RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 POLR2MP0CAP2 368 aa1.72□□□□□ -2.13
MDM2-227ENST00000540709 PRPS2P11908 318 aa1.72□□□□□ -2.13
MDM2-227ENST00000540709 YAP1P46937 504 aaKnown RBP1.72□□□□□ -2.13
MDM2-227ENST00000540709 NPBWR2P48146 333 aa1.72□□□□□ -2.13
MDM2-227ENST00000540709 ARG2P78540 354 aa1.72□□□□□ -2.13
MDM2-227ENST00000540709 MRPL28Q13084 256 aaKnown RBP1.72□□□□□ -2.13
MDM2-227ENST00000540709 ATAD3BQ5T9A4 648 aa1.72□□□□□ -2.13
MDM2-227ENST00000540709 TRIM40Q6P9F5 258 aa1.72□□□□□ -2.13
MDM2-227ENST00000540709 ZNF493Q6ZR52 646 aa1.72□□□□□ -2.13
MDM2-227ENST00000540709 TRIM69Q86WT6 500 aa1.72□□□□□ -2.13
MDM2-227ENST00000540709 VSTM4Q8IW00 320 aa1.72□□□□□ -2.13
MDM2-227ENST00000540709 PIANPQ8IYJ0 282 aa1.72□□□□□ -2.13
MDM2-227ENST00000540709 FAM83FQ8NEG4 500 aaPredicted RBP1.72□□□□□ -2.13
MDM2-227ENST00000540709 RGP1Q92546 391 aaPredicted RBP1.72□□□□□ -2.13
MDM2-227ENST00000540709 IFT74Q96LB3 600 aa1.72□□□□□ -2.13
MDM2-227ENST00000540709 SLC39A3Q9BRY0 314 aa1.72□□□□□ -2.13
MDM2-227ENST00000540709 WFDC1Q9HC57 220 aa1.72□□□□□ -2.13
MDM2-227ENST00000540709 POLE4Q9NR33 117 aa1.72□□□□□ -2.13
MDM2-227ENST00000540709 EPS15L1Q9UBC2 864 aa1.72□□□□□ -2.13
MDM2-227ENST00000540709 RFNGQ9Y644 331 aa1.72□□□□□ -2.13
MDM2-227ENST00000540709 GPR179Q6PRD1 2367 aa1.72□□□□□ -2.13
MDM2-227ENST00000540709 CABIN1Q9Y6J0 2220 aa1.71□□□□□ -2.14
MDM2-227ENST00000540709 IGHV3-74A0A0B4J1X5 117 aa1.71□□□□□ -2.14
MDM2-227ENST00000540709 TRAV39A0A0B4J263 110 aa1.71□□□□□ -2.14
MDM2-227ENST00000540709 IGHV5-10-1A0A0J9YXX1 117 aa1.71□□□□□ -2.14
MDM2-227ENST00000540709 RRP8O43159 456 aaKnown RBP1.71□□□□□ -2.14
MDM2-227ENST00000540709 RBFOX2O43251 390 aaKnown RBP eCLIP1.71□□□□□ -2.14
MDM2-227ENST00000540709 GMFGO60234 142 aa1.71□□□□□ -2.14
MDM2-227ENST00000540709 SRP72O76094 671 aaKnown RBP1.71□□□□□ -2.14
MDM2-227ENST00000540709 GABARAPO95166 117 aa1.71□□□□□ -2.14
MDM2-227ENST00000540709 C2P06681 752 aa1.71□□□□□ -2.14
MDM2-227ENST00000540709 IQCF3P0C7M6 154 aa1.71□□□□□ -2.14
MDM2-227ENST00000540709 IGHV1-8P0DP01 117 aa1.71□□□□□ -2.14
MDM2-227ENST00000540709 CALM1P0DP23 149 aa1.71□□□□□ -2.14
MDM2-227ENST00000540709 CALM2P0DP24 149 aa1.71□□□□□ -2.14
MDM2-227ENST00000540709 CALM3P0DP25 149 aa1.71□□□□□ -2.14
MDM2-227ENST00000540709 DESP17661 470 aa1.71□□□□□ -2.14
MDM2-227ENST00000540709 CD1CP29017 333 aa1.71□□□□□ -2.14
MDM2-227ENST00000540709 CX3CR1P49238 355 aa1.71□□□□□ -2.14
MDM2-227ENST00000540709 CCT3P49368 545 aaKnown RBP1.71□□□□□ -2.14
MDM2-227ENST00000540709 CDK16Q00536 496 aa1.71□□□□□ -2.14
MDM2-227ENST00000540709 OGDHQ02218 1023 aa1.71□□□□□ -2.14
MDM2-227ENST00000540709 PDK3Q15120 406 aa1.71□□□□□ -2.14
MDM2-227ENST00000540709 KRTAP21-2Q3LI59 83 aa1.71□□□□□ -2.14
MDM2-227ENST00000540709 RABL6Q3YEC7 729 aaPredicted RBP1.71□□□□□ -2.14
MDM2-227ENST00000540709 CFAP157Q5JU67 520 aa1.71□□□□□ -2.14
MDM2-227ENST00000540709 ZSCAN30Q86W11 494 aa1.71□□□□□ -2.14
MDM2-227ENST00000540709 ZNF679Q8IYX0 411 aa1.71□□□□□ -2.14
MDM2-227ENST00000540709 C15orf56Q8N910 161 aa1.71□□□□□ -2.14
MDM2-227ENST00000540709 ZNF557Q8N988 423 aaPredicted RBP1.71□□□□□ -2.14
MDM2-227ENST00000540709 OR5D13Q8NGL4 314 aa1.71□□□□□ -2.14
MDM2-227ENST00000540709 OR2G2Q8NGZ5 317 aa1.71□□□□□ -2.14
MDM2-227ENST00000540709 LKAAEAR1Q8TD35 194 aa1.71□□□□□ -2.14
MDM2-227ENST00000540709 TBRG4Q969Z0 631 aaKnown RBP eCLIP1.71□□□□□ -2.14
MDM2-227ENST00000540709 TM4SF18Q96CE8 201 aa1.71□□□□□ -2.14
MDM2-227ENST00000540709 MED8Q96G25 268 aa1.71□□□□□ -2.14
MDM2-227ENST00000540709 COQ2Q96H96 371 aa1.71□□□□□ -2.14
MDM2-227ENST00000540709 OR8B4Q96RC9 309 aa1.71□□□□□ -2.14
MDM2-227ENST00000540709 PPA2Q9H2U2 334 aa1.71□□□□□ -2.14
MDM2-227ENST00000540709 CDH9Q9ULB4 789 aa1.71□□□□□ -2.14
MDM2-227ENST00000540709 CEMIPQ8WUJ3 1361 aa1.71□□□□□ -2.14
MDM2-227ENST00000540709 DOCK9Q9BZ29 2069 aa1.7□□□□□ -2.14
MDM2-227ENST00000540709 IGLV1-50A0A075B6I6 118 aa1.7□□□□□ -2.14
MDM2-227ENST00000540709 TRAV26-1A0A087WT03 109 aa1.7□□□□□ -2.14
MDM2-227ENST00000540709 A0A1B0GVX0 72 aa1.7□□□□□ -2.14
MDM2-227ENST00000540709 SOX15O60248 233 aa1.7□□□□□ -2.14
MDM2-227ENST00000540709 FCMRO60667 390 aa1.7□□□□□ -2.14
MDM2-227ENST00000540709 RAB3DO95716 219 aa1.7□□□□□ -2.14
MDM2-227ENST00000540709 HLA-DPB1P04440 258 aa1.7□□□□□ -2.14
MDM2-227ENST00000540709 FABP3P05413 133 aa1.7□□□□□ -2.14
MDM2-227ENST00000540709 FOLR1P15328 257 aa1.7□□□□□ -2.14
MDM2-227ENST00000540709 EPS15P42566 896 aa1.7□□□□□ -2.14
MDM2-227ENST00000540709 NCBP2P52298 156 aaKnown RBP eCLIP1.7□□□□□ -2.14
MDM2-227ENST00000540709 ATP1B3P54709 279 aa1.7□□□□□ -2.14
MDM2-227ENST00000540709 KRTAP12-4P60329 112 aa1.7□□□□□ -2.14
MDM2-227ENST00000540709 ENPP6Q6UWR7 440 aa1.7□□□□□ -2.14
MDM2-227ENST00000540709 KDM7AQ6ZMT4 941 aa1.7□□□□□ -2.14
MDM2-227ENST00000540709 LRRC74BQ6ZQY2 392 aa1.7□□□□□ -2.14
MDM2-227ENST00000540709 LINC00173Q6ZV60 143 aa1.7□□□□□ -2.14
MDM2-227ENST00000540709 LINC00304Q8N9R0 145 aa1.7□□□□□ -2.14
MDM2-227ENST00000540709 OR4S2Q8NH73 311 aa1.7□□□□□ -2.14
MDM2-227ENST00000540709 C10orf35Q96D05 121 aa1.7□□□□□ -2.14
MDM2-227ENST00000540709 WFIKKN1Q96NZ8 548 aa1.7□□□□□ -2.14
MDM2-227ENST00000540709 MS4A4EQ96PG1 132 aa1.7□□□□□ -2.14
MDM2-227ENST00000540709 ZNF382Q96SR6 550 aa1.7□□□□□ -2.14
MDM2-227ENST00000540709 SH3GL1Q99961 368 aa1.7□□□□□ -2.14
MDM2-227ENST00000540709 TMEM59Q9BXS4 323 aa1.7□□□□□ -2.14
MDM2-227ENST00000540709 FAM49BQ9NUQ9 324 aa1.7□□□□□ -2.14
MDM2-227ENST00000540709 GPATCH2LQ9NWQ4 482 aa1.7□□□□□ -2.14
MDM2-227ENST00000540709 KIAA1257Q9ULG3 409 aa1.7□□□□□ -2.14
MDM2-227ENST00000540709 WDR62O43379 1518 aa1.7□□□□□ -2.14
MDM2-227ENST00000540709 ATP10AO60312 1499 aa1.69□□□□□ -2.14
MDM2-227ENST00000540709 CDHR2Q9BYE9 1310 aa1.69□□□□□ -2.14
MDM2-227ENST00000540709 IGLV3-22A0A075B6J6 115 aa1.69□□□□□ -2.14
MDM2-227ENST00000540709 IGLV3-12A0A075B6K2 115 aa1.69□□□□□ -2.14
MDM2-227ENST00000540709 C15orf38-AP3S2A0A0A6YYH1 394 aa1.69□□□□□ -2.14
MDM2-227ENST00000540709 IGKV1D-13A0A0B4J2D9 117 aa1.69□□□□□ -2.14
MDM2-227ENST00000540709 BICDL2A1A5D9 508 aa1.69□□□□□ -2.14
MDM2-227ENST00000540709 CCL21O00585 134 aa1.69□□□□□ -2.14
MDM2-227ENST00000540709 NDC80O14777 642 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms