RNA–Protein interactions for RNA: ENST00000533953.5

CMTM1-219, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 934 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-219ENST00000533953 SKA3Q8IX90 412 aa11.67□□□□□ -0.54
CMTM1-219ENST00000533953 NOXO1Q8NFA2 376 aa11.67□□□□□ -0.54
CMTM1-219ENST00000533953 ZNF519Q8TB69 540 aa11.67□□□□□ -0.54
CMTM1-219ENST00000533953 RASD2Q96D21 266 aa11.67□□□□□ -0.54
CMTM1-219ENST00000533953 NMD3Q96D46 503 aaKnown RBP11.67□□□□□ -0.54
CMTM1-219ENST00000533953 BOD1Q96IK1 185 aa11.67□□□□□ -0.54
CMTM1-219ENST00000533953 RADILQ96JH8 1075 aa11.67□□□□□ -0.54
CMTM1-219ENST00000533953 FOXN4Q96NZ1 517 aa11.67□□□□□ -0.54
CMTM1-219ENST00000533953 FOXB1Q99853 325 aa11.67□□□□□ -0.54
CMTM1-219ENST00000533953 MAGIXQ9H6Y5 334 aa11.67□□□□□ -0.54
CMTM1-219ENST00000533953 ZNF224Q9NZL3 707 aa11.67□□□□□ -0.54
CMTM1-219ENST00000533953 TMCC3Q9ULS5 477 aa11.67□□□□□ -0.54
CMTM1-219ENST00000533953 MOKQ9UQ07 419 aa11.67□□□□□ -0.54
CMTM1-219ENST00000533953 IER3IP1Q9Y5U9 82 aa11.67□□□□□ -0.54
CMTM1-219ENST00000533953 ARPC4-TTLL3A0A0A6YYG9 625 aa11.66□□□□□ -0.54
CMTM1-219ENST00000533953 DHRS12A0PJE2 317 aa11.66□□□□□ -0.54
CMTM1-219ENST00000533953 E7EQL1 145 aa11.66□□□□□ -0.54
CMTM1-219ENST00000533953 ATP6V1G2-DDX39BF2Z307 99 aa11.66□□□□□ -0.54
CMTM1-219ENST00000533953 STAMBPO95630 424 aa11.66□□□□□ -0.54
CMTM1-219ENST00000533953 WNT11O96014 354 aa11.66□□□□□ -0.54
CMTM1-219ENST00000533953 GASTP01350 101 aa11.66□□□□□ -0.54
CMTM1-219ENST00000533953 IGFBP1P08833 259 aaPredicted RBP11.66□□□□□ -0.54
CMTM1-219ENST00000533953 PTAFRP25105 342 aa11.66□□□□□ -0.54
CMTM1-219ENST00000533953 IDH3GP51553 393 aaPredicted RBP11.66□□□□□ -0.54
CMTM1-219ENST00000533953 HMGA2P52926 109 aa11.66□□□□□ -0.54
CMTM1-219ENST00000533953 SH3BGRP55822 239 aaPredicted RBP11.66□□□□□ -0.54
CMTM1-219ENST00000533953 CD47Q08722 323 aa11.66□□□□□ -0.54
CMTM1-219ENST00000533953 NPRL3Q12980 569 aa11.66□□□□□ -0.54
CMTM1-219ENST00000533953 ETFDHQ16134 617 aa11.66□□□□□ -0.54
CMTM1-219ENST00000533953 ZNF672Q499Z4 452 aaPredicted RBP11.66□□□□□ -0.54
CMTM1-219ENST00000533953 OR2T5Q6IEZ7 315 aa11.66□□□□□ -0.54
CMTM1-219ENST00000533953 KLHL17Q6TDP4 642 aa11.66□□□□□ -0.54
CMTM1-219ENST00000533953 TMEM108Q6UXF1 575 aa11.66□□□□□ -0.54
CMTM1-219ENST00000533953 TMEM179BQ7Z7N9 219 aa11.66□□□□□ -0.54
CMTM1-219ENST00000533953 ARIH2OSQ8N7S6 290 aa11.66□□□□□ -0.54
CMTM1-219ENST00000533953 OR2T29Q8NH02 315 aa11.66□□□□□ -0.54
CMTM1-219ENST00000533953 MAGEE2Q8TD90 523 aaPredicted RBP11.66□□□□□ -0.54
CMTM1-219ENST00000533953 SLCO4A1Q96BD0 722 aa11.66□□□□□ -0.54
CMTM1-219ENST00000533953 MS4A3Q96HJ5 214 aa11.66□□□□□ -0.54
CMTM1-219ENST00000533953 KCNK17Q96T54 332 aa11.66□□□□□ -0.54
CMTM1-219ENST00000533953 TMEM38BQ9NVV0 291 aa11.66□□□□□ -0.54
CMTM1-219ENST00000533953 B3GNT2Q9NY97 397 aa11.66□□□□□ -0.54
CMTM1-219ENST00000533953 CISD1Q9NZ45 108 aaKnown RBP11.66□□□□□ -0.54
CMTM1-219ENST00000533953 UGT2A1Q9Y4X1 527 aa11.66□□□□□ -0.54
CMTM1-219ENST00000533953 ATP23Q9Y6H3 246 aa11.66□□□□□ -0.54
CMTM1-219ENST00000533953 MYO9AB2RTY4 2548 aa11.66□□□□□ -0.54
CMTM1-219ENST00000533953 TEX13CA0A0J9YWL9 993 aa11.65□□□□□ -0.54
CMTM1-219ENST00000533953 AQP12BA6NM10 295 aa11.65□□□□□ -0.54
CMTM1-219ENST00000533953 SOCS2O14508 198 aa11.65□□□□□ -0.54
CMTM1-219ENST00000533953 CCNB2O95067 398 aa11.65□□□□□ -0.54
CMTM1-219ENST00000533953 NDUFB2O95178 105 aa11.65□□□□□ -0.54
CMTM1-219ENST00000533953 PPP1R3DO95685 299 aa11.65□□□□□ -0.54
CMTM1-219ENST00000533953 IGHMP01871 453 aa11.65□□□□□ -0.54
CMTM1-219ENST00000533953 SCG5P05408 212 aa11.65□□□□□ -0.54
CMTM1-219ENST00000533953 SOD3P08294 240 aa11.65□□□□□ -0.54
CMTM1-219ENST00000533953 CD14P08571 375 aa11.65□□□□□ -0.54
CMTM1-219ENST00000533953 CECR9P0C854 216 aa11.65□□□□□ -0.54
CMTM1-219ENST00000533953 RAP2AP10114 183 aa11.65□□□□□ -0.54
CMTM1-219ENST00000533953 CBR1P16152 277 aa11.65□□□□□ -0.54
CMTM1-219ENST00000533953 CALCRP30988 508 aa11.65□□□□□ -0.54
CMTM1-219ENST00000533953 GSSP48637 474 aa11.65□□□□□ -0.54
CMTM1-219ENST00000533953 CDH11P55287 796 aa11.65□□□□□ -0.54
CMTM1-219ENST00000533953 SGCAQ16586 387 aa11.65□□□□□ -0.54
CMTM1-219ENST00000533953 DEFB113Q30KQ7 82 aa11.65□□□□□ -0.54
CMTM1-219ENST00000533953 MESTQ5EB52 335 aa11.65□□□□□ -0.54
CMTM1-219ENST00000533953 C1orf94Q6P1W5 598 aa11.65□□□□□ -0.54
CMTM1-219ENST00000533953 SLC25A47Q6Q0C1 308 aa11.65□□□□□ -0.54
CMTM1-219ENST00000533953 AQP12AQ8IXF9 295 aa11.65□□□□□ -0.54
CMTM1-219ENST00000533953 LRRC18Q8N456 261 aa11.65□□□□□ -0.54
CMTM1-219ENST00000533953 SLC22A24Q8N4F4 322 aa11.65□□□□□ -0.54
CMTM1-219ENST00000533953 GNPDA2Q8TDQ7 276 aa11.65□□□□□ -0.54
CMTM1-219ENST00000533953 GTPBP3Q969Y2 492 aaKnown RBP11.65□□□□□ -0.54
CMTM1-219ENST00000533953 SAMD8Q96LT4 415 aa11.65□□□□□ -0.54
CMTM1-219ENST00000533953 SLC38A2Q96QD8 506 aa11.65□□□□□ -0.54
CMTM1-219ENST00000533953 TRIM15Q9C019 465 aa11.65□□□□□ -0.54
CMTM1-219ENST00000533953 EGLN3Q9H6Z9 239 aa11.65□□□□□ -0.54
CMTM1-219ENST00000533953 GRHPRQ9UBQ7 328 aa11.65□□□□□ -0.54
CMTM1-219ENST00000533953 POU2F3Q9UKI9 436 aa11.65□□□□□ -0.54
CMTM1-219ENST00000533953 LAMP3Q9UQV4 416 aa11.65□□□□□ -0.54
CMTM1-219ENST00000533953 SAMHD1Q9Y3Z3 626 aaKnown RBP11.65□□□□□ -0.54
CMTM1-219ENST00000533953 PRRC2AP48634 2157 aaKnown RBP11.65□□□□□ -0.54
CMTM1-219ENST00000533953 ANKRD17O75179 2603 aaKnown RBP11.64□□□□□ -0.55
CMTM1-219ENST00000533953 TCRBV3S1A0A5B6 114 aa11.64□□□□□ -0.55
CMTM1-219ENST00000533953 KRT36O76013 467 aa11.64□□□□□ -0.55
CMTM1-219ENST00000533953 CST1P01037 141 aa11.64□□□□□ -0.55
CMTM1-219ENST00000533953 FPR3P25089 353 aa11.64□□□□□ -0.55
CMTM1-219ENST00000533953 GIPRP48546 466 aa11.64□□□□□ -0.55
CMTM1-219ENST00000533953 PTDSS1P48651 473 aaKnown RBP11.64□□□□□ -0.55
CMTM1-219ENST00000533953 TESK1Q15569 626 aa11.64□□□□□ -0.55
CMTM1-219ENST00000533953 PGGHGQ32M88 737 aa11.64□□□□□ -0.55
CMTM1-219ENST00000533953 ZNF770Q6IQ21 691 aaPredicted RBP11.64□□□□□ -0.55
CMTM1-219ENST00000533953 SMARCD3Q6STE5 483 aa11.64□□□□□ -0.55
CMTM1-219ENST00000533953 ZNF627Q7L945 461 aa11.64□□□□□ -0.55
CMTM1-219ENST00000533953 FAM122BQ7Z309 247 aa11.64□□□□□ -0.55
CMTM1-219ENST00000533953 HS3ST5Q8IZT8 346 aa11.64□□□□□ -0.55
CMTM1-219ENST00000533953 ZNF611Q8N823 705 aa11.64□□□□□ -0.55
CMTM1-219ENST00000533953 AQP11Q8NBQ7 271 aa11.64□□□□□ -0.55
CMTM1-219ENST00000533953 SMAP2Q8WU79 429 aaPredicted RBP11.64□□□□□ -0.55
CMTM1-219ENST00000533953 ZNF75AQ96N20 296 aa11.64□□□□□ -0.55
CMTM1-219ENST00000533953 ERMAPQ96PL5 475 aaPredicted RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms