T292 105 aa12.76□□□□□ -0.37
DDX11-217ENST00000540935 CDK20Q8IZL9 346 aa12.76□□□□□ -0.37
DDX11-217ENST00000540935 ZNF786Q8N393 782 aa12.76□□□□□ -0.37
DDX11-217ENST00000540935 OR1J2Q8NGS2 313 aa12.76□□□□□ -0.37
DDX11-217ENST00000540935 ASB10Q8WXI3 467 aa12.76□□□□□ -0.37
DDX11-217ENST00000540935 ZNF347Q96SE7 839 aa12.76□□□□□ -0.37
DDX11-217ENST00000540935 MRPL37Q9BZE1 423 aaKnown RBP12.76□□□□□ -0.37
DDX11-217ENST00000540935 BPESC1Q9GZL8 116 aa12.76□□□□□ -0.37
DDX11-217ENST00000540935 KCNN2Q9H2S1 579 aa12.76□□□□□ -0.37
DDX11-217ENST00000540935 RNF121Q9H920 327 aa12.76□□□□□ -0.37
DDX11-217ENST00000540935 EFCAB1Q9HAE3 211 aa12.76□□□□□ -0.37
DDX11-217ENST00000540935 SMURF2Q9HAU4 748 aa12.76□□□□□ -0.37
DDX11-217ENST00000540935 CMTM6Q9NX76 183 aa12.76□□□□□ -0.37
DDX11-217ENST00000540935 REV1Q9UBZ9 1251 aa12.76□□□□□ -0.37
DDX11-217ENST00000540935 HIF3AQ9Y2N7 669 aa12.76□□□□□ -0.37
DDX11-217ENST00000540935 LMX1BO60663 402 aa12.75□□□□□ -0.37
DDX11-217ENST00000540935 TRMUO75648 421 aaKnown RBP12.75□□□□□ -0.37
DDX11-217ENST00000540935 IFNW1P05000 195 aa12.75□□□□□ -0.37
DDX11-217ENST00000540935 FAM157CP0CG43 387 aa12.75□□□□□ -0.37
DDX11-217ENST00000540935 COX4I1P13073 169 aa12.75□□□□□ -0.37
DDX11-217ENST00000540935 ZNF16P17020 682 aaPredicted RBP12.75□□□□□ -0.37
DDX11-217ENST00000540935 ZNF23P17027 643 aa12.75□□□□□ -0.37
DDX11-217ENST00000540935 PLP2Q04941 152 aa12.75□□□□□ -0.37
DDX11-217ENST00000540935 ANKDD1AQ495B1 522 aa12.75□□□□□ -0.37
DDX11-217ENST00000540935 ALG10Q5BKT4 473 aa12.75□□□□□ -0.37
DDX11-217ENST00000540935 ARMC4Q5T2S8 1044 aa12.75□□□□□ -0.37
DDX11-217ENST00000540935 FAM166AQ6J272 317 aa12.75□□□□□ -0.37
DDX11-217ENST00000540935 SLC16A14Q7RTX9 510 aa12.75□□□□□ -0.37
DDX11-217ENST00000540935 ZNF584Q8IVC4 421 aa12.75□□□□□ -0.37
DDX11-217ENST00000540935 SLC15A3Q8IY34 581 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms