RNA–Protein interactions for RNA: ENST00000534382.5

CTSB-231, Transcript of cathepsin B, human

TSL 4

Gene CTSB, Length 764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSB-231	ENST00000534382	IGFN1	Q86VF2	1251 aa		12.64	□□□□□ -0.39
CTSB-231	ENST00000534382	SYT14	Q8NB59	555 aa		12.64	□□□□□ -0.39
CTSB-231	ENST00000534382	HDAC2	Q92769	488 aa	Known RBP	12.64	□□□□□ -0.39
CTSB-231	ENST00000534382	MCHR2	Q969V1	340 aa		12.64	□□□□□ -0.39
CTSB-231	ENST00000534382	ASB9	Q96DX5	294 aa		12.64	□□□□□ -0.39
CTSB-231	ENST00000534382	DHRS9	Q9BPW9	319 aa		12.64	□□□□□ -0.39
CTSB-231	ENST00000534382	KCNS3	Q9BQ31	491 aa		12.64	□□□□□ -0.39
CTSB-231	ENST00000534382	KATNB1	Q9BVA0	655 aa		12.64	□□□□□ -0.39
CTSB-231	ENST00000534382	GSX2	Q9BZM3	304 aa		12.64	□□□□□ -0.39
CTSB-231	ENST00000534382	KRCC1	Q9NPI7	259 aa	Predicted RBP	12.64	□□□□□ -0.39
CTSB-231	ENST00000534382	ZNF701	Q9NV72	531 aa	Predicted RBP	12.64	□□□□□ -0.39
CTSB-231	ENST00000534382	FAIM	Q9NVQ4	179 aa		12.64	□□□□□ -0.39
CTSB-231	ENST00000534382	B3GNT2	Q9NY97	397 aa		12.64	□□□□□ -0.39
CTSB-231	ENST00000534382	ZNF346	Q9UL40	294 aa	Known RBP	12.64	□□□□□ -0.39
CTSB-231	ENST00000534382	ATP23	Q9Y6H3	246 aa		12.64	□□□□□ -0.39
CTSB-231	ENST00000534382	F8	P00451	2351 aa		12.64	□□□□□ -0.39
CTSB-231	ENST00000534382	HEATR1	Q9H583	2144 aa	Known RBP	12.64	□□□□□ -0.39
CTSB-231	ENST00000534382	ATP6V1G2-DDX39B	F2Z307	99 aa		12.63	□□□□□ -0.39
CTSB-231	ENST00000534382	OVOL3	O00110	214 aa		12.63	□□□□□ -0.39
CTSB-231	ENST00000534382	GYG2	O15488	501 aa		12.63	□□□□□ -0.39
CTSB-231	ENST00000534382	ARHGEF9	O43307	516 aa		12.63	□□□□□ -0.39
CTSB-231	ENST00000534382	PTP4A3	O75365	173 aa		12.63	□□□□□ -0.39
CTSB-231	ENST00000534382	HLA-H	P01893	362 aa		12.63	□□□□□ -0.39
CTSB-231	ENST00000534382	CRYAA	P02489	173 aa		12.63	□□□□□ -0.39
CTSB-231	ENST00000534382	CECR9	P0C854	216 aa		12.63	□□□□□ -0.39
CTSB-231	ENST00000534382	OR8G3P	P0DMU2	310 aa		12.63	□□□□□ -0.39
CTSB-231	ENST00000534382	CD79A	P11912	226 aa		12.63	□□□□□ -0.39
CTSB-231	ENST00000534382	PAX1	P15863	534 aa		12.63	□□□□□ -0.39
CTSB-231	ENST00000534382	RRM2	P31350	389 aa		12.63	□□□□□ -0.39
CTSB-231	ENST00000534382	PTH2R	P49190	550 aa		12.63	□□□□□ -0.39
CTSB-231	ENST00000534382	ZNF84	P51523	738 aa		12.63	□□□□□ -0.39
CTSB-231	ENST00000534382	ZNF133	P52736	654 aa	Predicted RBP	12.63	□□□□□ -0.39
CTSB-231	ENST00000534382	NAAA	Q02083	359 aa		12.63	□□□□□ -0.39
CTSB-231	ENST00000534382	GSG1	Q2KHT4	349 aa		12.63	□□□□□ -0.39
CTSB-231	ENST00000534382	FAM205BP	Q63HN1	556 aa		12.63	□□□□□ -0.39
CTSB-231	ENST00000534382	B3GLCT	Q6Y288	498 aa		12.63	□□□□□ -0.39
CTSB-231	ENST00000534382	DTX2	Q86UW9	622 aa		12.63	□□□□□ -0.39
CTSB-231	ENST00000534382	TGIF2LY	Q8IUE0	185 aa		12.63	□□□□□ -0.39
CTSB-231	ENST00000534382	SLC22A24	Q8N4F4	322 aa		12.63	□□□□□ -0.39
CTSB-231	ENST00000534382	NANOS1	Q8WY41	292 aa	Known RBP	12.63	□□□□□ -0.39
CTSB-231	ENST00000534382	POP5	Q969H6	163 aa	Known RBP	12.63	□□□□□ -0.39
CTSB-231	ENST00000534382	PERP	Q96FX8	193 aa		12.63	□□□□□ -0.39
CTSB-231	ENST00000534382	CLPTM1L	Q96KA5	538 aa		12.63	□□□□□ -0.39
CTSB-231	ENST00000534382	KCNK17	Q96T54	332 aa		12.63	□□□□□ -0.39
CTSB-231	ENST00000534382	GRIP2	Q9C0E4	1043 aa		12.63	□□□□□ -0.39
CTSB-231	ENST00000534382	NDEL1	Q9GZM8	345 aa		12.63	□□□□□ -0.39
CTSB-231	ENST00000534382	DENND2D	Q9H6A0	471 aa	Predicted RBP	12.63	□□□□□ -0.39
CTSB-231	ENST00000534382	TMEM38B	Q9NVV0	291 aa		12.63	□□□□□ -0.39
CTSB-231	ENST00000534382	AURKC	Q9UQB9	309 aa		12.63	□□□□□ -0.39
CTSB-231	ENST00000534382	SIGLEC7	Q9Y286	467 aa		12.63	□□□□□ -0.39
CTSB-231	ENST00000534382	PLCE1	Q9P212	2302 aa		12.63	□□□□□ -0.39
CTSB-231	ENST00000534382	USF3	Q68DE3	2245 aa		12.62	□□□□□ -0.39
CTSB-231	ENST00000534382	ACOT8	O14734	319 aa		12.62	□□□□□ -0.39
CTSB-231	ENST00000534382	STAMBP	O95630	424 aa		12.62	□□□□□ -0.39
CTSB-231	ENST00000534382	CD8A	P01732	235 aa		12.62	□□□□□ -0.39
CTSB-231	ENST00000534382	CD14	P08571	375 aa		12.62	□□□□□ -0.39
CTSB-231	ENST00000534382	NR2C1	P13056	603 aa		12.62	□□□□□ -0.39
CTSB-231	ENST00000534382	ZNF26	P17031	533 aa	Predicted RBP	12.62	□□□□□ -0.39
CTSB-231	ENST00000534382	TTK	P33981	857 aa		12.62	□□□□□ -0.39
CTSB-231	ENST00000534382	RPL4	P36578	427 aa	Known RBP	12.62	□□□□□ -0.39
CTSB-231	ENST00000534382	ACVR1B	P36896	505 aa		12.62	□□□□□ -0.39
CTSB-231	ENST00000534382	FABP6	P51161	128 aa		12.62	□□□□□ -0.39
CTSB-231	ENST00000534382	IDH3G	P51553	393 aa	Predicted RBP	12.62	□□□□□ -0.39
CTSB-231	ENST00000534382	ERVK-25	P63136	954 aa		12.62	□□□□□ -0.39
CTSB-231	ENST00000534382	PIGF	Q07326	219 aa		12.62	□□□□□ -0.39
CTSB-231	ENST00000534382	CD47	Q08722	323 aa		12.62	□□□□□ -0.39
CTSB-231	ENST00000534382	TRAP1	Q12931	704 aa	Known RBP	12.62	□□□□□ -0.39
CTSB-231	ENST00000534382	NPRL3	Q12980	569 aa		12.62	□□□□□ -0.39
CTSB-231	ENST00000534382	NRN1L	Q496H8	165 aa		12.62	□□□□□ -0.39
CTSB-231	ENST00000534382	DNAL1	Q4LDG9	190 aa		12.62	□□□□□ -0.39
CTSB-231	ENST00000534382	C10orf128	Q5T292	105 aa		12.62	□□□□□ -0.39
CTSB-231	ENST00000534382	AGAP6	Q5VW22	663 aa		12.62	□□□□□ -0.39
CTSB-231	ENST00000534382	ZNF544	Q6NX49	715 aa		12.62	□□□□□ -0.39
CTSB-231	ENST00000534382	PRSS57	Q6UWY2	283 aa		12.62	□□□□□ -0.39
CTSB-231	ENST00000534382	KRTAP1-3	Q8IUG1	177 aa		12.62	□□□□□ -0.39
CTSB-231	ENST00000534382	SKA3	Q8IX90	412 aa		12.62	□□□□□ -0.39
CTSB-231	ENST00000534382	FBXL14	Q8N1E6	418 aa		12.62	□□□□□ -0.39
CTSB-231	ENST00000534382	ARIH2OS	Q8N7S6	290 aa		12.62	□□□□□ -0.39
CTSB-231	ENST00000534382	ZNF519	Q8TB69	540 aa		12.62	□□□□□ -0.39
CTSB-231	ENST00000534382	FNDC8	Q8TC99	324 aa		12.62	□□□□□ -0.39
CTSB-231	ENST00000534382	CCDC124	Q96CT7	223 aa	Known RBP	12.62	□□□□□ -0.39
CTSB-231	ENST00000534382	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	12.62	□□□□□ -0.39
CTSB-231	ENST00000534382	NMD3	Q96D46	503 aa	Known RBP	12.62	□□□□□ -0.39
CTSB-231	ENST00000534382	LRGUK	Q96M69	825 aa		12.62	□□□□□ -0.39
CTSB-231	ENST00000534382	TSPAN32	Q96QS1	320 aa		12.62	□□□□□ -0.39
CTSB-231	ENST00000534382	TRAF4	Q9BUZ4	470 aa	Predicted RBP	12.62	□□□□□ -0.39
CTSB-231	ENST00000534382	ALG12	Q9BV10	488 aa		12.62	□□□□□ -0.39
CTSB-231	ENST00000534382	MAGIX	Q9H6Y5	334 aa		12.62	□□□□□ -0.39
CTSB-231	ENST00000534382	SEC61A2	Q9H9S3	476 aa		12.62	□□□□□ -0.39
CTSB-231	ENST00000534382	SMURF2	Q9HAU4	748 aa		12.62	□□□□□ -0.39
CTSB-231	ENST00000534382	ZNF224	Q9NZL3	707 aa		12.62	□□□□□ -0.39
CTSB-231	ENST00000534382	TMCC3	Q9ULS5	477 aa		12.62	□□□□□ -0.39
CTSB-231	ENST00000534382	UNC119B	A6NIH7	251 aa		12.61	□□□□□ -0.39
CTSB-231	ENST00000534382		A6NIZ1	184 aa		12.61	□□□□□ -0.39
CTSB-231	ENST00000534382	MGRN1	O60291	552 aa		12.61	□□□□□ -0.39
CTSB-231	ENST00000534382	OR10H3	O60404	316 aa		12.61	□□□□□ -0.39
CTSB-231	ENST00000534382	KRT36	O76013	467 aa		12.61	□□□□□ -0.39
CTSB-231	ENST00000534382	UBL3	O95164	117 aa		12.61	□□□□□ -0.39
CTSB-231	ENST00000534382	NDUFB2	O95178	105 aa		12.61	□□□□□ -0.39
CTSB-231	ENST00000534382	FARS2	O95363	451 aa	Known RBP	12.61	□□□□□ -0.39

Retrieved 100 of 20,778 RNA–protein pairs in 161.6 ms