RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 AHCYP23526 432 aa10.79□□□□□ -0.68
PRKDC-207ENST00000536483 IFNA8P32881 189 aa10.79□□□□□ -0.68
PRKDC-207ENST00000536483 EFNA4P52798 201 aa10.79□□□□□ -0.68
PRKDC-207ENST00000536483 SRSF2Q01130 221 aaKnown RBP10.79□□□□□ -0.68
PRKDC-207ENST00000536483 NAAAQ02083 359 aa10.79□□□□□ -0.68
PRKDC-207ENST00000536483 CHRNB3Q05901 458 aa10.79□□□□□ -0.68
PRKDC-207ENST00000536483 RPL18Q07020 188 aaKnown RBP10.79□□□□□ -0.68
PRKDC-207ENST00000536483 SWI5Q1ZZU3 235 aa10.79□□□□□ -0.68
PRKDC-207ENST00000536483 MST1LQ2TV78 715 aa10.79□□□□□ -0.68
PRKDC-207ENST00000536483 IFI44LQ53G44 452 aa10.79□□□□□ -0.68
PRKDC-207ENST00000536483 LRFN4Q6PJG9 635 aa10.79□□□□□ -0.68
PRKDC-207ENST00000536483 HIST3H2AQ7L7L0 130 aa10.79□□□□□ -0.68
PRKDC-207ENST00000536483 PIWIL3Q7Z3Z3 882 aaKnown RBP10.79□□□□□ -0.68
PRKDC-207ENST00000536483 VTCN1Q7Z7D3 282 aa10.79□□□□□ -0.68
PRKDC-207ENST00000536483 NUP37Q8NFH4 326 aa10.79□□□□□ -0.68
PRKDC-207ENST00000536483 OR4F15Q8NGB8 312 aa10.79□□□□□ -0.68
PRKDC-207ENST00000536483 HIST1H2ACQ93077 130 aa10.79□□□□□ -0.68
PRKDC-207ENST00000536483 SGTBQ96EQ0 304 aa10.79□□□□□ -0.68
PRKDC-207ENST00000536483 TPD52L3Q96J77 140 aa10.79□□□□□ -0.68
PRKDC-207ENST00000536483 LRMDAQ9H2I8 198 aa10.79□□□□□ -0.68
PRKDC-207ENST00000536483 GORASP2Q9H8Y8 452 aa10.79□□□□□ -0.68
PRKDC-207ENST00000536483 C20orf141Q9NUB4 165 aa10.79□□□□□ -0.68
PRKDC-207ENST00000536483 GLTPQ9NZD2 209 aa10.79□□□□□ -0.68
PRKDC-207ENST00000536483 LPAR3Q9UBY5 353 aa10.79□□□□□ -0.68
PRKDC-207ENST00000536483 HIF3AQ9Y2N7 669 aa10.79□□□□□ -0.68
PRKDC-207ENST00000536483 MED31Q9Y3C7 131 aa10.79□□□□□ -0.68
PRKDC-207ENST00000536483 PMF1-BGLAPU3KQ54 211 aa10.79□□□□□ -0.68
PRKDC-207ENST00000536483 ANK2Q01484 3957 aa10.78□□□□□ -0.68
PRKDC-207ENST00000536483 MALRD1Q5VYJ5 2156 aa10.78□□□□□ -0.68
PRKDC-207ENST00000536483 A0A096LPE4 126 aa10.78□□□□□ -0.68
PRKDC-207ENST00000536483 A0A1W2PPZ6 126 aa10.78□□□□□ -0.68
PRKDC-207ENST00000536483 ZNF503-AS2A6NEH8 195 aa10.78□□□□□ -0.68
PRKDC-207ENST00000536483 ATP6V1G2-DDX39BF2Z307 99 aa10.78□□□□□ -0.68
PRKDC-207ENST00000536483 M0R3G1 203 aa10.78□□□□□ -0.68
PRKDC-207ENST00000536483 RNF13O43567 381 aa10.78□□□□□ -0.68
PRKDC-207ENST00000536483 LMX1BO60663 402 aa10.78□□□□□ -0.68
PRKDC-207ENST00000536483 BCL10O95999 233 aa10.78□□□□□ -0.68
PRKDC-207ENST00000536483 CRYAAP02489 173 aa10.78□□□□□ -0.68
PRKDC-207ENST00000536483 CSF3P09919 207 aa10.78□□□□□ -0.68
PRKDC-207ENST00000536483 CECR9P0C854 216 aa10.78□□□□□ -0.68
PRKDC-207ENST00000536483 HSD17B1P14061 328 aa10.78□□□□□ -0.68
PRKDC-207ENST00000536483 CALB2P22676 271 aa10.78□□□□□ -0.68
PRKDC-207ENST00000536483 CSNK1A1P48729 337 aa10.78□□□□□ -0.68
PRKDC-207ENST00000536483 MNAT1P51948 309 aa10.78□□□□□ -0.68
PRKDC-207ENST00000536483 BIDP55957 195 aa10.78□□□□□ -0.68
PRKDC-207ENST00000536483 LSM11P83369 360 aaKnown RBP eCLIP10.78□□□□□ -0.68
PRKDC-207ENST00000536483 IL1RL1Q01638 556 aa10.78□□□□□ -0.68
PRKDC-207ENST00000536483 PRKCDQ05655 676 aa10.78□□□□□ -0.68
PRKDC-207ENST00000536483 CAMK2DQ13557 499 aa10.78□□□□□ -0.68
PRKDC-207ENST00000536483 FHL1Q13642 323 aa10.78□□□□□ -0.68
PRKDC-207ENST00000536483 TAF11Q15544 211 aa10.78□□□□□ -0.68
PRKDC-207ENST00000536483 ARMC4Q5T2S8 1044 aa10.78□□□□□ -0.68
PRKDC-207ENST00000536483 HDDC2Q7Z4H3 204 aa10.78□□□□□ -0.68
PRKDC-207ENST00000536483 NANOGNBQ7Z5D8 188 aa10.78□□□□□ -0.68
PRKDC-207ENST00000536483 OR6N1Q8NGY5 312 aa10.78□□□□□ -0.68
PRKDC-207ENST00000536483 PFN4Q8NHR9 129 aa10.78□□□□□ -0.68
PRKDC-207ENST00000536483 ZNF566Q969W8 418 aa10.78□□□□□ -0.68
PRKDC-207ENST00000536483 NMD3Q96D46 503 aaKnown RBP10.78□□□□□ -0.68
PRKDC-207ENST00000536483 NSL1Q96IY1 281 aa10.78□□□□□ -0.68
PRKDC-207ENST00000536483 C7orf34Q96L11 122 aa10.78□□□□□ -0.68
PRKDC-207ENST00000536483 KCTD14Q9BQ13 255 aaPredicted RBP10.78□□□□□ -0.68
PRKDC-207ENST00000536483 ULBP2Q9BZM5 246 aa10.78□□□□□ -0.68
PRKDC-207ENST00000536483 MMADHCQ9H3L0 296 aaPredicted RBP10.78□□□□□ -0.68
PRKDC-207ENST00000536483 DCAF13Q9NV06 445 aaKnown RBP10.78□□□□□ -0.68
PRKDC-207ENST00000536483 ZNF224Q9NZL3 707 aa10.78□□□□□ -0.68
PRKDC-207ENST00000536483 STX18Q9P2W9 335 aaKnown RBP10.78□□□□□ -0.68
PRKDC-207ENST00000536483 CD300AQ9UGN4 299 aa10.78□□□□□ -0.68
PRKDC-207ENST00000536483 RPS6KA6Q9UK32 745 aa10.78□□□□□ -0.68
PRKDC-207ENST00000536483 FBXO9Q9UK97 447 aaPredicted RBP10.78□□□□□ -0.68
PRKDC-207ENST00000536483 MOKQ9UQ07 419 aa10.78□□□□□ -0.68
PRKDC-207ENST00000536483 SNX13Q9Y5W8 968 aa10.78□□□□□ -0.68
PRKDC-207ENST00000536483 A0A1W2PRQ8 180 aa10.77□□□□□ -0.69
PRKDC-207ENST00000536483 C11orf98E9PRG8 122 aa10.77□□□□□ -0.69
PRKDC-207ENST00000536483 BLOC1S5-TXNDC5H3BN57 136 aa10.77□□□□□ -0.69
PRKDC-207ENST00000536483 KPNA4O00629 521 aaPredicted RBP10.77□□□□□ -0.69
PRKDC-207ENST00000536483 GSTA4O15217 222 aa10.77□□□□□ -0.69
PRKDC-207ENST00000536483 ENTPD5O75356 428 aa10.77□□□□□ -0.69
PRKDC-207ENST00000536483 SERPINA1P01009 418 aa10.77□□□□□ -0.69
PRKDC-207ENST00000536483 IGHMP01871 453 aa10.77□□□□□ -0.69
PRKDC-207ENST00000536483 FUT4P22083 530 aa10.77□□□□□ -0.69
PRKDC-207ENST00000536483 IGFBP5P24593 272 aa10.77□□□□□ -0.69
PRKDC-207ENST00000536483 HGFACQ04756 655 aa10.77□□□□□ -0.69
PRKDC-207ENST00000536483 DGCR6Q14129 220 aa10.77□□□□□ -0.69
PRKDC-207ENST00000536483 GGTLC2Q14390 218 aa10.77□□□□□ -0.69
PRKDC-207ENST00000536483 TRAM2Q15035 370 aa10.77□□□□□ -0.69
PRKDC-207ENST00000536483 EFNB3Q15768 340 aa10.77□□□□□ -0.69
PRKDC-207ENST00000536483 IQCCQ4KMZ1 466 aa10.77□□□□□ -0.69
PRKDC-207ENST00000536483 C10orf128Q5T292 105 aa10.77□□□□□ -0.69
PRKDC-207ENST00000536483 IL17RELQ6ZVW7 336 aa10.77□□□□□ -0.69
PRKDC-207ENST00000536483 TMPRSS11FQ6ZWK6 438 aa10.77□□□□□ -0.69
PRKDC-207ENST00000536483 DPPA2Q7Z7J5 298 aa10.77□□□□□ -0.69
PRKDC-207ENST00000536483 PGAM4Q8N0Y7 254 aa10.77□□□□□ -0.69
PRKDC-207ENST00000536483 ARHGAP24Q8N264 748 aa10.77□□□□□ -0.69
PRKDC-207ENST00000536483 LRRC75AQ8NAA5 344 aa10.77□□□□□ -0.69
PRKDC-207ENST00000536483 ASB10Q8WXI3 467 aa10.77□□□□□ -0.69
PRKDC-207ENST00000536483 ACOT11Q8WXI4 607 aaPredicted RBP10.77□□□□□ -0.69
PRKDC-207ENST00000536483 BPIFA2Q96DR5 249 aa10.77□□□□□ -0.69
PRKDC-207ENST00000536483 FBXO17Q96EF6 278 aa10.77□□□□□ -0.69
PRKDC-207ENST00000536483 HSH2DQ96JZ2 352 aa10.77□□□□□ -0.69
PRKDC-207ENST00000536483 FOXB1Q99853 325 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms