RNA–Protein interactions for RNA: ENST00000538686.6

USP3-203, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-203ENST00000538686 NMES1Q9C002 83 aa11.36□□□□□ -0.59
USP3-203ENST00000538686 SMDT1Q9H4I9 107 aa11.36□□□□□ -0.59
USP3-203ENST00000538686 TMEM30AQ9NV96 361 aa11.36□□□□□ -0.59
USP3-203ENST00000538686 IL17CQ9P0M4 197 aa11.36□□□□□ -0.59
USP3-203ENST00000538686 P2RX2Q9UBL9 471 aa11.36□□□□□ -0.59
USP3-203ENST00000538686 KCNG2Q9UJ96 466 aa11.36□□□□□ -0.59
USP3-203ENST00000538686 MCM3APO60318 1980 aa11.35□□□□□ -0.59
USP3-203ENST00000538686 H7C4K7 107 aa11.35□□□□□ -0.59
USP3-203ENST00000538686 CBR3O75828 277 aa11.35□□□□□ -0.59
USP3-203ENST00000538686 HLA-AP01891 365 aaKnown RBP11.35□□□□□ -0.59
USP3-203ENST00000538686 AQP2P41181 271 aa11.35□□□□□ -0.59
USP3-203ENST00000538686 CX3CR1P49238 355 aa11.35□□□□□ -0.59
USP3-203ENST00000538686 SOX8P57073 446 aa11.35□□□□□ -0.59
USP3-203ENST00000538686 TAS2R41P59536 307 aa11.35□□□□□ -0.59
USP3-203ENST00000538686 ERVFC1-1P60608 527 aa11.35□□□□□ -0.59
USP3-203ENST00000538686 ST3GAL3Q11203 375 aa11.35□□□□□ -0.59
USP3-203ENST00000538686 FRRS1Q6ZNA5 592 aa11.35□□□□□ -0.59
USP3-203ENST00000538686 SLC35D2Q76EJ3 337 aa11.35□□□□□ -0.59
USP3-203ENST00000538686 SLC16A14Q7RTX9 510 aa11.35□□□□□ -0.59
USP3-203ENST00000538686 LYG2Q86SG7 212 aa11.35□□□□□ -0.59
USP3-203ENST00000538686 ZNF573Q86YE8 665 aa11.35□□□□□ -0.59
USP3-203ENST00000538686 MMP21Q8N119 569 aa11.35□□□□□ -0.59
USP3-203ENST00000538686 SYS1Q8N2H4 156 aa11.35□□□□□ -0.59
USP3-203ENST00000538686 WFIKKN2Q8TEU8 576 aa11.35□□□□□ -0.59
USP3-203ENST00000538686 NPRL2Q8WTW4 380 aa11.35□□□□□ -0.59
USP3-203ENST00000538686 TAAR8Q969N4 342 aa11.35□□□□□ -0.59
USP3-203ENST00000538686 TMEM169Q96HH4 297 aa11.35□□□□□ -0.59
USP3-203ENST00000538686 FAM46AQ96IP4 442 aaKnown RBP11.35□□□□□ -0.59
USP3-203ENST00000538686 SEC22AQ96IW7 307 aa11.35□□□□□ -0.59
USP3-203ENST00000538686 HIST1H2BLQ99880 126 aa11.35□□□□□ -0.59
USP3-203ENST00000538686 SLC25A31Q9H0C2 315 aa11.35□□□□□ -0.59
USP3-203ENST00000538686 SGK2Q9HBY8 427 aa11.35□□□□□ -0.59
USP3-203ENST00000538686 POT1Q9NUX5 634 aa11.35□□□□□ -0.59
USP3-203ENST00000538686 IL20RAQ9UHF4 553 aa11.35□□□□□ -0.59
USP3-203ENST00000538686 ZNF107Q9UII5 783 aaPredicted RBP11.35□□□□□ -0.59
USP3-203ENST00000538686 PITPNC1Q9UKF7 332 aa11.35□□□□□ -0.59
USP3-203ENST00000538686 CSAG2Q9Y5P2 127 aa11.35□□□□□ -0.59
USP3-203ENST00000538686 MRPL42Q9Y6G3 142 aaKnown RBP11.35□□□□□ -0.59
USP3-203ENST00000538686 A0A1W2PPK0 400 aa11.34□□□□□ -0.59
USP3-203ENST00000538686 DRGXA6NNA5 263 aa11.34□□□□□ -0.59
USP3-203ENST00000538686 CDC14BO60729 498 aa11.34□□□□□ -0.59
USP3-203ENST00000538686 HNF1AP20823 631 aa11.34□□□□□ -0.59
USP3-203ENST00000538686 UCP2P55851 309 aa11.34□□□□□ -0.59
USP3-203ENST00000538686 OR12D2P58182 307 aa11.34□□□□□ -0.59
USP3-203ENST00000538686 RBX1P62877 108 aa11.34□□□□□ -0.59
USP3-203ENST00000538686 LY6KQ17RY6 165 aa11.34□□□□□ -0.59
USP3-203ENST00000538686 DMRTA1Q5VZB9 504 aa11.34□□□□□ -0.59
USP3-203ENST00000538686 OR2T2Q6IF00 324 aa11.34□□□□□ -0.59
USP3-203ENST00000538686 FAM71E1Q6IPT2 247 aa11.34□□□□□ -0.59
USP3-203ENST00000538686 GDF6Q6KF10 455 aaPredicted RBP11.34□□□□□ -0.59
USP3-203ENST00000538686 FAHD2BQ6P2I3 314 aaPredicted RBP11.34□□□□□ -0.59
USP3-203ENST00000538686 TMEM229BQ8NBD8 167 aa11.34□□□□□ -0.59
USP3-203ENST00000538686 MITD1Q8WV92 249 aa11.34□□□□□ -0.59
USP3-203ENST00000538686 COL26A1Q96A83 441 aa11.34□□□□□ -0.59
USP3-203ENST00000538686 FAHD2AQ96GK7 314 aa11.34□□□□□ -0.59
USP3-203ENST00000538686 PPP1R16AQ96I34 528 aa11.34□□□□□ -0.59
USP3-203ENST00000538686 SPATA33Q96N06 139 aa11.34□□□□□ -0.59
USP3-203ENST00000538686 WFIKKN1Q96NZ8 548 aa11.34□□□□□ -0.59
USP3-203ENST00000538686 OR14A2Q96R54 314 aa11.34□□□□□ -0.59
USP3-203ENST00000538686 OR2AG1Q9H205 316 aa11.34□□□□□ -0.59
USP3-203ENST00000538686 NEUROD4Q9HD90 331 aa11.34□□□□□ -0.59
USP3-203ENST00000538686 KCNJ16Q9NPI9 418 aa11.34□□□□□ -0.59
USP3-203ENST00000538686 GLRX2Q9NS18 164 aa11.34□□□□□ -0.59
USP3-203ENST00000538686 HAO2Q9NYQ3 351 aa11.34□□□□□ -0.59
USP3-203ENST00000538686 CNIH4Q9P003 139 aa11.34□□□□□ -0.59
USP3-203ENST00000538686 PCYT1BQ9Y5K3 369 aaPredicted RBP11.34□□□□□ -0.59
USP3-203ENST00000538686 BRWD3Q6RI45 1802 aa11.34□□□□□ -0.59
USP3-203ENST00000538686 A0A1W2PN81 502 aa11.34□□□□□ -0.59
USP3-203ENST00000538686 TMEM235A6NFC5 223 aa11.34□□□□□ -0.59
USP3-203ENST00000538686 TSPAN2O60636 221 aa11.34□□□□□ -0.59
USP3-203ENST00000538686 TSPAN15O95858 294 aa11.34□□□□□ -0.59
USP3-203ENST00000538686 MPC1LP0DKB6 136 aa11.34□□□□□ -0.59
USP3-203ENST00000538686 ACRV1P26436 265 aa11.34□□□□□ -0.59
USP3-203ENST00000538686 CHATP28329 748 aa11.34□□□□□ -0.59
USP3-203ENST00000538686 AKT2P31751 481 aa11.34□□□□□ -0.59
USP3-203ENST00000538686 CHRNA7P36544 502 aa11.34□□□□□ -0.59
USP3-203ENST00000538686 OR3A1P47881 315 aa11.34□□□□□ -0.59
USP3-203ENST00000538686 CCL23P55773 120 aa11.34□□□□□ -0.59
USP3-203ENST00000538686 ZNF85Q03923 595 aa11.34□□□□□ -0.59
USP3-203ENST00000538686 DECR1Q16698 335 aa11.34□□□□□ -0.59
USP3-203ENST00000538686 CHRFAM7AQ494W8 412 aa11.34□□□□□ -0.59
USP3-203ENST00000538686 FBXW9Q5XUX1 488 aa11.34□□□□□ -0.59
USP3-203ENST00000538686 FOXRED2Q8IWF2 684 aa11.34□□□□□ -0.59
USP3-203ENST00000538686 JAGN1Q8N5M9 183 aa11.34□□□□□ -0.59
USP3-203ENST00000538686 MFSD9Q8NBP5 474 aa11.34□□□□□ -0.59
USP3-203ENST00000538686 CLEC1AQ8NC01 280 aa11.34□□□□□ -0.59
USP3-203ENST00000538686 OR5P2Q8WZ92 322 aa11.34□□□□□ -0.59
USP3-203ENST00000538686 CLP1Q92989 425 aaKnown RBP11.34□□□□□ -0.59
USP3-203ENST00000538686 KISS1RQ969F8 398 aaPredicted RBP11.34□□□□□ -0.59
USP3-203ENST00000538686 AMDHD1Q96NU7 426 aa11.34□□□□□ -0.59
USP3-203ENST00000538686 AQP10Q96PS8 301 aa11.34□□□□□ -0.59
USP3-203ENST00000538686 PBDC1Q9BVG4 233 aa11.34□□□□□ -0.59
USP3-203ENST00000538686 SLC6A16Q9GZN6 736 aa11.34□□□□□ -0.59
USP3-203ENST00000538686 RAB33BQ9H082 229 aa11.34□□□□□ -0.59
USP3-203ENST00000538686 PRM3Q9NNZ6 103 aa11.34□□□□□ -0.59
USP3-203ENST00000538686 ANKRD10Q9NXR5 420 aa11.34□□□□□ -0.59
USP3-203ENST00000538686 TRPC4Q9UBN4 977 aa11.34□□□□□ -0.59
USP3-203ENST00000538686 AGPAT2O15120 278 aa11.33□□□□□ -0.6
USP3-203ENST00000538686 HCRTR2O43614 444 aa11.33□□□□□ -0.6
USP3-203ENST00000538686 LRP3O75074 770 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms