RNA–Protein interactions for RNA: ENST00000533931.1

CTTN-215, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-215ENST00000533931 RUNX1T1Q06455 604 aa13.73□□□□□ -0.21
CTTN-215ENST00000533931 FAPQ12884 760 aa13.73□□□□□ -0.21
CTTN-215ENST00000533931 NPRL3Q12980 569 aa13.73□□□□□ -0.21
CTTN-215ENST00000533931 GINS1Q14691 196 aa13.73□□□□□ -0.21
CTTN-215ENST00000533931 CLEC12AQ5QGZ9 265 aa13.73□□□□□ -0.21
CTTN-215ENST00000533931 SFRP5Q5T4F7 317 aa13.73□□□□□ -0.21
CTTN-215ENST00000533931 DNM1P34Q6PK57 102 aa13.73□□□□□ -0.21
CTTN-215ENST00000533931 STAC2Q6ZMT1 411 aa13.73□□□□□ -0.21
CTTN-215ENST00000533931 P2RY8Q86VZ1 359 aa13.73□□□□□ -0.21
CTTN-215ENST00000533931 ZNF433Q8N7K0 673 aaPredicted RBP13.73□□□□□ -0.21
CTTN-215ENST00000533931 ACBD4Q8NC06 268 aa13.73□□□□□ -0.21
CTTN-215ENST00000533931 OR4Q3Q8NH05 313 aa13.73□□□□□ -0.21
CTTN-215ENST00000533931 KISS1RQ969F8 398 aaPredicted RBP13.73□□□□□ -0.21
CTTN-215ENST00000533931 ALKBH3Q96Q83 286 aaPredicted RBP13.73□□□□□ -0.21
CTTN-215ENST00000533931 VCXQ9H320 206 aa13.73□□□□□ -0.21
CTTN-215ENST00000533931 GPR35Q9HC97 309 aa13.73□□□□□ -0.21
CTTN-215ENST00000533931 CMC2Q9NRP2 79 aa13.73□□□□□ -0.21
CTTN-215ENST00000533931 MYO7BQ6PIF6 2116 aa13.73□□□□□ -0.21
CTTN-215ENST00000533931 SLC22A23A1A5C7 686 aa13.72□□□□□ -0.21
CTTN-215ENST00000533931 NKX2-6A6NCS4 301 aa13.72□□□□□ -0.21
CTTN-215ENST00000533931 RIIAD1A6NNX1 92 aa13.72□□□□□ -0.21
CTTN-215ENST00000533931 ZAR1LA6NP61 321 aa13.72□□□□□ -0.21
CTTN-215ENST00000533931 C16orf97H3BN30 126 aa13.72□□□□□ -0.21
CTTN-215ENST00000533931 M0R3G1 203 aa13.72□□□□□ -0.21
CTTN-215ENST00000533931 ARHGEF9O43307 516 aa13.72□□□□□ -0.21
CTTN-215ENST00000533931 RENP00797 406 aa13.72□□□□□ -0.21
CTTN-215ENST00000533931 ITGA5P08648 1049 aa13.72□□□□□ -0.21
CTTN-215ENST00000533931 IGFBP1P08833 259 aaPredicted RBP13.72□□□□□ -0.21
CTTN-215ENST00000533931 RNF224P0DH78 156 aa13.72□□□□□ -0.21
CTTN-215ENST00000533931 HIST1H1CP16403 213 aaKnown RBP13.72□□□□□ -0.21
CTTN-215ENST00000533931 IGFBP2P18065 325 aa13.72□□□□□ -0.21
CTTN-215ENST00000533931 IGHV1-2P23083 117 aa13.72□□□□□ -0.21
CTTN-215ENST00000533931 POU1F1P28069 291 aa13.72□□□□□ -0.21
CTTN-215ENST00000533931 UGT2B10P36537 528 aa13.72□□□□□ -0.21
CTTN-215ENST00000533931 CD47Q08722 323 aa13.72□□□□□ -0.21
CTTN-215ENST00000533931 PTGES3Q15185 160 aaKnown RBP13.72□□□□□ -0.21
CTTN-215ENST00000533931 SLX4IPQ5VYV7 408 aa13.72□□□□□ -0.21
CTTN-215ENST00000533931 CARD17Q5XLA6 110 aa13.72□□□□□ -0.21
CTTN-215ENST00000533931 ANKRD34AQ69YU3 496 aa13.72□□□□□ -0.21
CTTN-215ENST00000533931 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.72□□□□□ -0.21
CTTN-215ENST00000533931 JAZF1Q86VZ6 243 aa13.72□□□□□ -0.21
CTTN-215ENST00000533931 WDFY1Q8IWB7 410 aa13.72□□□□□ -0.21
CTTN-215ENST00000533931 CCDC36Q8IYA8 594 aa13.72□□□□□ -0.21
CTTN-215ENST00000533931 MCHR2Q969V1 340 aa13.72□□□□□ -0.21
CTTN-215ENST00000533931 RASD2Q96D21 266 aa13.72□□□□□ -0.21
CTTN-215ENST00000533931 MUS81Q96NY9 551 aa13.72□□□□□ -0.21
CTTN-215ENST00000533931 SLC38A2Q96QD8 506 aa13.72□□□□□ -0.21
CTTN-215ENST00000533931 CRLF2Q9HC73 371 aa13.72□□□□□ -0.21
CTTN-215ENST00000533931 MOV10Q9HCE1 1003 aaKnown RBP13.72□□□□□ -0.21
CTTN-215ENST00000533931 OBP2BQ9NPH6 170 aa13.72□□□□□ -0.21
CTTN-215ENST00000533931 INTS1Q8N201 2190 aaKnown RBP13.71□□□□□ -0.21
CTTN-215ENST00000533931 ZNF99A8MXY4 864 aaPredicted RBP13.71□□□□□ -0.21
CTTN-215ENST00000533931 E9PQ18 207 aa13.71□□□□□ -0.21
CTTN-215ENST00000533931 H0YJX3 145 aa13.71□□□□□ -0.21
CTTN-215ENST00000533931 DHHO43323 396 aa13.71□□□□□ -0.21
CTTN-215ENST00000533931 MITFO75030 526 aaPredicted RBP13.71□□□□□ -0.21
CTTN-215ENST00000533931 IGHV3-9P01782 118 aa13.71□□□□□ -0.21
CTTN-215ENST00000533931 QDPRP09417 244 aa13.71□□□□□ -0.21
CTTN-215ENST00000533931 ZNF3P17036 446 aa13.71□□□□□ -0.21
CTTN-215ENST00000533931 IL32P24001 234 aa13.71□□□□□ -0.21
CTTN-215ENST00000533931 PEX2P28328 305 aa13.71□□□□□ -0.21
CTTN-215ENST00000533931 CRABP1P29762 137 aa13.71□□□□□ -0.21
CTTN-215ENST00000533931 CDKN2AP42771 156 aaKnown RBP13.71□□□□□ -0.21
CTTN-215ENST00000533931 ZNF84P51523 738 aa13.71□□□□□ -0.21
CTTN-215ENST00000533931 SLC25A1P53007 311 aa13.71□□□□□ -0.21
CTTN-215ENST00000533931 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.71□□□□□ -0.21
CTTN-215ENST00000533931 CEACAM16Q2WEN9 425 aa13.71□□□□□ -0.21
CTTN-215ENST00000533931 PHYHD1Q5SRE7 291 aa13.71□□□□□ -0.21
CTTN-215ENST00000533931 ZNF362Q5T0B9 420 aaPredicted RBP13.71□□□□□ -0.21
CTTN-215ENST00000533931 ANKRD16Q6P6B7 361 aa13.71□□□□□ -0.21
CTTN-215ENST00000533931 LRFN4Q6PJG9 635 aa13.71□□□□□ -0.21
CTTN-215ENST00000533931 SLC25A47Q6Q0C1 308 aa13.71□□□□□ -0.21
CTTN-215ENST00000533931 FOXL2NBQ6ZUU3 175 aa13.71□□□□□ -0.21
CTTN-215ENST00000533931 LINGO2Q7L985 606 aa13.71□□□□□ -0.21
CTTN-215ENST00000533931 CXorf67Q86X51 503 aaPredicted RBP13.71□□□□□ -0.21
CTTN-215ENST00000533931 DDOQ99489 341 aa13.71□□□□□ -0.21
CTTN-215ENST00000533931 SLC29A1Q99808 456 aa13.71□□□□□ -0.21
CTTN-215ENST00000533931 GRIP2Q9C0E4 1043 aa13.71□□□□□ -0.21
CTTN-215ENST00000533931 RACGAP1Q9H0H5 632 aa13.71□□□□□ -0.21
CTTN-215ENST00000533931 VCX3BQ9H321 246 aa13.71□□□□□ -0.21
CTTN-215ENST00000533931 FN3KQ9H479 309 aa13.71□□□□□ -0.21
CTTN-215ENST00000533931 NPDC1Q9NQX5 325 aaPredicted RBP13.71□□□□□ -0.21
CTTN-215ENST00000533931 SMPD3Q9NY59 655 aaPredicted RBP13.71□□□□□ -0.21
CTTN-215ENST00000533931 NKX1-2Q9UD57 310 aaPredicted RBP13.71□□□□□ -0.21
CTTN-215ENST00000533931 FKBP7Q9Y680 259 aa13.71□□□□□ -0.21
CTTN-215ENST00000533931 SURF4O15260 269 aa13.7□□□□□ -0.22
CTTN-215ENST00000533931 ATP6V1G2O95670 118 aa13.7□□□□□ -0.22
CTTN-215ENST00000533931 NPR2P20594 1047 aa13.7□□□□□ -0.22
CTTN-215ENST00000533931 CCKARP32238 428 aa13.7□□□□□ -0.22
CTTN-215ENST00000533931 CENPAP49450 140 aa13.7□□□□□ -0.22
CTTN-215ENST00000533931 MRPS34P82930 218 aaKnown RBP13.7□□□□□ -0.22
CTTN-215ENST00000533931 GABRA6Q16445 453 aa13.7□□□□□ -0.22
CTTN-215ENST00000533931 TIMM23BQ5SRD1 257 aa13.7□□□□□ -0.22
CTTN-215ENST00000533931 C12orf73Q69YU5 71 aa13.7□□□□□ -0.22
CTTN-215ENST00000533931 ACSM5Q6NUN0 579 aa13.7□□□□□ -0.22
CTTN-215ENST00000533931 LEG1Q6P5S2 330 aa13.7□□□□□ -0.22
CTTN-215ENST00000533931 PTCHD4Q6ZW05 846 aa13.7□□□□□ -0.22
CTTN-215ENST00000533931 BHLHA15Q7RTS1 189 aaPredicted RBP13.7□□□□□ -0.22
CTTN-215ENST00000533931 DPPA2Q7Z7J5 298 aa13.7□□□□□ -0.22
CTTN-215ENST00000533931 ZBTB46Q86UZ6 589 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms