RNA–Protein interactions for RNA: ENST00000535659.6

CNN1-202, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-202ENST00000535659 SURF4O15260 269 aa13.74□□□□□ -0.21
CNN1-202ENST00000535659 EEF1E1O43324 174 aaKnown RBP13.74□□□□□ -0.21
CNN1-202ENST00000535659 SLC2A10O95528 541 aa13.74□□□□□ -0.21
CNN1-202ENST00000535659 QDPRP09417 244 aa13.74□□□□□ -0.21
CNN1-202ENST00000535659 NR2C1P13056 603 aa13.74□□□□□ -0.21
CNN1-202ENST00000535659 FAPQ12884 760 aa13.74□□□□□ -0.21
CNN1-202ENST00000535659 SNCBQ16143 134 aa13.74□□□□□ -0.21
CNN1-202ENST00000535659 SNAPC1Q16533 368 aa13.74□□□□□ -0.21
CNN1-202ENST00000535659 SLC25A35Q3KQZ1 300 aa13.74□□□□□ -0.21
CNN1-202ENST00000535659 C12orf73Q69YU5 71 aa13.74□□□□□ -0.21
CNN1-202ENST00000535659 LEG1Q6P5S2 330 aa13.74□□□□□ -0.21
CNN1-202ENST00000535659 ZNF474Q6S9Z5 364 aaPredicted RBP13.74□□□□□ -0.21
CNN1-202ENST00000535659 ZNF808Q8N4W9 903 aaPredicted RBP13.74□□□□□ -0.21
CNN1-202ENST00000535659 NPEPL1Q8NDH3 523 aa13.74□□□□□ -0.21
CNN1-202ENST00000535659 ZNF555Q8NEP9 628 aa13.74□□□□□ -0.21
CNN1-202ENST00000535659 NOXO1Q8NFA2 376 aa13.74□□□□□ -0.21
CNN1-202ENST00000535659 ITLN2Q8WWU7 325 aaPredicted RBP13.74□□□□□ -0.21
CNN1-202ENST00000535659 MCHR2Q969V1 340 aa13.74□□□□□ -0.21
CNN1-202ENST00000535659 NMD3Q96D46 503 aaKnown RBP13.74□□□□□ -0.21
CNN1-202ENST00000535659 SLC38A2Q96QD8 506 aa13.74□□□□□ -0.21
CNN1-202ENST00000535659 SNX18Q96RF0 628 aa13.74□□□□□ -0.21
CNN1-202ENST00000535659 GPR35Q9HC97 309 aa13.74□□□□□ -0.21
CNN1-202ENST00000535659 HIVEP3Q5T1R4 2406 aa13.74□□□□□ -0.21
CNN1-202ENST00000535659 UBR5O95071 2799 aaPredicted RBP13.74□□□□□ -0.21
CNN1-202ENST00000535659 OR6C68A6NDL8 312 aa13.74□□□□□ -0.21
CNN1-202ENST00000535659 WIPF3A6NGB9 483 aa13.74□□□□□ -0.21
CNN1-202ENST00000535659 RIIAD1A6NNX1 92 aa13.74□□□□□ -0.21
CNN1-202ENST00000535659 RPL36A-HNRNPH2H7BZ11 118 aa13.74□□□□□ -0.21
CNN1-202ENST00000535659 H7C1C5 153 aa13.74□□□□□ -0.21
CNN1-202ENST00000535659 SLC16A6O15403 523 aa13.74□□□□□ -0.21
CNN1-202ENST00000535659 RENP00797 406 aa13.74□□□□□ -0.21
CNN1-202ENST00000535659 VHLP40337 213 aa13.74□□□□□ -0.21
CNN1-202ENST00000535659 LCN6P62502 163 aa13.74□□□□□ -0.21
CNN1-202ENST00000535659 CD47Q08722 323 aa13.74□□□□□ -0.21
CNN1-202ENST00000535659 ITGADQ13349 1161 aa13.74□□□□□ -0.21
CNN1-202ENST00000535659 ABHD12BQ7Z5M8 362 aaPredicted RBP13.74□□□□□ -0.21
CNN1-202ENST00000535659 GABRG1Q8N1C3 465 aa13.74□□□□□ -0.21
CNN1-202ENST00000535659 DHRSXQ8N5I4 330 aa13.74□□□□□ -0.21
CNN1-202ENST00000535659 SLC37A3Q8NCC5 494 aa13.74□□□□□ -0.21
CNN1-202ENST00000535659 SDR9C7Q8NEX9 313 aa13.74□□□□□ -0.21
CNN1-202ENST00000535659 PLEKHA8Q96JA3 519 aa13.74□□□□□ -0.21
CNN1-202ENST00000535659 PRRG3Q9BZD7 231 aa13.74□□□□□ -0.21
CNN1-202ENST00000535659 ULBP2Q9BZM5 246 aa13.74□□□□□ -0.21
CNN1-202ENST00000535659 CRLF2Q9HC73 371 aa13.74□□□□□ -0.21
CNN1-202ENST00000535659 KCNJ16Q9NPI9 418 aa13.74□□□□□ -0.21
CNN1-202ENST00000535659 MALT1Q9UDY8 824 aa13.74□□□□□ -0.21
CNN1-202ENST00000535659 NDRG4Q9ULP0 352 aaKnown RBP13.74□□□□□ -0.21
CNN1-202ENST00000535659 ZNF587BE7ETH6 402 aa13.73□□□□□ -0.21
CNN1-202ENST00000535659 AGFG2O95081 481 aa13.73□□□□□ -0.21
CNN1-202ENST00000535659 ZNF3P17036 446 aa13.73□□□□□ -0.21
CNN1-202ENST00000535659 GGT2P36268 569 aa13.73□□□□□ -0.21
CNN1-202ENST00000535659 ZNF133P52736 654 aaPredicted RBP13.73□□□□□ -0.21
CNN1-202ENST00000535659 CDC42P60953 191 aa13.73□□□□□ -0.21
CNN1-202ENST00000535659 EFNB1P98172 346 aa13.73□□□□□ -0.21
CNN1-202ENST00000535659 ROR2Q01974 943 aaKnown RBP13.73□□□□□ -0.21
CNN1-202ENST00000535659 P2RY6Q15077 328 aa13.73□□□□□ -0.21
CNN1-202ENST00000535659 CDSNQ15517 529 aa13.73□□□□□ -0.21
CNN1-202ENST00000535659 TTC23Q5W5X9 447 aa13.73□□□□□ -0.21
CNN1-202ENST00000535659 SLC25A47Q6Q0C1 308 aa13.73□□□□□ -0.21
CNN1-202ENST00000535659 LINGO2Q7L985 606 aa13.73□□□□□ -0.21
CNN1-202ENST00000535659 CYB561A3Q8NBI2 242 aa13.73□□□□□ -0.21
CNN1-202ENST00000535659 NUAK2Q9H093 628 aa13.73□□□□□ -0.21
CNN1-202ENST00000535659 SYT4Q9H2B2 425 aa13.73□□□□□ -0.21
CNN1-202ENST00000535659 SRA1Q9HD15 236 aaKnown RBP13.73□□□□□ -0.21
CNN1-202ENST00000535659 ELOVL5Q9NYP7 299 aa13.73□□□□□ -0.21
CNN1-202ENST00000535659 GMPPBQ9Y5P6 360 aa13.73□□□□□ -0.21
CNN1-202ENST00000535659 INTS1Q8N201 2190 aaKnown RBP13.73□□□□□ -0.21
CNN1-202ENST00000535659 PCNX1Q96RV3 2341 aa13.72□□□□□ -0.21
CNN1-202ENST00000535659 DHHO43323 396 aa13.72□□□□□ -0.21
CNN1-202ENST00000535659 CLDN14O95500 239 aa13.72□□□□□ -0.21
CNN1-202ENST00000535659 MPGP29372 298 aa13.72□□□□□ -0.21
CNN1-202ENST00000535659 CRABP1P29762 137 aa13.72□□□□□ -0.21
CNN1-202ENST00000535659 PCYT1AP49585 367 aa13.72□□□□□ -0.21
CNN1-202ENST00000535659 AQP4P55087 323 aa13.72□□□□□ -0.21
CNN1-202ENST00000535659 ADARB1P78563 741 aaKnown RBP13.72□□□□□ -0.21
CNN1-202ENST00000535659 SRSF1Q07955 248 aaKnown RBP eCLIP13.72□□□□□ -0.21
CNN1-202ENST00000535659 CRMP1Q14194 572 aa13.72□□□□□ -0.21
CNN1-202ENST00000535659 CEACAM16Q2WEN9 425 aa13.72□□□□□ -0.21
CNN1-202ENST00000535659 TRUB1Q8WWH5 349 aaKnown RBP13.72□□□□□ -0.21
CNN1-202ENST00000535659 CYGBQ8WWM9 190 aa13.72□□□□□ -0.21
CNN1-202ENST00000535659 PTP4A1Q93096 173 aa13.72□□□□□ -0.21
CNN1-202ENST00000535659 ZNF837Q96EG3 531 aaPredicted RBP13.72□□□□□ -0.21
CNN1-202ENST00000535659 ALKBH3Q96Q83 286 aaPredicted RBP13.72□□□□□ -0.21
CNN1-202ENST00000535659 PITX2Q99697 317 aa13.72□□□□□ -0.21
CNN1-202ENST00000535659 RBM24Q9BX46 236 aaKnown RBP13.72□□□□□ -0.21
CNN1-202ENST00000535659 RPRD1BQ9NQG5 326 aaKnown RBP13.72□□□□□ -0.21
CNN1-202ENST00000535659 B9D1Q9UPM9 204 aa13.72□□□□□ -0.21
CNN1-202ENST00000535659 FLNCQ14315 2725 aa13.72□□□□□ -0.21
CNN1-202ENST00000535659 IGKV1D-43A0A0B4J1Z2 117 aa13.71□□□□□ -0.21
CNN1-202ENST00000535659 FAM90A27PA6NNH2 459 aa13.71□□□□□ -0.21
CNN1-202ENST00000535659 H0YAE9 185 aa13.71□□□□□ -0.21
CNN1-202ENST00000535659 TLX2O43763 284 aaPredicted RBP13.71□□□□□ -0.21
CNN1-202ENST00000535659 PRKYO43930 277 aa13.71□□□□□ -0.21
CNN1-202ENST00000535659 SLC16A7O60669 478 aa13.71□□□□□ -0.21
CNN1-202ENST00000535659 IGHV1-2P23083 117 aa13.71□□□□□ -0.21
CNN1-202ENST00000535659 ASCL1P50553 236 aa13.71□□□□□ -0.21
CNN1-202ENST00000535659 FOXG1P55316 489 aaPredicted RBP13.71□□□□□ -0.21
CNN1-202ENST00000535659 FMODQ06828 376 aa13.71□□□□□ -0.21
CNN1-202ENST00000535659 KEAP1Q14145 624 aa13.71□□□□□ -0.21
CNN1-202ENST00000535659 STK11Q15831 433 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 120.1 ms