RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 ABCA4P78363 2273 aa6.12□□□□□ -1.43
LPCAT3-209ENST00000540060 TGFBR3Q03167 851 aa6.12□□□□□ -1.43
LPCAT3-209ENST00000540060 DAZAP2Q15038 168 aaPredicted RBP6.12□□□□□ -1.43
LPCAT3-209ENST00000540060 TAB1Q15750 504 aa6.12□□□□□ -1.43
LPCAT3-209ENST00000540060 STK11Q15831 433 aa6.12□□□□□ -1.43
LPCAT3-209ENST00000540060 CEACAM16Q2WEN9 425 aa6.12□□□□□ -1.43
LPCAT3-209ENST00000540060 TIMM23BQ5SRD1 257 aa6.12□□□□□ -1.43
LPCAT3-209ENST00000540060 FAM205BPQ63HN1 556 aa6.12□□□□□ -1.43
LPCAT3-209ENST00000540060 OR7E24Q6IFN5 339 aa6.12□□□□□ -1.43
LPCAT3-209ENST00000540060 HMBOX1Q6NT76 420 aa6.12□□□□□ -1.43
LPCAT3-209ENST00000540060 RPL13AP3Q6NVV1 102 aa6.12□□□□□ -1.43
LPCAT3-209ENST00000540060 SHQ1Q6PI26 577 aaKnown RBP6.12□□□□□ -1.43
LPCAT3-209ENST00000540060 ZNF627Q7L945 461 aa6.12□□□□□ -1.43
LPCAT3-209ENST00000540060 HS3ST5Q8IZT8 346 aa6.12□□□□□ -1.43
LPCAT3-209ENST00000540060 CLDN22Q8N7P3 220 aa6.12□□□□□ -1.43
LPCAT3-209ENST00000540060 ARIH2OSQ8N7S6 290 aa6.12□□□□□ -1.43
LPCAT3-209ENST00000540060 OR8D4Q8NGM9 314 aa6.12□□□□□ -1.43
LPCAT3-209ENST00000540060 OR1K1Q8NGR3 316 aa6.12□□□□□ -1.43
LPCAT3-209ENST00000540060 OR6N1Q8NGY5 312 aa6.12□□□□□ -1.43
LPCAT3-209ENST00000540060 MAGEE2Q8TD90 523 aaPredicted RBP6.12□□□□□ -1.43
LPCAT3-209ENST00000540060 GIPC3Q8TF64 312 aa6.12□□□□□ -1.43
LPCAT3-209ENST00000540060 PYDC1Q8WXC3 89 aa6.12□□□□□ -1.43
LPCAT3-209ENST00000540060 LRTOMTQ8WZ04 291 aa6.12□□□□□ -1.43
LPCAT3-209ENST00000540060 HDAC2Q92769 488 aaKnown RBP6.12□□□□□ -1.43
LPCAT3-209ENST00000540060 NMD3Q96D46 503 aaKnown RBP6.12□□□□□ -1.43
LPCAT3-209ENST00000540060 C14orf79Q96F83 325 aa6.12□□□□□ -1.43
LPCAT3-209ENST00000540060 ZC3HAV1LQ96H79 300 aaKnown RBP6.12□□□□□ -1.43
LPCAT3-209ENST00000540060 Q96M85 177 aa6.12□□□□□ -1.43
LPCAT3-209ENST00000540060 ZNF570Q96NI8 536 aa6.12□□□□□ -1.43
LPCAT3-209ENST00000540060 MUS81Q96NY9 551 aa6.12□□□□□ -1.43
LPCAT3-209ENST00000540060 CSMD1Q96PZ7 3565 aa6.12□□□□□ -1.43
LPCAT3-209ENST00000540060 FEVQ99581 238 aa6.12□□□□□ -1.43
LPCAT3-209ENST00000540060 NIPSNAP1Q9BPW8 284 aa6.12□□□□□ -1.43
LPCAT3-209ENST00000540060 USB1Q9BQ65 265 aaKnown RBP6.12□□□□□ -1.43
LPCAT3-209ENST00000540060 PLA2G12AQ9BZM1 189 aa6.12□□□□□ -1.43
LPCAT3-209ENST00000540060 ULBP2Q9BZM5 246 aa6.12□□□□□ -1.43
LPCAT3-209ENST00000540060 NDEL1Q9GZM8 345 aa6.12□□□□□ -1.43
LPCAT3-209ENST00000540060 EGLN3Q9H6Z9 239 aa6.12□□□□□ -1.43
LPCAT3-209ENST00000540060 B3GAT2Q9NPZ5 323 aa6.12□□□□□ -1.43
LPCAT3-209ENST00000540060 GLTPQ9NZD2 209 aa6.12□□□□□ -1.43
LPCAT3-209ENST00000540060 PDP1Q9P0J1 537 aaPredicted RBP6.12□□□□□ -1.43
LPCAT3-209ENST00000540060 STX18Q9P2W9 335 aaKnown RBP6.12□□□□□ -1.43
LPCAT3-209ENST00000540060 IL20RAQ9UHF4 553 aa6.12□□□□□ -1.43
LPCAT3-209ENST00000540060 ZNF346Q9UL40 294 aaKnown RBP6.12□□□□□ -1.43
LPCAT3-209ENST00000540060 MGAT4BQ9UQ53 548 aa6.12□□□□□ -1.43
LPCAT3-209ENST00000540060 CDH10Q9Y6N8 788 aa6.12□□□□□ -1.43
LPCAT3-209ENST00000540060 ARPC4-TTLL3A0A0A6YYG9 625 aa6.11□□□□□ -1.43
LPCAT3-209ENST00000540060 IGKV1D-43A0A0B4J1Z2 117 aa6.11□□□□□ -1.43
LPCAT3-209ENST00000540060 TEX13CA0A0J9YWL9 993 aa6.11□□□□□ -1.43
LPCAT3-209ENST00000540060 A6NIZ1 184 aa6.11□□□□□ -1.43
LPCAT3-209ENST00000540060 CYSRT1A8MQ03 144 aa6.11□□□□□ -1.43
LPCAT3-209ENST00000540060 DEFB108AA8MXU0 73 aa6.11□□□□□ -1.43
LPCAT3-209ENST00000540060 H7C1C5 153 aa6.11□□□□□ -1.43
LPCAT3-209ENST00000540060 BHLHE40O14503 412 aa6.11□□□□□ -1.43
LPCAT3-209ENST00000540060 ARPC3O15145 178 aa6.11□□□□□ -1.43
LPCAT3-209ENST00000540060 ENTPD5O75356 428 aa6.11□□□□□ -1.43
LPCAT3-209ENST00000540060 SEC14L2O76054 403 aa6.11□□□□□ -1.43
LPCAT3-209ENST00000540060 GOSR1O95249 250 aa6.11□□□□□ -1.43
LPCAT3-209ENST00000540060 SOX14O95416 240 aa6.11□□□□□ -1.43
LPCAT3-209ENST00000540060 SLC2A10O95528 541 aa6.11□□□□□ -1.43
LPCAT3-209ENST00000540060 PPP1R3DO95685 299 aa6.11□□□□□ -1.43
LPCAT3-209ENST00000540060 TXNDC12O95881 172 aa6.11□□□□□ -1.43
LPCAT3-209ENST00000540060 NR2C1P13056 603 aa6.11□□□□□ -1.43
LPCAT3-209ENST00000540060 APEHP13798 732 aaKnown RBP6.11□□□□□ -1.43
LPCAT3-209ENST00000540060 CDH2P19022 906 aaPredicted RBP6.11□□□□□ -1.43
LPCAT3-209ENST00000540060 GSTM3P21266 225 aa6.11□□□□□ -1.43
LPCAT3-209ENST00000540060 FASP25445 335 aa6.11□□□□□ -1.43
LPCAT3-209ENST00000540060 LOXP28300 417 aaPredicted RBP6.11□□□□□ -1.43
LPCAT3-209ENST00000540060 SDHAP31040 664 aa6.11□□□□□ -1.43
LPCAT3-209ENST00000540060 HOXC12P31275 282 aa6.11□□□□□ -1.43
LPCAT3-209ENST00000540060 SLC6A6P31641 620 aa6.11□□□□□ -1.43
LPCAT3-209ENST00000540060 ACVR1BP36896 505 aa6.11□□□□□ -1.43
LPCAT3-209ENST00000540060 RAP1BP61224 184 aa6.11□□□□□ -1.43
LPCAT3-209ENST00000540060 LCN6P62502 163 aa6.11□□□□□ -1.43
LPCAT3-209ENST00000540060 RAP1AP62834 184 aa6.11□□□□□ -1.43
LPCAT3-209ENST00000540060 ARF1P84077 181 aaKnown RBP6.11□□□□□ -1.43
LPCAT3-209ENST00000540060 MYBPC1Q00872 1141 aa6.11□□□□□ -1.43
LPCAT3-209ENST00000540060 FMODQ06828 376 aa6.11□□□□□ -1.43
LPCAT3-209ENST00000540060 CD47Q08722 323 aa6.11□□□□□ -1.43
LPCAT3-209ENST00000540060 KRR1Q13601 381 aaKnown RBP6.11□□□□□ -1.43
LPCAT3-209ENST00000540060 PPA1Q15181 289 aa6.11□□□□□ -1.43
LPCAT3-209ENST00000540060 RFX4Q33E94 735 aa6.11□□□□□ -1.43
LPCAT3-209ENST00000540060 TBRG1Q3YBR2 411 aa6.11□□□□□ -1.43
LPCAT3-209ENST00000540060 HIKESHIQ53FT3 197 aa6.11□□□□□ -1.43
LPCAT3-209ENST00000540060 C10orf128Q5T292 105 aa6.11□□□□□ -1.43
LPCAT3-209ENST00000540060 C1QTNF12Q5T7M4 302 aa6.11□□□□□ -1.43
LPCAT3-209ENST00000540060 GPR139Q6DWJ6 353 aa6.11□□□□□ -1.43
LPCAT3-209ENST00000540060 ZFP1Q6P2D0 407 aa6.11□□□□□ -1.43
LPCAT3-209ENST00000540060 ANKRD16Q6P6B7 361 aa6.11□□□□□ -1.43
LPCAT3-209ENST00000540060 LRFN4Q6PJG9 635 aa6.11□□□□□ -1.43
LPCAT3-209ENST00000540060 KLHL17Q6TDP4 642 aa6.11□□□□□ -1.43
LPCAT3-209ENST00000540060 CD300LDQ6UXZ3 194 aa6.11□□□□□ -1.43
LPCAT3-209ENST00000540060 DPY19L2P2Q6ZN68 376 aa6.11□□□□□ -1.43
LPCAT3-209ENST00000540060 RASSF6Q6ZTQ3 369 aa6.11□□□□□ -1.43
LPCAT3-209ENST00000540060 SSX8Q7RTT4 187 aa6.11□□□□□ -1.43
LPCAT3-209ENST00000540060 ADCK1Q86TW2 530 aa6.11□□□□□ -1.43
LPCAT3-209ENST00000540060 P2RY8Q86VZ1 359 aa6.11□□□□□ -1.43
LPCAT3-209ENST00000540060 WDR31Q8NA23 367 aa6.11□□□□□ -1.43
LPCAT3-209ENST00000540060 SYT14Q8NB59 555 aa6.11□□□□□ -1.43
LPCAT3-209ENST00000540060 OR52N5Q8NH56 324 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms