RNA–Protein interactions for RNA: ENST00000540122.5

PUDP-206, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 2 BASIC

Gene PUDP, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-206ENST00000540122 TNFRSF13BO14836 293 aaPredicted RBP12.9□□□□□ -0.34
PUDP-206ENST00000540122 CD55P08174 381 aa12.9□□□□□ -0.34
PUDP-206ENST00000540122 THRBP10828 461 aa12.9□□□□□ -0.34
PUDP-206ENST00000540122 HLA-DOBP13765 273 aa12.9□□□□□ -0.34
PUDP-206ENST00000540122 IL7RP16871 459 aa12.9□□□□□ -0.34
PUDP-206ENST00000540122 MPV17P39210 176 aa12.9□□□□□ -0.34
PUDP-206ENST00000540122 COPZ1P61923 177 aa12.9□□□□□ -0.34
PUDP-206ENST00000540122 EGR4Q05215 589 aa12.9□□□□□ -0.34
PUDP-206ENST00000540122 LARS2Q15031 903 aaKnown RBP12.9□□□□□ -0.34
PUDP-206ENST00000540122 TBC1D28Q2M2D7 210 aa12.9□□□□□ -0.34
PUDP-206ENST00000540122 ZCCHC23Q6ZST2 131 aa12.9□□□□□ -0.34
PUDP-206ENST00000540122 UEVLDQ8IX04 471 aa12.9□□□□□ -0.34
PUDP-206ENST00000540122 ZNF283Q8N7M2 679 aa12.9□□□□□ -0.34
PUDP-206ENST00000540122 OR6N1Q8NGY5 312 aa12.9□□□□□ -0.34
PUDP-206ENST00000540122 C1orf50Q9BV19 199 aa12.9□□□□□ -0.34
PUDP-206ENST00000540122 C1orf198Q9H425 327 aa12.9□□□□□ -0.34
PUDP-206ENST00000540122 NOTCH3Q9UM47 2321 aa12.89□□□□□ -0.35
PUDP-206ENST00000540122 KIR2DS1A0A191URI9 304 aa12.89□□□□□ -0.35
PUDP-206ENST00000540122 CHEK2O96017 543 aa12.89□□□□□ -0.35
PUDP-206ENST00000540122 HPRP00739 348 aa12.89□□□□□ -0.35
PUDP-206ENST00000540122 WNT2P09544 360 aa12.89□□□□□ -0.35
PUDP-206ENST00000540122 PRPS1L1P21108 318 aa12.89□□□□□ -0.35
PUDP-206ENST00000540122 DNAJB13P59910 316 aa12.89□□□□□ -0.35
PUDP-206ENST00000540122 FGF12P61328 243 aa12.89□□□□□ -0.35
PUDP-206ENST00000540122 BST1Q10588 318 aa12.89□□□□□ -0.35
PUDP-206ENST00000540122 SYPL1Q16563 259 aa12.89□□□□□ -0.35
PUDP-206ENST00000540122 PGS1Q32NB8 556 aa12.89□□□□□ -0.35
PUDP-206ENST00000540122 SPATA46Q5T0L3 261 aa12.89□□□□□ -0.35
PUDP-206ENST00000540122 KANK2Q63ZY3 851 aa12.89□□□□□ -0.35
PUDP-206ENST00000540122 PIWIL3Q7Z3Z3 882 aaKnown RBP12.89□□□□□ -0.35
PUDP-206ENST00000540122 MIER2Q8N344 545 aa12.89□□□□□ -0.35
PUDP-206ENST00000540122 SLC22A24Q8N4F4 322 aa12.89□□□□□ -0.35
PUDP-206ENST00000540122 OR4A15Q8NGL6 344 aa12.89□□□□□ -0.35
PUDP-206ENST00000540122 MARS2Q96GW9 593 aaKnown RBP12.89□□□□□ -0.35
PUDP-206ENST00000540122 TRNT1Q96Q11 434 aaKnown RBP12.89□□□□□ -0.35
PUDP-206ENST00000540122 SIGLEC11Q96RL6 698 aa12.89□□□□□ -0.35
PUDP-206ENST00000540122 CYSLTR2Q9NS75 346 aa12.89□□□□□ -0.35
PUDP-206ENST00000540122 PRDM4Q9UKN5 801 aa12.89□□□□□ -0.35
PUDP-206ENST00000540122 ZNF816-ZNF321PA0A0X1KG74 233 aa12.88□□□□□ -0.35
PUDP-206ENST00000540122 CDHR4A6H8M9 788 aa12.88□□□□□ -0.35
PUDP-206ENST00000540122 K7EIL1 84 aa12.88□□□□□ -0.35
PUDP-206ENST00000540122 HMGN4O00479 90 aa12.88□□□□□ -0.35
PUDP-206ENST00000540122 PEX11AO75192 247 aa12.88□□□□□ -0.35
PUDP-206ENST00000540122 DBIP07108 87 aaKnown RBP12.88□□□□□ -0.35
PUDP-206ENST00000540122 PRG2P13727 222 aa12.88□□□□□ -0.35
PUDP-206ENST00000540122 GRPRP30550 384 aa12.88□□□□□ -0.35
PUDP-206ENST00000540122 ARRB2P32121 409 aa12.88□□□□□ -0.35
PUDP-206ENST00000540122 MDH2P40926 338 aaKnown RBP12.88□□□□□ -0.35
PUDP-206ENST00000540122 GNB2P62879 340 aa12.88□□□□□ -0.35
PUDP-206ENST00000540122 TNFAIP6P98066 277 aaPredicted RBP12.88□□□□□ -0.35
PUDP-206ENST00000540122 HERPUD1Q15011 391 aa12.88□□□□□ -0.35
PUDP-206ENST00000540122 THEM4Q5T1C6 240 aa12.88□□□□□ -0.35
PUDP-206ENST00000540122 OR4F3Q6IEY1 312 aa12.88□□□□□ -0.35
PUDP-206ENST00000540122 GDPGP1Q6ZNW5 385 aa12.88□□□□□ -0.35
PUDP-206ENST00000540122 Q6ZTK2 550 aa12.88□□□□□ -0.35
PUDP-206ENST00000540122 H1FNTQ75WM6 255 aaPredicted RBP12.88□□□□□ -0.35
PUDP-206ENST00000540122 OR1J2Q8NGS2 313 aa12.88□□□□□ -0.35
PUDP-206ENST00000540122 TXNDC15Q96J42 360 aa12.88□□□□□ -0.35
PUDP-206ENST00000540122 PPP3R2Q96LZ3 170 aa12.88□□□□□ -0.35
PUDP-206ENST00000540122 ARHGDIGQ99819 225 aa12.88□□□□□ -0.35
PUDP-206ENST00000540122 SH3GL3Q99963 347 aa12.88□□□□□ -0.35
PUDP-206ENST00000540122 ZDHHC8Q9ULC8 765 aa12.88□□□□□ -0.35
PUDP-206ENST00000540122 TMEM233B4DJY2 109 aa12.87□□□□□ -0.35
PUDP-206ENST00000540122 MS4A18H0YCH9 400 aa12.87□□□□□ -0.35
PUDP-206ENST00000540122 RNASET2O00584 256 aaKnown RBP12.87□□□□□ -0.35
PUDP-206ENST00000540122 ZSCAN12O43309 604 aa12.87□□□□□ -0.35
PUDP-206ENST00000540122 XPNPEP2O43895 674 aa12.87□□□□□ -0.35
PUDP-206ENST00000540122 TSPAN9O75954 239 aa12.87□□□□□ -0.35
PUDP-206ENST00000540122 C1QCP02747 245 aa12.87□□□□□ -0.35
PUDP-206ENST00000540122 RPS2P15880 293 aaKnown RBP12.87□□□□□ -0.35
PUDP-206ENST00000540122 NCF2P19878 526 aaPredicted RBP12.87□□□□□ -0.35
PUDP-206ENST00000540122 UQCRC2P22695 453 aa12.87□□□□□ -0.35
PUDP-206ENST00000540122 IER3P46695 156 aa12.87□□□□□ -0.35
PUDP-206ENST00000540122 PCBP3P57721 371 aaKnown RBP12.87□□□□□ -0.35
PUDP-206ENST00000540122 MS4A18Q3C1V0 323 aa12.87□□□□□ -0.35
PUDP-206ENST00000540122 ZNF718Q3SXZ3 478 aa12.87□□□□□ -0.35
PUDP-206ENST00000540122 TTMPQ5BVD1 217 aa12.87□□□□□ -0.35
PUDP-206ENST00000540122 COX20Q5RI15 118 aa12.87□□□□□ -0.35
PUDP-206ENST00000540122 IL23RQ5VWK5 629 aa12.87□□□□□ -0.35
PUDP-206ENST00000540122 FOXB2Q5VYV0 432 aa12.87□□□□□ -0.35
PUDP-206ENST00000540122 DHRS7BQ6IAN0 325 aaPredicted RBP12.87□□□□□ -0.35
PUDP-206ENST00000540122 MUC20Q8N307 709 aaPredicted RBP12.87□□□□□ -0.35
PUDP-206ENST00000540122 TWIST2Q8WVJ9 160 aa12.87□□□□□ -0.35
PUDP-206ENST00000540122 TAAR8Q969N4 342 aa12.87□□□□□ -0.35
PUDP-206ENST00000540122 NUDT16L1Q9BRJ7 211 aaKnown RBP12.87□□□□□ -0.35
PUDP-206ENST00000540122 LRMDAQ9H2I8 198 aa12.87□□□□□ -0.35
PUDP-206ENST00000540122 TOR3AQ9H497 397 aa12.87□□□□□ -0.35
PUDP-206ENST00000540122 MTHFD2LQ9H903 347 aaPredicted RBP12.87□□□□□ -0.35
PUDP-206ENST00000540122 RNF121Q9H920 327 aa12.87□□□□□ -0.35
PUDP-206ENST00000540122 MSL2Q9HCI7 577 aa12.87□□□□□ -0.35
PUDP-206ENST00000540122 DNAH1Q9P2D7 4330 aa12.87□□□□□ -0.35
PUDP-206ENST00000540122 PPP1R3DO95685 299 aa12.86□□□□□ -0.35
PUDP-206ENST00000540122 PTHP01270 115 aa12.86□□□□□ -0.35
PUDP-206ENST00000540122 CBLP22681 906 aa12.86□□□□□ -0.35
PUDP-206ENST00000540122 LIPAP38571 399 aa12.86□□□□□ -0.35
PUDP-206ENST00000540122 CSNK1A1P48729 337 aa12.86□□□□□ -0.35
PUDP-206ENST00000540122 SMU1Q2TAY7 513 aa12.86□□□□□ -0.35
PUDP-206ENST00000540122 FAM69AQ5T7M9 428 aa12.86□□□□□ -0.35
PUDP-206ENST00000540122 MBNL2Q5VZF2 373 aaKnown RBP12.86□□□□□ -0.35
PUDP-206ENST00000540122 TMEM53Q6P2H8 277 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms