RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 SGCAQ16586 387 aa3.68□□□□□ -1.82
PRKDC-208ENST00000536710 COA6Q5JTJ3 125 aaKnown RBP3.68□□□□□ -1.82
PRKDC-208ENST00000536710 COX15Q7KZN9 410 aa3.68□□□□□ -1.82
PRKDC-208ENST00000536710 SLC16A14Q7RTX9 510 aa3.68□□□□□ -1.82
PRKDC-208ENST00000536710 PEX26Q7Z412 305 aa3.68□□□□□ -1.82
PRKDC-208ENST00000536710 LINC01555Q8NAE3 123 aa3.68□□□□□ -1.82
PRKDC-208ENST00000536710 BBOF1Q8ND07 529 aa3.68□□□□□ -1.82
PRKDC-208ENST00000536710 OR6X1Q8NH79 312 aa3.68□□□□□ -1.82
PRKDC-208ENST00000536710 ZNF502Q8TBZ5 544 aa3.68□□□□□ -1.82
PRKDC-208ENST00000536710 HDHD3Q9BSH5 251 aaPredicted RBP3.68□□□□□ -1.82
PRKDC-208ENST00000536710 GABARAPL3Q9BY60 117 aa3.68□□□□□ -1.82
PRKDC-208ENST00000536710 UGT1A7Q9HAW7 530 aa3.68□□□□□ -1.82
PRKDC-208ENST00000536710 UGT1A10Q9HAW8 530 aa3.68□□□□□ -1.82
PRKDC-208ENST00000536710 UGT1A8Q9HAW9 530 aa3.68□□□□□ -1.82
PRKDC-208ENST00000536710 ABCB10Q9NRK6 738 aa3.68□□□□□ -1.82
PRKDC-208ENST00000536710 PTTG3PQ9NZH4 202 aa3.68□□□□□ -1.82
PRKDC-208ENST00000536710 UXTQ9UBK9 157 aaPredicted RBP3.68□□□□□ -1.82
PRKDC-208ENST00000536710 VANGL2Q9ULK5 521 aa3.68□□□□□ -1.82
PRKDC-208ENST00000536710 NEU3Q9UQ49 428 aa3.68□□□□□ -1.82
PRKDC-208ENST00000536710 GOLT1BQ9Y3E0 138 aa3.68□□□□□ -1.82
PRKDC-208ENST00000536710 A0A0B4J2A0 478 aa3.67□□□□□ -1.82
PRKDC-208ENST00000536710 TRBV11-1A0A0K0K1C0 115 aa3.67□□□□□ -1.82
PRKDC-208ENST00000536710 A0A1B0GUA9 196 aa3.67□□□□□ -1.82
PRKDC-208ENST00000536710 A0A1B0GVI7 797 aa3.67□□□□□ -1.82
PRKDC-208ENST00000536710 ZNF726A6NNF4 738 aa3.67□□□□□ -1.82
PRKDC-208ENST00000536710 WRBO00258 174 aa3.67□□□□□ -1.82
PRKDC-208ENST00000536710 XKRYO14609 159 aa3.67□□□□□ -1.82
PRKDC-208ENST00000536710 KRT6AP02538 564 aa3.67□□□□□ -1.82
PRKDC-208ENST00000536710 TDGF1P13385 188 aa3.67□□□□□ -1.82
PRKDC-208ENST00000536710 RCC1P18754 421 aaPredicted RBP3.67□□□□□ -1.82
PRKDC-208ENST00000536710 GTF2E2P29084 291 aaKnown RBP3.67□□□□□ -1.82
PRKDC-208ENST00000536710 DRD3P35462 400 aa3.67□□□□□ -1.82
PRKDC-208ENST00000536710 CSNK1DP48730 415 aa3.67□□□□□ -1.82
PRKDC-208ENST00000536710 SSR4P51571 173 aa3.67□□□□□ -1.82
PRKDC-208ENST00000536710 TDGF1P3P51864 188 aa3.67□□□□□ -1.82
PRKDC-208ENST00000536710 RPS21P63220 83 aaKnown RBP3.67□□□□□ -1.82
PRKDC-208ENST00000536710 CKAP4Q07065 602 aaKnown RBP3.67□□□□□ -1.82
PRKDC-208ENST00000536710 SOHLH1Q5JUK2 328 aa3.67□□□□□ -1.82
PRKDC-208ENST00000536710 LY6G6FQ5SQ64 297 aa3.67□□□□□ -1.82
PRKDC-208ENST00000536710 Q6ZSR3 168 aa3.67□□□□□ -1.82
PRKDC-208ENST00000536710 ZNF621Q6ZSS3 439 aa3.67□□□□□ -1.82
PRKDC-208ENST00000536710 BZW1Q7L1Q6 419 aaKnown RBP3.67□□□□□ -1.82
PRKDC-208ENST00000536710 NPBQ8NG41 125 aa3.67□□□□□ -1.82
PRKDC-208ENST00000536710 OR4C5Q8NGB2 326 aa3.67□□□□□ -1.82
PRKDC-208ENST00000536710 OR4A4PQ8NGN8 299 aa3.67□□□□□ -1.82
PRKDC-208ENST00000536710 IL22RA2Q969J5 263 aa3.67□□□□□ -1.82
PRKDC-208ENST00000536710 DNAJC19Q96DA6 116 aa3.67□□□□□ -1.82
PRKDC-208ENST00000536710 PKNOX2Q96KN3 472 aa3.67□□□□□ -1.82
PRKDC-208ENST00000536710 C11orf70Q9BRQ4 267 aa3.67□□□□□ -1.82
PRKDC-208ENST00000536710 OR51M1Q9H341 326 aa3.67□□□□□ -1.82
PRKDC-208ENST00000536710 RPF2Q9H7B2 306 aaKnown RBP3.67□□□□□ -1.82
PRKDC-208ENST00000536710 GEMIN7Q9H840 131 aaKnown RBP3.67□□□□□ -1.82
PRKDC-208ENST00000536710 CTPS2Q9NRF8 586 aa3.67□□□□□ -1.82
PRKDC-208ENST00000536710 SHPKQ9UHJ6 478 aa3.67□□□□□ -1.82
PRKDC-208ENST00000536710 ING4Q9UNL4 249 aa3.67□□□□□ -1.82
PRKDC-208ENST00000536710 RAI1Q7Z5J4 1906 aaPredicted RBP3.67□□□□□ -1.82
PRKDC-208ENST00000536710 IGKV6D-41A0A0C4DH26 115 aa3.66□□□□□ -1.82
PRKDC-208ENST00000536710 SERTM2A0A1B0GWG4 89 aa3.66□□□□□ -1.82
PRKDC-208ENST00000536710 PEX7O00628 323 aa3.66□□□□□ -1.82
PRKDC-208ENST00000536710 DUX4L4P0CJ87 422 aa3.66□□□□□ -1.82
PRKDC-208ENST00000536710 ANXA8P13928 327 aa3.66□□□□□ -1.82
PRKDC-208ENST00000536710 OTX1P32242 354 aaPredicted RBP3.66□□□□□ -1.82
PRKDC-208ENST00000536710 FOXN2P32314 431 aa3.66□□□□□ -1.82
PRKDC-208ENST00000536710 SERPINB5P36952 375 aa3.66□□□□□ -1.82
PRKDC-208ENST00000536710 RAB10P61026 200 aa3.66□□□□□ -1.82
PRKDC-208ENST00000536710 NUTF2P61970 127 aaKnown RBP3.66□□□□□ -1.82
PRKDC-208ENST00000536710 PRPSAP1Q14558 356 aa3.66□□□□□ -1.82
PRKDC-208ENST00000536710 CLINT1Q14677 625 aa3.66□□□□□ -1.82
PRKDC-208ENST00000536710 CHRNA6Q15825 494 aa3.66□□□□□ -1.82
PRKDC-208ENST00000536710 GUCA2BQ16661 112 aa3.66□□□□□ -1.82
PRKDC-208ENST00000536710 ANXA8L1Q5VT79 327 aa3.66□□□□□ -1.82
PRKDC-208ENST00000536710 REEP3Q6NUK4 255 aa3.66□□□□□ -1.82
PRKDC-208ENST00000536710 TMEM179Q6ZVK1 233 aa3.66□□□□□ -1.82
PRKDC-208ENST00000536710 FBXL13Q8NEE6 735 aa3.66□□□□□ -1.82
PRKDC-208ENST00000536710 TMEM158Q8WZ71 300 aa3.66□□□□□ -1.82
PRKDC-208ENST00000536710 PIK3IP1Q96FE7 263 aa3.66□□□□□ -1.82
PRKDC-208ENST00000536710 AURKBQ96GD4 344 aaPredicted RBP3.66□□□□□ -1.82
PRKDC-208ENST00000536710 P2RX4Q99571 388 aa3.66□□□□□ -1.82
PRKDC-208ENST00000536710 SH3GL3Q99963 347 aa3.66□□□□□ -1.82
PRKDC-208ENST00000536710 RACGAP1Q9H0H5 632 aa3.66□□□□□ -1.82
PRKDC-208ENST00000536710 EXO5Q9H790 373 aa3.66□□□□□ -1.82
PRKDC-208ENST00000536710 KCNJ16Q9NPI9 418 aa3.66□□□□□ -1.82
PRKDC-208ENST00000536710 ZNF816-ZNF321PA0A0X1KG74 233 aa3.65□□□□□ -1.83
PRKDC-208ENST00000536710 PRSS37A4D1T9 235 aa3.65□□□□□ -1.83
PRKDC-208ENST00000536710 HIDE1A8MVS5 230 aa3.65□□□□□ -1.83
PRKDC-208ENST00000536710 SLC1A1P43005 524 aa3.65□□□□□ -1.83
PRKDC-208ENST00000536710 ZNF133P52736 654 aaPredicted RBP3.65□□□□□ -1.83
PRKDC-208ENST00000536710 TWF1Q12792 350 aa3.65□□□□□ -1.83
PRKDC-208ENST00000536710 C22orf42Q6IC83 251 aa3.65□□□□□ -1.83
PRKDC-208ENST00000536710 LINC00173Q6ZV60 143 aa3.65□□□□□ -1.83
PRKDC-208ENST00000536710 CAMK2N1Q7Z7J9 78 aa3.65□□□□□ -1.83
PRKDC-208ENST00000536710 MREGQ8N565 214 aa3.65□□□□□ -1.83
PRKDC-208ENST00000536710 Q8N7P7 452 aa3.65□□□□□ -1.83
PRKDC-208ENST00000536710 OR51G1Q8NGK1 321 aa3.65□□□□□ -1.83
PRKDC-208ENST00000536710 BLOC1S5Q8TDH9 187 aa3.65□□□□□ -1.83
PRKDC-208ENST00000536710 RNF138Q8WVD3 245 aa3.65□□□□□ -1.83
PRKDC-208ENST00000536710 STARD8Q92502 1023 aa3.65□□□□□ -1.83
PRKDC-208ENST00000536710 OR5B12Q96R08 314 aa3.65□□□□□ -1.83
PRKDC-208ENST00000536710 TGS1Q96RS0 853 aaKnown RBP3.65□□□□□ -1.83
PRKDC-208ENST00000536710 BPIFA3Q9BQP9 254 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms