RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 NANOGNBQ7Z5D8 188 aa8.3□□□□□ -1.08
SSBP3-215ENST00000533946 NRMQ8IXM6 262 aa8.3□□□□□ -1.08
SSBP3-215ENST00000533946 LRRC18Q8N456 261 aa8.3□□□□□ -1.08
SSBP3-215ENST00000533946 SLC22A24Q8N4F4 322 aa8.3□□□□□ -1.08
SSBP3-215ENST00000533946 CPEB3Q8NE35 698 aaKnown RBP8.3□□□□□ -1.08
SSBP3-215ENST00000533946 BHLHE22Q8NFJ8 381 aaPredicted RBP8.3□□□□□ -1.08
SSBP3-215ENST00000533946 OR4K5Q8NGD3 323 aa8.3□□□□□ -1.08
SSBP3-215ENST00000533946 OR13C2Q8NGS9 318 aa8.3□□□□□ -1.08
SSBP3-215ENST00000533946 OR51A7Q8NH64 312 aa8.3□□□□□ -1.08
SSBP3-215ENST00000533946 OR6X1Q8NH79 312 aa8.3□□□□□ -1.08
SSBP3-215ENST00000533946 NSMAFQ92636 917 aa8.3□□□□□ -1.08
SSBP3-215ENST00000533946 NABP1Q96AH0 204 aa8.3□□□□□ -1.08
SSBP3-215ENST00000533946 SGTBQ96EQ0 304 aa8.3□□□□□ -1.08
SSBP3-215ENST00000533946 HSH2DQ96JZ2 352 aa8.3□□□□□ -1.08
SSBP3-215ENST00000533946 LRR1Q96L50 414 aa8.3□□□□□ -1.08
SSBP3-215ENST00000533946 SYT3Q9BQG1 590 aa8.3□□□□□ -1.08
SSBP3-215ENST00000533946 KATNB1Q9BVA0 655 aa8.3□□□□□ -1.08
SSBP3-215ENST00000533946 PLK3Q9H4B4 646 aa8.3□□□□□ -1.08
SSBP3-215ENST00000533946 YAE1D1Q9NRH1 226 aa8.3□□□□□ -1.08
SSBP3-215ENST00000533946 TMEM38BQ9NVV0 291 aa8.3□□□□□ -1.08
SSBP3-215ENST00000533946 IL20RAQ9UHF4 553 aa8.3□□□□□ -1.08
SSBP3-215ENST00000533946 ZNF229Q9UJW7 825 aa8.3□□□□□ -1.08
SSBP3-215ENST00000533946 ZNF346Q9UL40 294 aaKnown RBP8.3□□□□□ -1.08
SSBP3-215ENST00000533946 POFUT2Q9Y2G5 429 aa8.3□□□□□ -1.08
SSBP3-215ENST00000533946 A0A087WUU8 490 aa8.29□□□□□ -1.08
SSBP3-215ENST00000533946 VWC2LB2RUY7 222 aa8.29□□□□□ -1.08
SSBP3-215ENST00000533946 hCG_2039718K7EN88 272 aa8.29□□□□□ -1.08
SSBP3-215ENST00000533946 DHHO43323 396 aa8.29□□□□□ -1.08
SSBP3-215ENST00000533946 MGRN1O60291 552 aa8.29□□□□□ -1.08
SSBP3-215ENST00000533946 OR6A2O95222 327 aa8.29□□□□□ -1.08
SSBP3-215ENST00000533946 GPANK1O95872 356 aa8.29□□□□□ -1.08
SSBP3-215ENST00000533946 F12P00748 615 aaPredicted RBP8.29□□□□□ -1.08
SSBP3-215ENST00000533946 CRYAAP02489 173 aa8.29□□□□□ -1.08
SSBP3-215ENST00000533946 ADRA2AP08913 450 aa8.29□□□□□ -1.08
SSBP3-215ENST00000533946 MMP7P09237 267 aaPredicted RBP8.29□□□□□ -1.08
SSBP3-215ENST00000533946 FAM157BP0CG42 384 aa8.29□□□□□ -1.08
SSBP3-215ENST00000533946 IFI30P13284 250 aa8.29□□□□□ -1.08
SSBP3-215ENST00000533946 COL8A2P25067 703 aa8.29□□□□□ -1.08
SSBP3-215ENST00000533946 EFNA4P52798 201 aa8.29□□□□□ -1.08
SSBP3-215ENST00000533946 FXYD6P3P58550 94 aa8.29□□□□□ -1.08
SSBP3-215ENST00000533946 PSME3P61289 254 aa8.29□□□□□ -1.08
SSBP3-215ENST00000533946 GSG1Q2KHT4 349 aa8.29□□□□□ -1.08
SSBP3-215ENST00000533946 TMEM249Q2WGJ8 235 aa8.29□□□□□ -1.08
SSBP3-215ENST00000533946 UGT2A3Q6UWM9 527 aa8.29□□□□□ -1.08
SSBP3-215ENST00000533946 C5orf46Q6UWT4 87 aa8.29□□□□□ -1.08
SSBP3-215ENST00000533946 CBLL1Q75N03 491 aa8.29□□□□□ -1.08
SSBP3-215ENST00000533946 ABHD12BQ7Z5M8 362 aaPredicted RBP8.29□□□□□ -1.08
SSBP3-215ENST00000533946 DEPDC4Q8N2C3 294 aa8.29□□□□□ -1.08
SSBP3-215ENST00000533946 ANKK1Q8NFD2 765 aa8.29□□□□□ -1.08
SSBP3-215ENST00000533946 AKR7LQ8NHP1 331 aa8.29□□□□□ -1.08
SSBP3-215ENST00000533946 RP9Q8TA86 221 aaKnown RBP8.29□□□□□ -1.08
SSBP3-215ENST00000533946 SLC25A44Q96H78 314 aaPredicted RBP8.29□□□□□ -1.08
SSBP3-215ENST00000533946 SEPHS2Q99611 448 aa8.29□□□□□ -1.08
SSBP3-215ENST00000533946 FAIMQ9NVQ4 179 aa8.29□□□□□ -1.08
SSBP3-215ENST00000533946 GID8Q9NWU2 228 aa8.29□□□□□ -1.08
SSBP3-215ENST00000533946 PRDM4Q9UKN5 801 aa8.29□□□□□ -1.08
SSBP3-215ENST00000533946 ADAM18Q9Y3Q7 739 aa8.29□□□□□ -1.08
SSBP3-215ENST00000533946 ARHGAP32A7KAX9 2087 aa8.29□□□□□ -1.08
SSBP3-215ENST00000533946 TRBV4-1A0A0J9YWV2 114 aa8.28□□□□□ -1.08
SSBP3-215ENST00000533946 MCIDASD6RGH6 385 aa8.28□□□□□ -1.08
SSBP3-215ENST00000533946 SNX3O60493 162 aa8.28□□□□□ -1.08
SSBP3-215ENST00000533946 CRLF1O75462 422 aa8.28□□□□□ -1.08
SSBP3-215ENST00000533946 NCR1O76036 304 aa8.28□□□□□ -1.08
SSBP3-215ENST00000533946 MPZL1O95297 269 aa8.28□□□□□ -1.08
SSBP3-215ENST00000533946 BCL10O95999 233 aa8.28□□□□□ -1.08
SSBP3-215ENST00000533946 NPPAP01160 153 aa8.28□□□□□ -1.08
SSBP3-215ENST00000533946 HPXP02790 462 aa8.28□□□□□ -1.08
SSBP3-215ENST00000533946 IGHV4-31P0DP07 118 aa8.28□□□□□ -1.08
SSBP3-215ENST00000533946 NAT2P11245 290 aa8.28□□□□□ -1.08
SSBP3-215ENST00000533946 ACADSP16219 412 aa8.28□□□□□ -1.08
SSBP3-215ENST00000533946 ZNF16P17020 682 aaPredicted RBP8.28□□□□□ -1.08
SSBP3-215ENST00000533946 NPR2P20594 1047 aa8.28□□□□□ -1.08
SSBP3-215ENST00000533946 NR4A1P22736 598 aa8.28□□□□□ -1.08
SSBP3-215ENST00000533946 APEX1P27695 318 aaKnown RBP8.28□□□□□ -1.08
SSBP3-215ENST00000533946 LSP1P33241 339 aa8.28□□□□□ -1.08
SSBP3-215ENST00000533946 SH3BGRP55822 239 aaPredicted RBP8.28□□□□□ -1.08
SSBP3-215ENST00000533946 ERVK-25P63136 954 aa8.28□□□□□ -1.08
SSBP3-215ENST00000533946 VLDLRP98155 873 aa8.28□□□□□ -1.08
SSBP3-215ENST00000533946 DAG1Q14118 895 aa8.28□□□□□ -1.08
SSBP3-215ENST00000533946 GGTLC2Q14390 218 aa8.28□□□□□ -1.08
SSBP3-215ENST00000533946 FXNQ16595 210 aa8.28□□□□□ -1.08
SSBP3-215ENST00000533946 KRTAP21-3Q3LHN1 58 aa8.28□□□□□ -1.08
SSBP3-215ENST00000533946 ERICH5Q6P6B1 374 aa8.28□□□□□ -1.08
SSBP3-215ENST00000533946 SLC25A47Q6Q0C1 308 aa8.28□□□□□ -1.08
SSBP3-215ENST00000533946 THSD4Q6ZMP0 1018 aa8.28□□□□□ -1.08
SSBP3-215ENST00000533946 SLC30A8Q8IWU4 369 aa8.28□□□□□ -1.08
SSBP3-215ENST00000533946 PCYOX1LQ8NBM8 494 aa8.28□□□□□ -1.08
SSBP3-215ENST00000533946 NUP37Q8NFH4 326 aa8.28□□□□□ -1.08
SSBP3-215ENST00000533946 FAM168AQ92567 244 aa8.28□□□□□ -1.08
SSBP3-215ENST00000533946 YIPF5Q969M3 257 aa8.28□□□□□ -1.08
SSBP3-215ENST00000533946 ZNF566Q969W8 418 aa8.28□□□□□ -1.08
SSBP3-215ENST00000533946 BPIFA2Q96DR5 249 aa8.28□□□□□ -1.08
SSBP3-215ENST00000533946 MPP4Q96JB8 637 aa8.28□□□□□ -1.08
SSBP3-215ENST00000533946 C7orf34Q96L11 122 aa8.28□□□□□ -1.08
SSBP3-215ENST00000533946 PRRC1Q96M27 445 aa8.28□□□□□ -1.08
SSBP3-215ENST00000533946 ADAD1Q96M93 576 aaKnown RBP8.28□□□□□ -1.08
SSBP3-215ENST00000533946 KCNK17Q96T54 332 aa8.28□□□□□ -1.08
SSBP3-215ENST00000533946 RHNO1Q9BSD3 238 aa8.28□□□□□ -1.08
SSBP3-215ENST00000533946 POFUT1Q9H488 388 aa8.28□□□□□ -1.08
SSBP3-215ENST00000533946 OBP2BQ9NPH6 170 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms