RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 C12orf45Q8N5I9 185 aaPredicted RBP12.63□□□□□ -0.39
SCNN1A-215ENST00000540037 PATE1Q8WXA2 126 aa12.63□□□□□ -0.39
SCNN1A-215ENST00000540037 TSACCQ96A04 125 aaPredicted RBP12.63□□□□□ -0.39
SCNN1A-215ENST00000540037 CTHRC1Q96CG8 243 aa12.63□□□□□ -0.39
SCNN1A-215ENST00000540037 ZNF471Q9BX82 626 aaPredicted RBP12.63□□□□□ -0.39
SCNN1A-215ENST00000540037 COLEC10Q9Y6Z7 277 aa12.63□□□□□ -0.39
SCNN1A-215ENST00000540037 SLC25A12O75746 678 aa12.63□□□□□ -0.39
SCNN1A-215ENST00000540037 MGMTP16455 207 aa12.63□□□□□ -0.39
SCNN1A-215ENST00000540037 PRSS3P35030 304 aa12.63□□□□□ -0.39
SCNN1A-215ENST00000540037 UBE2IP63279 158 aaKnown RBP12.63□□□□□ -0.39
SCNN1A-215ENST00000540037 SLC35D3Q5M8T2 416 aa12.63□□□□□ -0.39
SCNN1A-215ENST00000540037 SLC35D2Q76EJ3 337 aa12.63□□□□□ -0.39
SCNN1A-215ENST00000540037 OR2W3Q7Z3T1 314 aa12.63□□□□□ -0.39
SCNN1A-215ENST00000540037 JAZF1Q86VZ6 243 aa12.63□□□□□ -0.39
SCNN1A-215ENST00000540037 OR1S2Q8NGQ3 325 aa12.63□□□□□ -0.39
SCNN1A-215ENST00000540037 PAWRQ96IZ0 340 aaKnown RBP12.63□□□□□ -0.39
SCNN1A-215ENST00000540037 VRK1Q99986 396 aaPredicted RBP12.63□□□□□ -0.39
SCNN1A-215ENST00000540037 MICU1Q9BPX6 476 aa12.63□□□□□ -0.39
SCNN1A-215ENST00000540037 APOOQ9BUR5 198 aa12.63□□□□□ -0.39
SCNN1A-215ENST00000540037 LAMP5Q9UJQ1 280 aa12.63□□□□□ -0.39
SCNN1A-215ENST00000540037 SLC22A13Q9Y226 551 aa12.63□□□□□ -0.39
SCNN1A-215ENST00000540037 PTPRSQ13332 1948 aa12.62□□□□□ -0.39
SCNN1A-215ENST00000540037 TMEM82A0PJX8 343 aa12.62□□□□□ -0.39
SCNN1A-215ENST00000540037 ARPC3O15145 178 aa12.62□□□□□ -0.39
SCNN1A-215ENST00000540037 OR10H2O60403 315 aa12.62□□□□□ -0.39
SCNN1A-215ENST00000540037 RDH16O75452 317 aa12.62□□□□□ -0.39
SCNN1A-215ENST00000540037 WNT11O96014 354 aa12.62□□□□□ -0.39
SCNN1A-215ENST00000540037 CNR1P21554 472 aa12.62□□□□□ -0.39
SCNN1A-215ENST00000540037 KIR3DL2P43630 455 aa12.62□□□□□ -0.39
SCNN1A-215ENST00000540037 CTXN1P60606 82 aa12.62□□□□□ -0.39
SCNN1A-215ENST00000540037 PPP1CAP62136 330 aa12.62□□□□□ -0.39
SCNN1A-215ENST00000540037 SCGB2B2Q4G0G5 96 aa12.62□□□□□ -0.39
SCNN1A-215ENST00000540037 OR10K2Q6IF99 312 aa12.62□□□□□ -0.39
SCNN1A-215ENST00000540037 UNQ6126/PRO20091Q6UXV3 157 aa12.62□□□□□ -0.39
SCNN1A-215ENST00000540037 NPSR1Q6W5P4 371 aa12.62□□□□□ -0.39
SCNN1A-215ENST00000540037 MOB3CQ70IA8 216 aa12.62□□□□□ -0.39
SCNN1A-215ENST00000540037 ZNF627Q7L945 461 aa12.62□□□□□ -0.39
SCNN1A-215ENST00000540037 SLC16A9Q7RTY1 509 aa12.62□□□□□ -0.39
SCNN1A-215ENST00000540037 RNF208Q9H0X6 261 aa12.62□□□□□ -0.39
SCNN1A-215ENST00000540037 THAP10Q9P2Z0 257 aaPredicted RBP12.62□□□□□ -0.39
SCNN1A-215ENST00000540037 ERVK-19Q9WJR5 959 aa12.62□□□□□ -0.39
SCNN1A-215ENST00000540037 GPR89AB7ZAQ6 455 aa12.62□□□□□ -0.39
SCNN1A-215ENST00000540037 TGFBR3LH3BV60 316 aa12.62□□□□□ -0.39
SCNN1A-215ENST00000540037 CSTAP01040 98 aa12.62□□□□□ -0.39
SCNN1A-215ENST00000540037 ITGB2P05107 769 aa12.62□□□□□ -0.39
SCNN1A-215ENST00000540037 TACSTD2P09758 323 aa12.62□□□□□ -0.39
SCNN1A-215ENST00000540037 GPR89BP0CG08 455 aa12.62□□□□□ -0.39
SCNN1A-215ENST00000540037 ZNF28P17035 718 aa12.62□□□□□ -0.39
SCNN1A-215ENST00000540037 ADCYAP1P18509 176 aa12.62□□□□□ -0.39
SCNN1A-215ENST00000540037 S1PR1P21453 382 aa12.62□□□□□ -0.39
SCNN1A-215ENST00000540037 SRSF3P84103 164 aaKnown RBP12.62□□□□□ -0.39
SCNN1A-215ENST00000540037 ERV3-1Q14264 604 aa12.62□□□□□ -0.39
SCNN1A-215ENST00000540037 NKPD1Q17RQ9 610 aa12.62□□□□□ -0.39
SCNN1A-215ENST00000540037 DEFB110Q30KQ9 67 aa12.62□□□□□ -0.39
SCNN1A-215ENST00000540037 ABHD13Q7L211 337 aa12.62□□□□□ -0.39
SCNN1A-215ENST00000540037 ZNF761Q86XN6 746 aaPredicted RBP12.62□□□□□ -0.39
SCNN1A-215ENST00000540037 PUSL1Q8N0Z8 303 aaKnown RBP12.62□□□□□ -0.39
SCNN1A-215ENST00000540037 OR4S1Q8NGB4 309 aa12.62□□□□□ -0.39
SCNN1A-215ENST00000540037 TSEN15Q8WW01 171 aaKnown RBP12.62□□□□□ -0.39
SCNN1A-215ENST00000540037 FAM3DQ96BQ1 224 aa12.62□□□□□ -0.39
SCNN1A-215ENST00000540037 C3orf49Q96BT1 292 aa12.62□□□□□ -0.39
SCNN1A-215ENST00000540037 SLC17A9Q9BYT1 436 aa12.62□□□□□ -0.39
SCNN1A-215ENST00000540037 SLC39A1Q9NY26 324 aa12.62□□□□□ -0.39
SCNN1A-215ENST00000540037 PURGQ9UJV8 347 aaKnown RBP12.62□□□□□ -0.39
SCNN1A-215ENST00000540037 GMEB2Q9UKD1 530 aa12.62□□□□□ -0.39
SCNN1A-215ENST00000540037 FBXL21Q9UKT6 434 aa12.62□□□□□ -0.39
SCNN1A-215ENST00000540037 CDV3Q9UKY7 258 aaKnown RBP12.62□□□□□ -0.39
SCNN1A-215ENST00000540037 TRBV5-7A0A0A0MS05 114 aa12.62□□□□□ -0.39
SCNN1A-215ENST00000540037 A0A1B0GTQ1 180 aa12.62□□□□□ -0.39
SCNN1A-215ENST00000540037 PRSS38A1L453 326 aa12.62□□□□□ -0.39
SCNN1A-215ENST00000540037 ZNF98A6NK75 572 aa12.62□□□□□ -0.39
SCNN1A-215ENST00000540037 ELOA3DA6NLF2 546 aaPredicted RBP12.62□□□□□ -0.39
SCNN1A-215ENST00000540037 OIP5O43482 229 aa12.62□□□□□ -0.39
SCNN1A-215ENST00000540037 AMY2AP04746 511 aa12.62□□□□□ -0.39
SCNN1A-215ENST00000540037 MAPK3P27361 379 aaPredicted RBP12.62□□□□□ -0.39
SCNN1A-215ENST00000540037 ATP1B3P54709 279 aa12.62□□□□□ -0.39
SCNN1A-215ENST00000540037 SEC13P55735 322 aa12.62□□□□□ -0.39
SCNN1A-215ENST00000540037 RPS4XP62701 263 aaKnown RBP12.62□□□□□ -0.39
SCNN1A-215ENST00000540037 ELOA3BQ3SY89 546 aa12.62□□□□□ -0.39
SCNN1A-215ENST00000540037 WDR38Q5JTN6 314 aa12.62□□□□□ -0.39
SCNN1A-215ENST00000540037 FAM122BQ7Z309 247 aa12.62□□□□□ -0.39
SCNN1A-215ENST00000540037 EXD3Q8N9H8 876 aa12.62□□□□□ -0.39
SCNN1A-215ENST00000540037 ELOA3Q8NG57 546 aa12.62□□□□□ -0.39
SCNN1A-215ENST00000540037 MRPL48Q96GC5 212 aaKnown RBP12.62□□□□□ -0.39
SCNN1A-215ENST00000540037 KCNG2Q9UJ96 466 aa12.62□□□□□ -0.39
SCNN1A-215ENST00000540037 PCDHB10Q9UN67 800 aa12.62□□□□□ -0.39
SCNN1A-215ENST00000540037 LAMA1P25391 3075 aa12.61□□□□□ -0.39
SCNN1A-215ENST00000540037 RNF222A6NCQ9 220 aa12.61□□□□□ -0.39
SCNN1A-215ENST00000540037 MPTX1A8MV57 137 aa12.61□□□□□ -0.39
SCNN1A-215ENST00000540037 LINC01387J3KSC0 135 aa12.61□□□□□ -0.39
SCNN1A-215ENST00000540037 SIGLEC6O43699 453 aa12.61□□□□□ -0.39
SCNN1A-215ENST00000540037 KCNJ13O60928 360 aa12.61□□□□□ -0.39
SCNN1A-215ENST00000540037 RAB3DO95716 219 aa12.61□□□□□ -0.39
SCNN1A-215ENST00000540037 GP1BAP07359 652 aa12.61□□□□□ -0.39
SCNN1A-215ENST00000540037 CCR4P51679 360 aa12.61□□□□□ -0.39
SCNN1A-215ENST00000540037 EIF2B5Q13144 721 aaKnown RBP12.61□□□□□ -0.39
SCNN1A-215ENST00000540037 DHRS2Q13268 280 aa12.61□□□□□ -0.39
SCNN1A-215ENST00000540037 SQSTM1Q13501 440 aa12.61□□□□□ -0.39
SCNN1A-215ENST00000540037 ATPAF1Q5TC12 328 aaPredicted RBP12.61□□□□□ -0.39
SCNN1A-215ENST00000540037 CDC20BQ86Y33 519 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms