RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 BHLHE40O14503 412 aa15.38■□□□□ 0.05
NXF1-216ENST00000533499 IMPA2O14732 288 aa15.38■□□□□ 0.05
NXF1-216ENST00000533499 ARPC3O15145 178 aa15.38■□□□□ 0.05
NXF1-216ENST00000533499 IDH3BO43837 385 aa15.38■□□□□ 0.05
NXF1-216ENST00000533499 SLC2A10O95528 541 aa15.38■□□□□ 0.05
NXF1-216ENST00000533499 IFNGP01579 166 aa15.38■□□□□ 0.05
NXF1-216ENST00000533499 ALPLP05186 524 aa15.38■□□□□ 0.05
NXF1-216ENST00000533499 NR2C1P13056 603 aa15.38■□□□□ 0.05
NXF1-216ENST00000533499 APEHP13798 732 aaKnown RBP15.38■□□□□ 0.05
NXF1-216ENST00000533499 CDKN2AP42771 156 aaKnown RBP15.38■□□□□ 0.05
NXF1-216ENST00000533499 GIPRP48546 466 aa15.38■□□□□ 0.05
NXF1-216ENST00000533499 ESRRGP62508 458 aa15.38■□□□□ 0.05
NXF1-216ENST00000533499 ARF1P84077 181 aaKnown RBP15.38■□□□□ 0.05
NXF1-216ENST00000533499 P2RY6Q15077 328 aa15.38■□□□□ 0.05
NXF1-216ENST00000533499 STK11Q15831 433 aa15.38■□□□□ 0.05
NXF1-216ENST00000533499 PTCHD4Q6ZW05 846 aa15.38■□□□□ 0.05
NXF1-216ENST00000533499 BHLHA15Q7RTS1 189 aaPredicted RBP15.38■□□□□ 0.05
NXF1-216ENST00000533499 PARP8Q8N3A8 854 aa15.38■□□□□ 0.05
NXF1-216ENST00000533499 LNX2Q8N448 690 aa15.38■□□□□ 0.05
NXF1-216ENST00000533499 CYB561A3Q8NBI2 242 aa15.38■□□□□ 0.05
NXF1-216ENST00000533499 MCHR2Q969V1 340 aa15.38■□□□□ 0.05
NXF1-216ENST00000533499 FN3KQ9H479 309 aa15.38■□□□□ 0.05
NXF1-216ENST00000533499 USE1Q9NZ43 259 aa15.38■□□□□ 0.05
NXF1-216ENST00000533499 GCN1Q92616 2671 aaKnown RBP15.37■□□□□ 0.05
NXF1-216ENST00000533499 A0A1W2PPL8 197 aa15.37■□□□□ 0.05
NXF1-216ENST00000533499 PRSS37A4D1T9 235 aa15.37■□□□□ 0.05
NXF1-216ENST00000533499 CLEC18AA5D8T8 446 aa15.37■□□□□ 0.05
NXF1-216ENST00000533499 C16orf97H3BN30 126 aa15.37■□□□□ 0.05
NXF1-216ENST00000533499 MGRN1O60291 552 aa15.37■□□□□ 0.05
NXF1-216ENST00000533499 CNOT4O95628 575 aaKnown RBP15.37■□□□□ 0.05
NXF1-216ENST00000533499 ATP6V1G2O95670 118 aa15.37■□□□□ 0.05
NXF1-216ENST00000533499 TXNDC12O95881 172 aa15.37■□□□□ 0.05
NXF1-216ENST00000533499 MPGP29372 298 aa15.37■□□□□ 0.05
NXF1-216ENST00000533499 GRK5P34947 590 aa15.37■□□□□ 0.05
NXF1-216ENST00000533499 POLR2IP36954 125 aaKnown RBP15.37■□□□□ 0.05
NXF1-216ENST00000533499 ZNF84P51523 738 aa15.37■□□□□ 0.05
NXF1-216ENST00000533499 TGFBR3Q03167 851 aa15.37■□□□□ 0.05
NXF1-216ENST00000533499 NPRL3Q12980 569 aa15.37■□□□□ 0.05
NXF1-216ENST00000533499 PTGES3Q15185 160 aaKnown RBP15.37■□□□□ 0.05
NXF1-216ENST00000533499 SFRP5Q5T4F7 317 aa15.37■□□□□ 0.05
NXF1-216ENST00000533499 ACSM5Q6NUN0 579 aa15.37■□□□□ 0.05
NXF1-216ENST00000533499 CLEC18BQ6UXF7 455 aa15.37■□□□□ 0.05
NXF1-216ENST00000533499 ADCK1Q86TW2 530 aa15.37■□□□□ 0.05
NXF1-216ENST00000533499 CLEC18CQ8NCF0 446 aa15.37■□□□□ 0.05
NXF1-216ENST00000533499 ZNF837Q96EG3 531 aaPredicted RBP15.37■□□□□ 0.05
NXF1-216ENST00000533499 ZC3HAV1LQ96H79 300 aaKnown RBP15.37■□□□□ 0.05
NXF1-216ENST00000533499 LRR1Q96L50 414 aa15.37■□□□□ 0.05
NXF1-216ENST00000533499 FOXN4Q96NZ1 517 aa15.37■□□□□ 0.05
NXF1-216ENST00000533499 KCNK17Q96T54 332 aa15.37■□□□□ 0.05
NXF1-216ENST00000533499 MRPL13Q9BYD1 178 aaKnown RBP15.37■□□□□ 0.05
NXF1-216ENST00000533499 SYT4Q9H2B2 425 aa15.37■□□□□ 0.05
NXF1-216ENST00000533499 SRA1Q9HD15 236 aaKnown RBP15.37■□□□□ 0.05
NXF1-216ENST00000533499 TAS2R16Q9NYV7 291 aa15.37■□□□□ 0.05
NXF1-216ENST00000533499 TVP23BQ9NYZ1 205 aa15.37■□□□□ 0.05
NXF1-216ENST00000533499 KLHL21Q9UJP4 597 aa15.37■□□□□ 0.05
NXF1-216ENST00000533499 FOXD3Q9UJU5 478 aaPredicted RBP15.37■□□□□ 0.05
NXF1-216ENST00000533499 DOPEY1Q5JWR5 2465 aa15.37■□□□□ 0.05
NXF1-216ENST00000533499 A0A096LPE4 126 aa15.36■□□□□ 0.05
NXF1-216ENST00000533499 A0A1W2PPZ6 126 aa15.36■□□□□ 0.05
NXF1-216ENST00000533499 SLC22A23A1A5C7 686 aa15.36■□□□□ 0.05
NXF1-216ENST00000533499 C19orf84I3L1E1 186 aa15.36■□□□□ 0.05
NXF1-216ENST00000533499 DHHO43323 396 aa15.36■□□□□ 0.05
NXF1-216ENST00000533499 SLC16A7O60669 478 aa15.36■□□□□ 0.05
NXF1-216ENST00000533499 HMGN1P05114 100 aa15.36■□□□□ 0.05
NXF1-216ENST00000533499 ITGA5P08648 1049 aa15.36■□□□□ 0.05
NXF1-216ENST00000533499 ZNF3P17036 446 aa15.36■□□□□ 0.05
NXF1-216ENST00000533499 EPHA2P29317 976 aa15.36■□□□□ 0.05
NXF1-216ENST00000533499 HOXC12P31275 282 aa15.36■□□□□ 0.05
NXF1-216ENST00000533499 UGT2B10P36537 528 aa15.36■□□□□ 0.05
NXF1-216ENST00000533499 CAPZA2P47755 286 aa15.36■□□□□ 0.05
NXF1-216ENST00000533499 DBPQ10586 325 aaPredicted RBP15.36■□□□□ 0.05
NXF1-216ENST00000533499 SNAPC1Q16533 368 aa15.36■□□□□ 0.05
NXF1-216ENST00000533499 LRFN4Q6PJG9 635 aa15.36■□□□□ 0.05
NXF1-216ENST00000533499 STAC2Q6ZMT1 411 aa15.36■□□□□ 0.05
NXF1-216ENST00000533499 ZNF433Q8N7K0 673 aaPredicted RBP15.36■□□□□ 0.05
NXF1-216ENST00000533499 HTRA1Q92743 480 aa15.36■□□□□ 0.05
NXF1-216ENST00000533499 SLC38A2Q96QD8 506 aa15.36■□□□□ 0.05
NXF1-216ENST00000533499 VCXQ9H320 206 aa15.36■□□□□ 0.05
NXF1-216ENST00000533499 TOR3AQ9H497 397 aa15.36■□□□□ 0.05
NXF1-216ENST00000533499 SEC61A2Q9H9S3 476 aa15.36■□□□□ 0.05
NXF1-216ENST00000533499 RPRD1BQ9NQG5 326 aaKnown RBP15.36■□□□□ 0.05
NXF1-216ENST00000533499 TENM4Q6N022 2769 aa15.36■□□□□ 0.05
NXF1-216ENST00000533499 HCFC1P51610 2035 aa15.36■□□□□ 0.05
NXF1-216ENST00000533499 DOPEY2Q9Y3R5 2298 aa15.35■□□□□ 0.05
NXF1-216ENST00000533499 A0A1W2PR80 420 aa15.35■□□□□ 0.05
NXF1-216ENST00000533499 CENPBD1B2RD01 187 aa15.35■□□□□ 0.05
NXF1-216ENST00000533499 SNAP29O95721 258 aa15.35■□□□□ 0.05
NXF1-216ENST00000533499 B4GALT1P15291 398 aa15.35■□□□□ 0.05
NXF1-216ENST00000533499 GUCA1AP43080 201 aaPredicted RBP15.35■□□□□ 0.05
NXF1-216ENST00000533499 CDK5Q00535 292 aa15.35■□□□□ 0.05
NXF1-216ENST00000533499 CRMP1Q14194 572 aa15.35■□□□□ 0.05
NXF1-216ENST00000533499 SGCAQ16586 387 aa15.35■□□□□ 0.05
NXF1-216ENST00000533499 FBXL19-AS1Q494R0 122 aa15.35■□□□□ 0.05
NXF1-216ENST00000533499 THEM4Q5T1C6 240 aa15.35■□□□□ 0.05
NXF1-216ENST00000533499 ZNF813Q6ZN06 617 aa15.35■□□□□ 0.05
NXF1-216ENST00000533499 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.35■□□□□ 0.05
NXF1-216ENST00000533499 SLC37A3Q8NCC5 494 aa15.35■□□□□ 0.05
NXF1-216ENST00000533499 STEAP2Q8NFT2 490 aa15.35■□□□□ 0.05
NXF1-216ENST00000533499 OR9Q1Q8NGQ5 310 aa15.35■□□□□ 0.05
NXF1-216ENST00000533499 LINC01560Q8TB33 94 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms