RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 FBXL4Q9UKA2 621 aa15.41■□□□□ 0.06
PCDHB17P-201ENST00000539533 VDAC3Q9Y277 283 aa15.41■□□□□ 0.06
PCDHB17P-201ENST00000539533 TMED7Q9Y3B3 224 aa15.41■□□□□ 0.06
PCDHB17P-201ENST00000539533 IER3IP1Q9Y5U9 82 aa15.41■□□□□ 0.06
PCDHB17P-201ENST00000539533 PCSK5Q92824 1860 aa15.41■□□□□ 0.06
PCDHB17P-201ENST00000539533 CELSR3Q9NYQ7 3312 aa15.41■□□□□ 0.06
PCDHB17P-201ENST00000539533 ZFHX2Q9C0A1 2572 aaPredicted RBP15.41■□□□□ 0.06
PCDHB17P-201ENST00000539533 TMEM72A0PK05 275 aa15.41■□□□□ 0.06
PCDHB17P-201ENST00000539533 ANKUB1A6NFN9 424 aa15.41■□□□□ 0.06
PCDHB17P-201ENST00000539533 IGF2P01344 180 aa15.41■□□□□ 0.06
PCDHB17P-201ENST00000539533 ASAH2BP0C7U1 165 aa15.41■□□□□ 0.06
PCDHB17P-201ENST00000539533 ZNF250P15622 560 aa15.41■□□□□ 0.06
PCDHB17P-201ENST00000539533 RBMS1P29558 406 aaKnown RBP15.41■□□□□ 0.06
PCDHB17P-201ENST00000539533 BTCP35070 178 aa15.41■□□□□ 0.06
PCDHB17P-201ENST00000539533 AQP2P41181 271 aa15.41■□□□□ 0.06
PCDHB17P-201ENST00000539533 PITPNBP48739 271 aa15.41■□□□□ 0.06
PCDHB17P-201ENST00000539533 RPS19BP1Q86WX3 136 aaKnown RBP15.41■□□□□ 0.06
PCDHB17P-201ENST00000539533 ACBD7Q8N6N7 88 aa15.41■□□□□ 0.06
PCDHB17P-201ENST00000539533 SAMD12Q8N8I0 201 aa15.41■□□□□ 0.06
PCDHB17P-201ENST00000539533 LIPHQ8WWY8 451 aa15.41■□□□□ 0.06
PCDHB17P-201ENST00000539533 PPP4R1LQ9P1A2 415 aa15.41■□□□□ 0.06
PCDHB17P-201ENST00000539533 ELF5Q9UKW6 265 aaPredicted RBP15.41■□□□□ 0.06
PCDHB17P-201ENST00000539533 ING4Q9UNL4 249 aa15.41■□□□□ 0.06
PCDHB17P-201ENST00000539533 MRPS18BQ9Y676 258 aaKnown RBP15.41■□□□□ 0.06
PCDHB17P-201ENST00000539533 CHCHD2Q9Y6H1 151 aaPredicted RBP15.41■□□□□ 0.06
PCDHB17P-201ENST00000539533 SUSD5O60279 629 aa15.4■□□□□ 0.06
PCDHB17P-201ENST00000539533 THBS2P35442 1172 aa15.4■□□□□ 0.06
PCDHB17P-201ENST00000539533 IL10RAQ13651 578 aa15.4■□□□□ 0.06
PCDHB17P-201ENST00000539533 CRMP1Q14194 572 aa15.4■□□□□ 0.06
PCDHB17P-201ENST00000539533 PRAMEF20Q5VT98 475 aa15.4■□□□□ 0.06
PCDHB17P-201ENST00000539533 OR4K13Q8NH42 304 aa15.4■□□□□ 0.06
PCDHB17P-201ENST00000539533 KCTD12Q96CX2 325 aaKnown RBP15.4■□□□□ 0.06
PCDHB17P-201ENST00000539533 GPR137Q96N19 417 aa15.4■□□□□ 0.06
PCDHB17P-201ENST00000539533 TIMP4Q99727 224 aa15.4■□□□□ 0.06
PCDHB17P-201ENST00000539533 ALG8Q9BVK2 526 aa15.4■□□□□ 0.06
PCDHB17P-201ENST00000539533 FN3KQ9H479 309 aa15.4■□□□□ 0.06
PCDHB17P-201ENST00000539533 MRPL39Q9NYK5 338 aaKnown RBP15.4■□□□□ 0.06
PCDHB17P-201ENST00000539533 BAIAP2Q9UQB8 552 aa15.4■□□□□ 0.06
PCDHB17P-201ENST00000539533 WIF1Q9Y5W5 379 aa15.4■□□□□ 0.06
PCDHB17P-201ENST00000539533 CACNG2Q9Y698 323 aa15.4■□□□□ 0.06
PCDHB17P-201ENST00000539533 EML6Q6ZMW3 1958 aa15.4■□□□□ 0.06
PCDHB17P-201ENST00000539533 A0A1B0GVC2 190 aa15.4■□□□□ 0.06
PCDHB17P-201ENST00000539533 C7orf66A4D0T2 115 aa15.4■□□□□ 0.06
PCDHB17P-201ENST00000539533 A6NIN4 97 aa15.4■□□□□ 0.06
PCDHB17P-201ENST00000539533 EEF1E1O43324 174 aaKnown RBP15.4■□□□□ 0.06
PCDHB17P-201ENST00000539533 SLC25A12O75746 678 aa15.4■□□□□ 0.06
PCDHB17P-201ENST00000539533 DHFRP00374 187 aa15.4■□□□□ 0.06
PCDHB17P-201ENST00000539533 CLUP10909 449 aa15.4■□□□□ 0.06
PCDHB17P-201ENST00000539533 HIST1H1CP16403 213 aaKnown RBP15.4■□□□□ 0.06
PCDHB17P-201ENST00000539533 AHCYP23526 432 aa15.4■□□□□ 0.06
PCDHB17P-201ENST00000539533 SHC1P29353 583 aa15.4■□□□□ 0.06
PCDHB17P-201ENST00000539533 NIPAL3Q6P499 406 aa15.4■□□□□ 0.06
PCDHB17P-201ENST00000539533 TEX261Q6UWH6 196 aa15.4■□□□□ 0.06
PCDHB17P-201ENST00000539533 ZNF431Q8TF32 576 aaPredicted RBP15.4■□□□□ 0.06
PCDHB17P-201ENST00000539533 OR11A1Q9GZK7 315 aa15.4■□□□□ 0.06
PCDHB17P-201ENST00000539533 KLHL1Q9NR64 748 aa15.4■□□□□ 0.06
PCDHB17P-201ENST00000539533 P4HTMQ9NXG6 502 aa15.4■□□□□ 0.06
PCDHB17P-201ENST00000539533 RASD1Q9Y272 281 aa15.4■□□□□ 0.06
PCDHB17P-201ENST00000539533 U3KQ87 197 aa15.4■□□□□ 0.06
PCDHB17P-201ENST00000539533 MUC6Q6W4X9 2439 aa15.39■□□□□ 0.05
PCDHB17P-201ENST00000539533 LOC101059948A0A1B0GTJ6 334 aa15.39■□□□□ 0.05
PCDHB17P-201ENST00000539533 CIB4A0PJX0 185 aa15.39■□□□□ 0.05
PCDHB17P-201ENST00000539533 RIIAD1A6NNX1 92 aa15.39■□□□□ 0.05
PCDHB17P-201ENST00000539533 SHISA8B8ZZ34 492 aa15.39■□□□□ 0.05
PCDHB17P-201ENST00000539533 PRR23D1E9PI22 279 aaPredicted RBP15.39■□□□□ 0.05
PCDHB17P-201ENST00000539533 PRR23D2P0DMB1 279 aaPredicted RBP15.39■□□□□ 0.05
PCDHB17P-201ENST00000539533 ATF4P18848 351 aaPredicted RBP15.39■□□□□ 0.05
PCDHB17P-201ENST00000539533 NPR2P20594 1047 aa15.39■□□□□ 0.05
PCDHB17P-201ENST00000539533 PAICSP22234 425 aaKnown RBP15.39■□□□□ 0.05
PCDHB17P-201ENST00000539533 ENPP1P22413 925 aa15.39■□□□□ 0.05
PCDHB17P-201ENST00000539533 STOMP27105 288 aa15.39■□□□□ 0.05
PCDHB17P-201ENST00000539533 NBL1P41271 181 aa15.39■□□□□ 0.05
PCDHB17P-201ENST00000539533 MLF1P58340 268 aa15.39■□□□□ 0.05
PCDHB17P-201ENST00000539533 ERVK-25P63136 954 aa15.39■□□□□ 0.05
PCDHB17P-201ENST00000539533 KLHL12Q53G59 568 aa15.39■□□□□ 0.05
PCDHB17P-201ENST00000539533 OPN5Q6U736 354 aa15.39■□□□□ 0.05
PCDHB17P-201ENST00000539533 DPY19L2P2Q6ZN68 376 aa15.39■□□□□ 0.05
PCDHB17P-201ENST00000539533 GID4Q8IVV7 300 aa15.39■□□□□ 0.05
PCDHB17P-201ENST00000539533 SLC43A2Q8N370 569 aa15.39■□□□□ 0.05
PCDHB17P-201ENST00000539533 TMEM99Q8N816 258 aa15.39■□□□□ 0.05
PCDHB17P-201ENST00000539533 ZNF680Q8NEM1 530 aa15.39■□□□□ 0.05
PCDHB17P-201ENST00000539533 OR11H7Q8NGC8 314 aa15.39■□□□□ 0.05
PCDHB17P-201ENST00000539533 OR52E2Q8NGJ4 325 aa15.39■□□□□ 0.05
PCDHB17P-201ENST00000539533 TMEM234Q8WY98 164 aa15.39■□□□□ 0.05
PCDHB17P-201ENST00000539533 SCMH1Q96GD3 660 aa15.39■□□□□ 0.05
PCDHB17P-201ENST00000539533 TBX5Q99593 518 aa15.39■□□□□ 0.05
PCDHB17P-201ENST00000539533 GHITMQ9H3K2 345 aa15.39■□□□□ 0.05
PCDHB17P-201ENST00000539533 NRIP3Q9NQ35 241 aa15.39■□□□□ 0.05
PCDHB17P-201ENST00000539533 NUDT15Q9NV35 164 aa15.39■□□□□ 0.05
PCDHB17P-201ENST00000539533 HIF3AQ9Y2N7 669 aa15.39■□□□□ 0.05
PCDHB17P-201ENST00000539533 AUP1Q9Y679 476 aa15.39■□□□□ 0.05
PCDHB17P-201ENST00000539533 TRAV6A0A075B6T7 132 aa15.39■□□□□ 0.05
PCDHB17P-201ENST00000539533 TP53I11O14683 189 aa15.39■□□□□ 0.05
PCDHB17P-201ENST00000539533 TERTO14746 1132 aaKnown RBP15.39■□□□□ 0.05
PCDHB17P-201ENST00000539533 RAD1O60671 282 aa15.39■□□□□ 0.05
PCDHB17P-201ENST00000539533 SSR4P51571 173 aa15.39■□□□□ 0.05
PCDHB17P-201ENST00000539533 OR10A3P58181 314 aa15.39■□□□□ 0.05
PCDHB17P-201ENST00000539533 PRPS1P60891 318 aa15.39■□□□□ 0.05
PCDHB17P-201ENST00000539533 FAM27D1Q5T7N8 215 aa15.39■□□□□ 0.05
PCDHB17P-201ENST00000539533 SFXN4Q6P4A7 337 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms