RNA–Protein interactions for RNA: ENST00000534356.1

CASP4-213, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-213ENST00000534356 CBLN3Q6UW01 205 aa4.4□□□□□ -1.71
CASP4-213ENST00000534356 TGIF2LYQ8IUE0 185 aa4.4□□□□□ -1.71
CASP4-213ENST00000534356 CNPY4Q8N129 248 aa4.4□□□□□ -1.71
CASP4-213ENST00000534356 SLC34A3Q8N130 599 aa4.4□□□□□ -1.71
CASP4-213ENST00000534356 UBA3Q8TBC4 463 aa4.4□□□□□ -1.71
CASP4-213ENST00000534356 HTR3CQ8WXA8 447 aa4.4□□□□□ -1.71
CASP4-213ENST00000534356 ZNF578Q96N58 590 aaPredicted RBP4.4□□□□□ -1.71
CASP4-213ENST00000534356 ULBP1Q9BZM6 244 aa4.4□□□□□ -1.71
CASP4-213ENST00000534356 TCEAL2Q9H3H9 227 aaPredicted RBP4.4□□□□□ -1.71
CASP4-213ENST00000534356 SGK2Q9HBY8 427 aa4.4□□□□□ -1.71
CASP4-213ENST00000534356 ONECUT1Q9UBC0 465 aa4.4□□□□□ -1.71
CASP4-213ENST00000534356 GGA2Q9UJY4 613 aa4.4□□□□□ -1.71
CASP4-213ENST00000534356 LSM7Q9UK45 103 aaKnown RBP4.4□□□□□ -1.71
CASP4-213ENST00000534356 CHMP2BQ9UQN3 213 aa4.4□□□□□ -1.71
CASP4-213ENST00000534356 RP1L1Q8IWN7 2480 aaPredicted RBP4.4□□□□□ -1.71
CASP4-213ENST00000534356 ATP8B3O60423 1300 aa4.4□□□□□ -1.71
CASP4-213ENST00000534356 POLQO75417 2590 aa4.4□□□□□ -1.71
CASP4-213ENST00000534356 SPENQ96T58 3664 aaKnown RBP4.4□□□□□ -1.71
CASP4-213ENST00000534356 RAI1Q7Z5J4 1906 aaPredicted RBP4.39□□□□□ -1.71
CASP4-213ENST00000534356 A0A087WZY1 265 aa4.39□□□□□ -1.71
CASP4-213ENST00000534356 RAD51BO15315 384 aa4.39□□□□□ -1.71
CASP4-213ENST00000534356 LYPLA1O75608 230 aaPredicted RBP4.39□□□□□ -1.71
CASP4-213ENST00000534356 TNFSF15O95150 251 aa4.39□□□□□ -1.71
CASP4-213ENST00000534356 HLA-DRAP01903 254 aa4.39□□□□□ -1.71
CASP4-213ENST00000534356 OPN1LWP04000 364 aa4.39□□□□□ -1.71
CASP4-213ENST00000534356 SEMG1P04279 462 aa4.39□□□□□ -1.71
CASP4-213ENST00000534356 DLSTP36957 453 aa4.39□□□□□ -1.71
CASP4-213ENST00000534356 YWHAGP61981 247 aaKnown RBP eCLIP4.39□□□□□ -1.71
CASP4-213ENST00000534356 HMGN5P82970 282 aaKnown RBP4.39□□□□□ -1.71
CASP4-213ENST00000534356 C1orf61Q13536 156 aa4.39□□□□□ -1.71
CASP4-213ENST00000534356 GUSBP11Q6P575 273 aa4.39□□□□□ -1.71
CASP4-213ENST00000534356 OR52K2Q8NGK3 314 aa4.39□□□□□ -1.71
CASP4-213ENST00000534356 OR2T34Q8NGX1 318 aa4.39□□□□□ -1.71
CASP4-213ENST00000534356 TMA16Q96EY4 203 aaKnown RBP4.39□□□□□ -1.71
CASP4-213ENST00000534356 AKR1E2Q96JD6 320 aa4.39□□□□□ -1.71
CASP4-213ENST00000534356 OMDQ99983 421 aa4.39□□□□□ -1.71
CASP4-213ENST00000534356 DUSP16Q9BY84 665 aa4.39□□□□□ -1.71
CASP4-213ENST00000534356 PPDPFQ9H3Y8 114 aa4.39□□□□□ -1.71
CASP4-213ENST00000534356 FBXO44Q9H4M3 255 aa4.39□□□□□ -1.71
CASP4-213ENST00000534356 CALHM2Q9HA72 323 aa4.39□□□□□ -1.71
CASP4-213ENST00000534356 FANCFQ9NPI8 374 aa4.39□□□□□ -1.71
CASP4-213ENST00000534356 TAS2R3Q9NYW6 316 aa4.39□□□□□ -1.71
CASP4-213ENST00000534356 ADAM22Q9P0K1 906 aa4.39□□□□□ -1.71
CASP4-213ENST00000534356 ERVW-1Q9UQF0 538 aa4.39□□□□□ -1.71
CASP4-213ENST00000534356 TNRC6AQ8NDV7 1962 aaKnown RBP4.38□□□□□ -1.71
CASP4-213ENST00000534356 LOC100131303A0A0U1RQF7 123 aa4.38□□□□□ -1.71
CASP4-213ENST00000534356 RGSL1A5PLK6 1076 aa4.38□□□□□ -1.71
CASP4-213ENST00000534356 H3BQV1 296 aa4.38□□□□□ -1.71
CASP4-213ENST00000534356 K7EM74 188 aa4.38□□□□□ -1.71
CASP4-213ENST00000534356 FCN1O00602 326 aa4.38□□□□□ -1.71
CASP4-213ENST00000534356 DIRAS3O95661 229 aa4.38□□□□□ -1.71
CASP4-213ENST00000534356 ASS1P00966 412 aaKnown RBP4.38□□□□□ -1.71
CASP4-213ENST00000534356 IL1BP01584 269 aa4.38□□□□□ -1.71
CASP4-213ENST00000534356 IGF1P05019 195 aa4.38□□□□□ -1.71
CASP4-213ENST00000534356 CTSLP07711 333 aa4.38□□□□□ -1.71
CASP4-213ENST00000534356 OR8U8P0C7N1 319 aa4.38□□□□□ -1.71
CASP4-213ENST00000534356 CLUP10909 449 aa4.38□□□□□ -1.71
CASP4-213ENST00000534356 IGLL1P15814 213 aa4.38□□□□□ -1.71
CASP4-213ENST00000534356 POLR2EP19388 210 aaKnown RBP4.38□□□□□ -1.71
CASP4-213ENST00000534356 TNNI3P19429 210 aa4.38□□□□□ -1.71
CASP4-213ENST00000534356 CD86P42081 329 aa4.38□□□□□ -1.71
CASP4-213ENST00000534356 GCLMP48507 274 aa4.38□□□□□ -1.71
CASP4-213ENST00000534356 ARRB1P49407 418 aaPredicted RBP4.38□□□□□ -1.71
CASP4-213ENST00000534356 HTD2P86397 168 aa4.38□□□□□ -1.71
CASP4-213ENST00000534356 AANATQ16613 207 aa4.38□□□□□ -1.71
CASP4-213ENST00000534356 LRRC36Q1X8D7 754 aa4.38□□□□□ -1.71
CASP4-213ENST00000534356 DEFB133Q30KQ1 61 aa4.38□□□□□ -1.71
CASP4-213ENST00000534356 HNRNPA1L2Q32P51 320 aaKnown RBP4.38□□□□□ -1.71
CASP4-213ENST00000534356 CRYBG3Q68DQ2 2970 aa4.38□□□□□ -1.71
CASP4-213ENST00000534356 KCTD16Q68DU8 428 aa4.38□□□□□ -1.71
CASP4-213ENST00000534356 EFL1Q7Z2Z2 1120 aaKnown RBP4.38□□□□□ -1.71
CASP4-213ENST00000534356 HSD17B13Q7Z5P4 300 aaPredicted RBP4.38□□□□□ -1.71
CASP4-213ENST00000534356 TMEM179BQ7Z7N9 219 aa4.38□□□□□ -1.71
CASP4-213ENST00000534356 C17orf82Q86X59 251 aaPredicted RBP4.38□□□□□ -1.71
CASP4-213ENST00000534356 OR4C6Q8NH72 309 aa4.38□□□□□ -1.71
CASP4-213ENST00000534356 SYAP1Q96A49 352 aaPredicted RBP4.38□□□□□ -1.71
CASP4-213ENST00000534356 FGGYQ96C11 551 aa4.38□□□□□ -1.71
CASP4-213ENST00000534356 ZNF414Q96IQ9 312 aa4.38□□□□□ -1.71
CASP4-213ENST00000534356 BMFQ96LC9 184 aa4.38□□□□□ -1.71
CASP4-213ENST00000534356 CNPY3Q9BT09 278 aa4.38□□□□□ -1.71
CASP4-213ENST00000534356 PTGES2Q9H7Z7 377 aa4.38□□□□□ -1.71
CASP4-213ENST00000534356 WDR76Q9H967 626 aa4.38□□□□□ -1.71
CASP4-213ENST00000534356 DMAC2Q9NW81 257 aa4.38□□□□□ -1.71
CASP4-213ENST00000534356 SUN2Q9UH99 717 aa4.38□□□□□ -1.71
CASP4-213ENST00000534356 ZNF221Q9UK13 617 aa4.38□□□□□ -1.71
CASP4-213ENST00000534356 SMC3Q9UQE7 1217 aa4.38□□□□□ -1.71
CASP4-213ENST00000534356 SNX10Q9Y5X0 201 aa4.38□□□□□ -1.71
CASP4-213ENST00000534356 U3KQV3 271 aa4.38□□□□□ -1.71
CASP4-213ENST00000534356 SPACA6W5XKT8 324 aa4.38□□□□□ -1.71
CASP4-213ENST00000534356 PRRC2AP48634 2157 aaKnown RBP4.38□□□□□ -1.71
CASP4-213ENST00000534356 LRBAP50851 2863 aa4.38□□□□□ -1.71
CASP4-213ENST00000534356 ITPR3Q14573 2671 aa4.38□□□□□ -1.71
CASP4-213ENST00000534356 MDC1Q14676 2089 aaKnown RBP4.37□□□□□ -1.71
CASP4-213ENST00000534356 CELSR2Q9HCU4 2923 aa4.37□□□□□ -1.71
CASP4-213ENST00000534356 H0Y9J4 135 aa4.37□□□□□ -1.71
CASP4-213ENST00000534356 H3BMQ9 156 aa4.37□□□□□ -1.71
CASP4-213ENST00000534356 K7ERQ8 282 aa4.37□□□□□ -1.71
CASP4-213ENST00000534356 DFNA5O60443 496 aa4.37□□□□□ -1.71
CASP4-213ENST00000534356 ACTL6AO96019 429 aa4.37□□□□□ -1.71
CASP4-213ENST00000534356 AK1P00568 194 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms