RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 RPRD1BQ9NQG5 326 aaKnown RBP15.16■□□□□ 0.02
COPS3-212ENST00000539941 CCDC59Q9P031 241 aaKnown RBP15.16■□□□□ 0.02
COPS3-212ENST00000539941 BOKQ9UMX3 212 aaPredicted RBP15.16■□□□□ 0.02
COPS3-212ENST00000539941 PEX16Q9Y5Y5 336 aa15.16■□□□□ 0.02
COPS3-212ENST00000539941 PMF1-BGLAPU3KQ54 211 aa15.16■□□□□ 0.02
COPS3-212ENST00000539941 A6NIZ1 184 aa15.16■□□□□ 0.02
COPS3-212ENST00000539941 LRRC3CA6NJW4 275 aa15.16■□□□□ 0.02
COPS3-212ENST00000539941 C12orf71A8MTZ7 269 aa15.16■□□□□ 0.02
COPS3-212ENST00000539941 MS4A18H0YCH9 400 aa15.16■□□□□ 0.02
COPS3-212ENST00000539941 SEC14L5O43304 696 aa15.16■□□□□ 0.02
COPS3-212ENST00000539941 ARHGEF9O43307 516 aa15.16■□□□□ 0.02
COPS3-212ENST00000539941 NEURL1O76050 574 aa15.16■□□□□ 0.02
COPS3-212ENST00000539941 GYPBP06028 91 aa15.16■□□□□ 0.02
COPS3-212ENST00000539941 ETV6P41212 452 aa15.16■□□□□ 0.02
COPS3-212ENST00000539941 CAPZA2P47755 286 aa15.16■□□□□ 0.02
COPS3-212ENST00000539941 DAP3P51398 398 aaKnown RBP15.16■□□□□ 0.02
COPS3-212ENST00000539941 RAP1BP61224 184 aa15.16■□□□□ 0.02
COPS3-212ENST00000539941 RAP1AP62834 184 aa15.16■□□□□ 0.02
COPS3-212ENST00000539941 ACSM1Q08AH1 577 aa15.16■□□□□ 0.02
COPS3-212ENST00000539941 ZNF239Q16600 458 aaKnown RBP15.16■□□□□ 0.02
COPS3-212ENST00000539941 TSTQ16762 297 aaKnown RBP15.16■□□□□ 0.02
COPS3-212ENST00000539941 MS4A18Q3C1V0 323 aa15.16■□□□□ 0.02
COPS3-212ENST00000539941 CRTC2Q53ET0 693 aaPredicted RBP15.16■□□□□ 0.02
COPS3-212ENST00000539941 RAET1LQ5VY80 246 aa15.16■□□□□ 0.02
COPS3-212ENST00000539941 TMPRSS11AQ6ZMR5 421 aa15.16■□□□□ 0.02
COPS3-212ENST00000539941 HDDC2Q7Z4H3 204 aa15.16■□□□□ 0.02
COPS3-212ENST00000539941 LHFPL3Q86UP9 236 aa15.16■□□□□ 0.02
COPS3-212ENST00000539941 ZNF485Q8NCK3 441 aa15.16■□□□□ 0.02
COPS3-212ENST00000539941 OR5M1Q8NGP8 315 aa15.16■□□□□ 0.02
COPS3-212ENST00000539941 OR2T4Q8NH00 348 aa15.16■□□□□ 0.02
COPS3-212ENST00000539941 ZPLD1Q8TCW7 415 aa15.16■□□□□ 0.02
COPS3-212ENST00000539941 DNAJA3Q96EY1 480 aa15.16■□□□□ 0.02
COPS3-212ENST00000539941 OR5B2Q96R09 309 aa15.16■□□□□ 0.02
COPS3-212ENST00000539941 FAM173AQ9BQD7 235 aa15.16■□□□□ 0.02
COPS3-212ENST00000539941 ARHGAP9Q9BRR9 750 aa15.16■□□□□ 0.02
COPS3-212ENST00000539941 ZFP64Q9NPA5 681 aa15.16■□□□□ 0.02
COPS3-212ENST00000539941 ASB6Q9NWX5 421 aa15.16■□□□□ 0.02
COPS3-212ENST00000539941 A0A0G2JMM0 328 aa15.15■□□□□ 0.02
COPS3-212ENST00000539941 A0A1W2PPB8 328 aa15.15■□□□□ 0.02
COPS3-212ENST00000539941 A0A1W2PRS3 328 aa15.15■□□□□ 0.02
COPS3-212ENST00000539941 HMX3A6NHT5 357 aa15.15■□□□□ 0.02
COPS3-212ENST00000539941 METTL15A6NJ78 407 aa15.15■□□□□ 0.02
COPS3-212ENST00000539941 A6NL46 340 aa15.15■□□□□ 0.02
COPS3-212ENST00000539941 KIR3DP1A8MWS1 328 aa15.15■□□□□ 0.02
COPS3-212ENST00000539941 TBX1O43435 398 aa15.15■□□□□ 0.02
COPS3-212ENST00000539941 SERPINI2O75830 405 aa15.15■□□□□ 0.02
COPS3-212ENST00000539941 TSPAN9O75954 239 aa15.15■□□□□ 0.02
COPS3-212ENST00000539941 CTAG1AP78358 180 aa15.15■□□□□ 0.02
COPS3-212ENST00000539941 OR1C1Q15619 314 aa15.15■□□□□ 0.02
COPS3-212ENST00000539941 B3GLCTQ6Y288 498 aa15.15■□□□□ 0.02
COPS3-212ENST00000539941 ZNF767PQ75MW2 155 aa15.15■□□□□ 0.02
COPS3-212ENST00000539941 PXKQ7Z7A4 578 aa15.15■□□□□ 0.02
COPS3-212ENST00000539941 VASH2Q86V25 355 aa15.15■□□□□ 0.02
COPS3-212ENST00000539941 LIX1LQ8IVB5 337 aa15.15■□□□□ 0.02
COPS3-212ENST00000539941 OR10H4Q8NGA5 316 aa15.15■□□□□ 0.02
COPS3-212ENST00000539941 SMPDL3BQ92485 455 aa15.15■□□□□ 0.02
COPS3-212ENST00000539941 MIB2Q96AX9 1013 aa15.15■□□□□ 0.02
COPS3-212ENST00000539941 ZMYND19Q96E35 227 aaPredicted RBP15.15■□□□□ 0.02
COPS3-212ENST00000539941 C5orf34Q96MH7 638 aa15.15■□□□□ 0.02
COPS3-212ENST00000539941 RNF32Q9H0A6 362 aa15.15■□□□□ 0.02
COPS3-212ENST00000539941 DEPPQ9NTK1 212 aa15.15■□□□□ 0.02
COPS3-212ENST00000539941 VSX1Q9NZR4 365 aaPredicted RBP15.15■□□□□ 0.02
COPS3-212ENST00000539941 RPH3AQ9Y2J0 694 aaPredicted RBP15.15■□□□□ 0.02
COPS3-212ENST00000539941 FREM2Q5SZK8 3169 aa15.15■□□□□ 0.02
COPS3-212ENST00000539941 DAPL1A0PJW8 107 aa15.14■□□□□ 0.01
COPS3-212ENST00000539941 OR2M5A3KFT3 312 aa15.14■□□□□ 0.01
COPS3-212ENST00000539941 PRSS37A4D1T9 235 aa15.14■□□□□ 0.01
COPS3-212ENST00000539941 ARGFXA6NJG6 315 aa15.14■□□□□ 0.01
COPS3-212ENST00000539941 GJE1A6NN92 205 aa15.14■□□□□ 0.01
COPS3-212ENST00000539941 AIREO43918 545 aa15.14■□□□□ 0.01
COPS3-212ENST00000539941 PMS2P2O95744 297 aa15.14■□□□□ 0.01
COPS3-212ENST00000539941 WDPCPO95876 746 aa15.14■□□□□ 0.01
COPS3-212ENST00000539941 OR2T7P0C7T2 308 aa15.14■□□□□ 0.01
COPS3-212ENST00000539941 IGF2RP11717 2491 aa15.14■□□□□ 0.01
COPS3-212ENST00000539941 CPEP16870 476 aa15.14■□□□□ 0.01
COPS3-212ENST00000539941 IL32P24001 234 aa15.14■□□□□ 0.01
COPS3-212ENST00000539941 ACVR1BP36896 505 aa15.14■□□□□ 0.01
COPS3-212ENST00000539941 OR3A3P47888 321 aa15.14■□□□□ 0.01
COPS3-212ENST00000539941 CENPAP49450 140 aa15.14■□□□□ 0.01
COPS3-212ENST00000539941 RAC1P63000 192 aa15.14■□□□□ 0.01
COPS3-212ENST00000539941 SLC35A1P78382 337 aa15.14■□□□□ 0.01
COPS3-212ENST00000539941 FOXK1P85037 733 aa15.14■□□□□ 0.01
COPS3-212ENST00000539941 BDH1Q02338 343 aa15.14■□□□□ 0.01
COPS3-212ENST00000539941 GALEQ14376 348 aa15.14■□□□□ 0.01
COPS3-212ENST00000539941 TMEM176BQ3YBM2 270 aaPredicted RBP15.14■□□□□ 0.01
COPS3-212ENST00000539941 LINC01590Q5TEZ4 76 aa15.14■□□□□ 0.01
COPS3-212ENST00000539941 OR2G6Q5TZ20 316 aa15.14■□□□□ 0.01
COPS3-212ENST00000539941 TMPPEQ6ZT21 453 aa15.14■□□□□ 0.01
COPS3-212ENST00000539941 ATCAYQ86WG3 371 aa15.14■□□□□ 0.01
COPS3-212ENST00000539941 SNX29P2Q8IUI4 249 aa15.14■□□□□ 0.01
COPS3-212ENST00000539941 SLC38A6Q8IZM9 456 aa15.14■□□□□ 0.01
COPS3-212ENST00000539941 TMEM99Q8N816 258 aa15.14■□□□□ 0.01
COPS3-212ENST00000539941 OR2T27Q8NH04 317 aa15.14■□□□□ 0.01
COPS3-212ENST00000539941 KCNE4Q8WWG9 221 aa15.14■□□□□ 0.01
COPS3-212ENST00000539941 UBL7Q96S82 380 aaPredicted RBP15.14■□□□□ 0.01
COPS3-212ENST00000539941 ALG12Q9BV10 488 aa15.14■□□□□ 0.01
COPS3-212ENST00000539941 TMEM185BQ9H7F4 350 aa15.14■□□□□ 0.01
COPS3-212ENST00000539941 NDUFB11Q9NX14 153 aa15.14■□□□□ 0.01
COPS3-212ENST00000539941 FKBP7Q9Y680 259 aa15.14■□□□□ 0.01
COPS3-212ENST00000539941 NPIPA5E9PKD4 350 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms