RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 THEM6Q8WUY1 208 aa12.23□□□□□ -0.45
SMG6-203ENST00000536871 OR8B4Q96RC9 309 aa12.23□□□□□ -0.45
SMG6-203ENST00000536871 DHRS9Q9BPW9 319 aa12.23□□□□□ -0.45
SMG6-203ENST00000536871 NOX4Q9NPH5 578 aa12.23□□□□□ -0.45
SMG6-203ENST00000536871 NPIPA1Q9UND3 350 aa12.23□□□□□ -0.45
SMG6-203ENST00000536871 CAMK2AQ9UQM7 478 aa12.23□□□□□ -0.45
SMG6-203ENST00000536871 B3GALT1Q9Y5Z6 326 aa12.23□□□□□ -0.45
SMG6-203ENST00000536871 ETV7Q9Y603 341 aa12.23□□□□□ -0.45
SMG6-203ENST00000536871 UNC13CQ8NB66 2214 aa12.23□□□□□ -0.45
SMG6-203ENST00000536871 IGLV1-36A0A0B4J1U3 117 aa12.23□□□□□ -0.45
SMG6-203ENST00000536871 FAM240BA0A1B0GVZ2 78 aa12.23□□□□□ -0.45
SMG6-203ENST00000536871 HMX3A6NHT5 357 aa12.23□□□□□ -0.45
SMG6-203ENST00000536871 FAM171A2A8MVW0 826 aa12.23□□□□□ -0.45
SMG6-203ENST00000536871 DCTN6O00399 190 aa12.23□□□□□ -0.45
SMG6-203ENST00000536871 DVL2O14641 736 aa12.23□□□□□ -0.45
SMG6-203ENST00000536871 PLA2G10O15496 165 aa12.23□□□□□ -0.45
SMG6-203ENST00000536871 HLA-DQA2P01906 255 aa12.23□□□□□ -0.45
SMG6-203ENST00000536871 RAB40ALP0C0E4 278 aa12.23□□□□□ -0.45
SMG6-203ENST00000536871 OR8G3PP0DMU2 310 aa12.23□□□□□ -0.45
SMG6-203ENST00000536871 MMP15P51511 669 aa12.23□□□□□ -0.45
SMG6-203ENST00000536871 OR10A3P58181 314 aa12.23□□□□□ -0.45
SMG6-203ENST00000536871 C3orf33Q6P1S2 294 aa12.23□□□□□ -0.45
SMG6-203ENST00000536871 CDH24Q86UP0 819 aa12.23□□□□□ -0.45
SMG6-203ENST00000536871 OR4M1Q8NGD0 313 aa12.23□□□□□ -0.45
SMG6-203ENST00000536871 OR2G2Q8NGZ5 317 aa12.23□□□□□ -0.45
SMG6-203ENST00000536871 RAB40AQ8WXH6 277 aa12.23□□□□□ -0.45
SMG6-203ENST00000536871 MAP6Q96JE9 813 aa12.23□□□□□ -0.45
SMG6-203ENST00000536871 KLHDC3Q9BQ90 382 aa12.23□□□□□ -0.45
SMG6-203ENST00000536871 TTTY10Q9BZA0 68 aa12.23□□□□□ -0.45
SMG6-203ENST00000536871 APMAPQ9HDC9 416 aa12.23□□□□□ -0.45
SMG6-203ENST00000536871 BRD7Q9NPI1 651 aa12.23□□□□□ -0.45
SMG6-203ENST00000536871 V9GY05 133 aa12.23□□□□□ -0.45
SMG6-203ENST00000536871 TRIOBPQ9H2D6 2365 aa12.23□□□□□ -0.45
SMG6-203ENST00000536871 A0A1W2PQ72 361 aa12.22□□□□□ -0.45
SMG6-203ENST00000536871 MEIOCA2RUB1 952 aa12.22□□□□□ -0.45
SMG6-203ENST00000536871 IFITM5A6NNB3 132 aa12.22□□□□□ -0.45
SMG6-203ENST00000536871 TTLL8A6PVC2 850 aa12.22□□□□□ -0.45
SMG6-203ENST00000536871 B4DXG7 233 aa12.22□□□□□ -0.45
SMG6-203ENST00000536871 H7C1C5 153 aa12.22□□□□□ -0.45
SMG6-203ENST00000536871 ZNF593O00488 134 aaPredicted RBP12.22□□□□□ -0.45
SMG6-203ENST00000536871 GPR171O14626 319 aa12.22□□□□□ -0.45
SMG6-203ENST00000536871 SULT1B1O43704 296 aa12.22□□□□□ -0.45
SMG6-203ENST00000536871 ORC5O43913 435 aa12.22□□□□□ -0.45
SMG6-203ENST00000536871 SLC16A7O60669 478 aa12.22□□□□□ -0.45
SMG6-203ENST00000536871 CCNKO75909 580 aa12.22□□□□□ -0.45
SMG6-203ENST00000536871 AKR7A3O95154 331 aa12.22□□□□□ -0.45
SMG6-203ENST00000536871 PDGFBP01127 241 aaPredicted RBP12.22□□□□□ -0.45
SMG6-203ENST00000536871 HRGP04196 525 aa12.22□□□□□ -0.45
SMG6-203ENST00000536871 EIF4EP06730 217 aaKnown RBP12.22□□□□□ -0.45
SMG6-203ENST00000536871 ACP1P24666 158 aa12.22□□□□□ -0.45
SMG6-203ENST00000536871 HLA-DMAP28067 261 aa12.22□□□□□ -0.45
SMG6-203ENST00000536871 NANOS3P60323 173 aaKnown RBP12.22□□□□□ -0.45
SMG6-203ENST00000536871 LCN6P62502 163 aa12.22□□□□□ -0.45
SMG6-203ENST00000536871 MRPS10P82664 201 aaKnown RBP12.22□□□□□ -0.45
SMG6-203ENST00000536871 TLE3Q04726 772 aa12.22□□□□□ -0.45
SMG6-203ENST00000536871 PCOLCEQ15113 449 aa12.22□□□□□ -0.45
SMG6-203ENST00000536871 CDK10Q15131 360 aa12.22□□□□□ -0.45
SMG6-203ENST00000536871 ZNF528Q3MIS6 628 aa12.22□□□□□ -0.45
SMG6-203ENST00000536871 FAM69BQ5VUD6 431 aa12.22□□□□□ -0.45
SMG6-203ENST00000536871 ZNF57Q68EA5 555 aaPredicted RBP12.22□□□□□ -0.45
SMG6-203ENST00000536871 DEGS2Q6QHC5 323 aa12.22□□□□□ -0.45
SMG6-203ENST00000536871 ZNF676Q8N7Q3 588 aa12.22□□□□□ -0.45
SMG6-203ENST00000536871 OR13C5Q8NGS8 318 aa12.22□□□□□ -0.45
SMG6-203ENST00000536871 THAP3Q8WTV1 239 aaPredicted RBP12.22□□□□□ -0.45
SMG6-203ENST00000536871 ASB10Q8WXI3 467 aa12.22□□□□□ -0.45
SMG6-203ENST00000536871 ZBTB8AQ96BR9 441 aa12.22□□□□□ -0.45
SMG6-203ENST00000536871 CMKLR1Q99788 373 aa12.22□□□□□ -0.45
SMG6-203ENST00000536871 ZPBPQ9BS86 351 aa12.22□□□□□ -0.45
SMG6-203ENST00000536871 THAP7Q9BT49 309 aaPredicted RBP12.22□□□□□ -0.45
SMG6-203ENST00000536871 HDHD2Q9H0R4 259 aa12.22□□□□□ -0.45
SMG6-203ENST00000536871 MED11Q9P086 117 aa12.22□□□□□ -0.45
SMG6-203ENST00000536871 FRRS1LQ9P0K9 344 aa12.22□□□□□ -0.45
SMG6-203ENST00000536871 COPZ2Q9P299 210 aa12.22□□□□□ -0.45
SMG6-203ENST00000536871 ZNF221Q9UK13 617 aa12.22□□□□□ -0.45
SMG6-203ENST00000536871 RPH3AQ9Y2J0 694 aaPredicted RBP12.22□□□□□ -0.45
SMG6-203ENST00000536871 TVP23AA6NH52 213 aa12.21□□□□□ -0.45
SMG6-203ENST00000536871 LIPT2A6NK58 231 aa12.21□□□□□ -0.45
SMG6-203ENST00000536871 OR4C45A6NMZ5 311 aa12.21□□□□□ -0.45
SMG6-203ENST00000536871 MAGEB4O15481 346 aaPredicted RBP12.21□□□□□ -0.45
SMG6-203ENST00000536871 GSTZ1O43708 216 aaPredicted RBP12.21□□□□□ -0.45
SMG6-203ENST00000536871 SLC43A1O75387 559 aa12.21□□□□□ -0.45
SMG6-203ENST00000536871 KHDRBS3O75525 346 aaKnown RBP12.21□□□□□ -0.45
SMG6-203ENST00000536871 OR2J2O76002 312 aa12.21□□□□□ -0.45
SMG6-203ENST00000536871 AQP8O94778 261 aa12.21□□□□□ -0.45
SMG6-203ENST00000536871 NR2C1P13056 603 aa12.21□□□□□ -0.45
SMG6-203ENST00000536871 ZNF823P16415 610 aa12.21□□□□□ -0.45
SMG6-203ENST00000536871 ATF1P18846 271 aa12.21□□□□□ -0.45
SMG6-203ENST00000536871 CFPP27918 469 aa12.21□□□□□ -0.45
SMG6-203ENST00000536871 DDOSTP39656 456 aa12.21□□□□□ -0.45
SMG6-203ENST00000536871 P2RX3P56373 397 aa12.21□□□□□ -0.45
SMG6-203ENST00000536871 GPR85P60893 370 aa12.21□□□□□ -0.45
SMG6-203ENST00000536871 INSM1Q01101 510 aaPredicted RBP12.21□□□□□ -0.45
SMG6-203ENST00000536871 FOXF1Q12946 379 aa12.21□□□□□ -0.45
SMG6-203ENST00000536871 SLC17A1Q14916 467 aa12.21□□□□□ -0.45
SMG6-203ENST00000536871 BTBD16Q32M84 506 aa12.21□□□□□ -0.45
SMG6-203ENST00000536871 PLPPR5Q32ZL2 321 aa12.21□□□□□ -0.45
SMG6-203ENST00000536871 SLC25A35Q3KQZ1 300 aa12.21□□□□□ -0.45
SMG6-203ENST00000536871 OR2Y1Q8NGV0 311 aa12.21□□□□□ -0.45
SMG6-203ENST00000536871 RNF128Q8TEB7 428 aa12.21□□□□□ -0.45
SMG6-203ENST00000536871 MR1Q95460 341 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms