RNA–Protein interactions for RNA: ENST00000535927.5

VAMP1-205, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-205ENST00000535927 ZNHIT1O43257 154 aa14.37□□□□□ -0.11
VAMP1-205ENST00000535927 DENRO43583 198 aaKnown RBP14.37□□□□□ -0.11
VAMP1-205ENST00000535927 SERPINI2O75830 405 aa14.37□□□□□ -0.11
VAMP1-205ENST00000535927 PRR23D2P0DMB1 279 aaPredicted RBP14.37□□□□□ -0.11
VAMP1-205ENST00000535927 EPHA2P29317 976 aa14.37□□□□□ -0.11
VAMP1-205ENST00000535927 CDKN2AP42771 156 aaKnown RBP14.37□□□□□ -0.11
VAMP1-205ENST00000535927 SH3BGRP55822 239 aaPredicted RBP14.37□□□□□ -0.11
VAMP1-205ENST00000535927 TGFBR3Q03167 851 aa14.37□□□□□ -0.11
VAMP1-205ENST00000535927 TOP3AQ13472 1001 aaPredicted RBP14.37□□□□□ -0.11
VAMP1-205ENST00000535927 CAMK2DQ13557 499 aa14.37□□□□□ -0.11
VAMP1-205ENST00000535927 P2RY6Q15077 328 aa14.37□□□□□ -0.11
VAMP1-205ENST00000535927 OCLNQ16625 522 aa14.37□□□□□ -0.11
VAMP1-205ENST00000535927 SLC25A35Q3KQZ1 300 aa14.37□□□□□ -0.11
VAMP1-205ENST00000535927 MESTQ5EB52 335 aa14.37□□□□□ -0.11
VAMP1-205ENST00000535927 SLC35D3Q5M8T2 416 aa14.37□□□□□ -0.11
VAMP1-205ENST00000535927 C10orf128Q5T292 105 aa14.37□□□□□ -0.11
VAMP1-205ENST00000535927 ZNF691Q5VV52 312 aa14.37□□□□□ -0.11
VAMP1-205ENST00000535927 PTCHD4Q6ZW05 846 aa14.37□□□□□ -0.11
VAMP1-205ENST00000535927 MRGPRGQ86SM5 289 aa14.37□□□□□ -0.11
VAMP1-205ENST00000535927 NOXO1Q8NFA2 376 aa14.37□□□□□ -0.11
VAMP1-205ENST00000535927 OR4K13Q8NH42 304 aa14.37□□□□□ -0.11
VAMP1-205ENST00000535927 RHOXF1Q8NHV9 184 aa14.37□□□□□ -0.11
VAMP1-205ENST00000535927 TMEM163Q8TC26 289 aa14.37□□□□□ -0.11
VAMP1-205ENST00000535927 STARD4Q96DR4 205 aa14.37□□□□□ -0.11
VAMP1-205ENST00000535927 LRRC46Q96FV0 321 aa14.37□□□□□ -0.11
VAMP1-205ENST00000535927 BOD1Q96IK1 185 aa14.37□□□□□ -0.11
VAMP1-205ENST00000535927 HDHD5Q9BXW7 423 aa14.37□□□□□ -0.11
VAMP1-205ENST00000535927 ANKRD60Q9BZ19 345 aa14.37□□□□□ -0.11
VAMP1-205ENST00000535927 UPB1Q9UBR1 384 aa14.37□□□□□ -0.11
VAMP1-205ENST00000535927 MALT1Q9UDY8 824 aa14.37□□□□□ -0.11
VAMP1-205ENST00000535927 ERRFI1Q9UJM3 462 aaPredicted RBP14.37□□□□□ -0.11
VAMP1-205ENST00000535927 LRRC42Q9Y546 428 aa14.37□□□□□ -0.11
VAMP1-205ENST00000535927 SH3D21A4FU49 640 aa14.36□□□□□ -0.11
VAMP1-205ENST00000535927 KDM4EB2RXH2 506 aaPredicted RBP14.36□□□□□ -0.11
VAMP1-205ENST00000535927 PRODHO43272 600 aa14.36□□□□□ -0.11
VAMP1-205ENST00000535927 KHDRBS3O75525 346 aaKnown RBP14.36□□□□□ -0.11
VAMP1-205ENST00000535927 KRT33AO76009 404 aa14.36□□□□□ -0.11
VAMP1-205ENST00000535927 CGAP01215 116 aa14.36□□□□□ -0.11
VAMP1-205ENST00000535927 HOXB1P14653 301 aaPredicted RBP14.36□□□□□ -0.11
VAMP1-205ENST00000535927 CHRNB4P30926 498 aa14.36□□□□□ -0.11
VAMP1-205ENST00000535927 SELENOPP49908 381 aa14.36□□□□□ -0.11
VAMP1-205ENST00000535927 ZNF84P51523 738 aa14.36□□□□□ -0.11
VAMP1-205ENST00000535927 MRPL49Q13405 166 aaKnown RBP14.36□□□□□ -0.11
VAMP1-205ENST00000535927 SLC35F1Q5T1Q4 408 aa14.36□□□□□ -0.11
VAMP1-205ENST00000535927 NXNL2Q5VZ03 156 aa14.36□□□□□ -0.11
VAMP1-205ENST00000535927 TMEM236Q5W0B7 351 aa14.36□□□□□ -0.11
VAMP1-205ENST00000535927 LEG1Q6P5S2 330 aa14.36□□□□□ -0.11
VAMP1-205ENST00000535927 XKRXQ6PP77 449 aa14.36□□□□□ -0.11
VAMP1-205ENST00000535927 Q6ZT83 130 aa14.36□□□□□ -0.11
VAMP1-205ENST00000535927 THAP5Q7Z6K1 395 aa14.36□□□□□ -0.11
VAMP1-205ENST00000535927 ZBTB46Q86UZ6 589 aa14.36□□□□□ -0.11
VAMP1-205ENST00000535927 GID4Q8IVV7 300 aa14.36□□□□□ -0.11
VAMP1-205ENST00000535927 CCDC36Q8IYA8 594 aa14.36□□□□□ -0.11
VAMP1-205ENST00000535927 IQCF1Q8N6M8 205 aa14.36□□□□□ -0.11
VAMP1-205ENST00000535927 CNEP1R1Q8N9A8 125 aa14.36□□□□□ -0.11
VAMP1-205ENST00000535927 SLC37A3Q8NCC5 494 aa14.36□□□□□ -0.11
VAMP1-205ENST00000535927 FAM81AQ8TBF8 368 aa14.36□□□□□ -0.11
VAMP1-205ENST00000535927 HDAC2Q92769 488 aaKnown RBP14.36□□□□□ -0.11
VAMP1-205ENST00000535927 RASD2Q96D21 266 aa14.36□□□□□ -0.11
VAMP1-205ENST00000535927 NMD3Q96D46 503 aaKnown RBP14.36□□□□□ -0.11
VAMP1-205ENST00000535927 EMC6Q9BV81 110 aa14.36□□□□□ -0.11
VAMP1-205ENST00000535927 NMNAT2Q9BZQ4 307 aa14.36□□□□□ -0.11
VAMP1-205ENST00000535927 RACGAP1Q9H0H5 632 aa14.36□□□□□ -0.11
VAMP1-205ENST00000535927 CLN6Q9NWW5 311 aa14.36□□□□□ -0.11
VAMP1-205ENST00000535927 ELOVL5Q9NYP7 299 aa14.36□□□□□ -0.11
VAMP1-205ENST00000535927 SLC5A6Q9Y289 635 aa14.36□□□□□ -0.11
VAMP1-205ENST00000535927 COL12A1Q99715 3063 aa14.36□□□□□ -0.11
VAMP1-205ENST00000535927 PCNX1Q96RV3 2341 aa14.36□□□□□ -0.11
VAMP1-205ENST00000535927 FREM1Q5H8C1 2179 aa14.35□□□□□ -0.11
VAMP1-205ENST00000535927 A0A0G2JNJ9 132 aa14.35□□□□□ -0.11
VAMP1-205ENST00000535927 ZNF587BE7ETH6 402 aa14.35□□□□□ -0.11
VAMP1-205ENST00000535927 TLX2O43763 284 aaPredicted RBP14.35□□□□□ -0.11
VAMP1-205ENST00000535927 NPR2P20594 1047 aa14.35□□□□□ -0.11
VAMP1-205ENST00000535927 GNLYP22749 145 aa14.35□□□□□ -0.11
VAMP1-205ENST00000535927 MYF6P23409 242 aa14.35□□□□□ -0.11
VAMP1-205ENST00000535927 ISL1P61371 349 aa14.35□□□□□ -0.11
VAMP1-205ENST00000535927 GLO1Q04760 184 aa14.35□□□□□ -0.11
VAMP1-205ENST00000535927 SRSF1Q07955 248 aaKnown RBP eCLIP14.35□□□□□ -0.11
VAMP1-205ENST00000535927 CD47Q08722 323 aa14.35□□□□□ -0.11
VAMP1-205ENST00000535927 MELKQ14680 651 aa14.35□□□□□ -0.11
VAMP1-205ENST00000535927 TFAP2EQ6VUC0 442 aa14.35□□□□□ -0.11
VAMP1-205ENST00000535927 ZNF627Q7L945 461 aa14.35□□□□□ -0.11
VAMP1-205ENST00000535927 NUFIP2Q7Z417 695 aaKnown RBP14.35□□□□□ -0.11
VAMP1-205ENST00000535927 DPPA2Q7Z7J5 298 aa14.35□□□□□ -0.11
VAMP1-205ENST00000535927 GCNT2Q8N0V5 402 aa14.35□□□□□ -0.11
VAMP1-205ENST00000535927 MARVELD2Q8N4S9 558 aa14.35□□□□□ -0.11
VAMP1-205ENST00000535927 TCEANCQ8N8B7 351 aa14.35□□□□□ -0.11
VAMP1-205ENST00000535927 PRR7Q8TB68 274 aa14.35□□□□□ -0.11
VAMP1-205ENST00000535927 NMNAT3Q96T66 252 aa14.35□□□□□ -0.11
VAMP1-205ENST00000535927 ULBP2Q9BZM5 246 aa14.35□□□□□ -0.11
VAMP1-205ENST00000535927 OR10A4Q9H209 315 aa14.35□□□□□ -0.11
VAMP1-205ENST00000535927 HAO2Q9NYQ3 351 aa14.35□□□□□ -0.11
VAMP1-205ENST00000535927 JKAMPQ9P055 326 aa14.35□□□□□ -0.11
VAMP1-205ENST00000535927 Q9UFV3 132 aa14.35□□□□□ -0.11
VAMP1-205ENST00000535927 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.35□□□□□ -0.11
VAMP1-205ENST00000535927 CLEC4AQ9UMR7 237 aa14.35□□□□□ -0.11
VAMP1-205ENST00000535927 SPTAN1Q13813 2472 aaKnown RBP14.35□□□□□ -0.11
VAMP1-205ENST00000535927 NCOA6Q14686 2063 aaPredicted RBP14.34□□□□□ -0.11
VAMP1-205ENST00000535927 SLC22A31A6NKX4 558 aa14.34□□□□□ -0.11
VAMP1-205ENST00000535927 LRRTM2O43300 516 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms