RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 MSI2Q96DH6 328 aaKnown RBP9.94□□□□□ -0.82
TRAPPC4-213ENST00000533149 BPIFA2Q96DR5 249 aa9.94□□□□□ -0.82
TRAPPC4-213ENST00000533149 SGTBQ96EQ0 304 aa9.94□□□□□ -0.82
TRAPPC4-213ENST00000533149 GABARAPL3Q9BY60 117 aa9.94□□□□□ -0.82
TRAPPC4-213ENST00000533149 SLC19A3Q9BZV2 496 aa9.94□□□□□ -0.82
TRAPPC4-213ENST00000533149 VDAC3Q9Y277 283 aa9.94□□□□□ -0.82
TRAPPC4-213ENST00000533149 TMEM5Q9Y2B1 443 aa9.94□□□□□ -0.82
TRAPPC4-213ENST00000533149 ZNF337Q9Y3M9 751 aa9.94□□□□□ -0.82
TRAPPC4-213ENST00000533149 A0A087WZY1 265 aa9.93□□□□□ -0.82
TRAPPC4-213ENST00000533149 TMEM72A0PK05 275 aa9.93□□□□□ -0.82
TRAPPC4-213ENST00000533149 HTR3EA5X5Y0 456 aa9.93□□□□□ -0.82
TRAPPC4-213ENST00000533149 EFCAB9A8MZ26 197 aa9.93□□□□□ -0.82
TRAPPC4-213ENST00000533149 SHISA8B8ZZ34 492 aa9.93□□□□□ -0.82
TRAPPC4-213ENST00000533149 E9PQ18 207 aa9.93□□□□□ -0.82
TRAPPC4-213ENST00000533149 H3BML4 177 aa9.93□□□□□ -0.82
TRAPPC4-213ENST00000533149 EFNA2O43921 213 aa9.93□□□□□ -0.82
TRAPPC4-213ENST00000533149 CLIC3O95833 236 aa9.93□□□□□ -0.82
TRAPPC4-213ENST00000533149 GNAO1P09471 354 aa9.93□□□□□ -0.82
TRAPPC4-213ENST00000533149 HK1P19367 917 aa9.93□□□□□ -0.82
TRAPPC4-213ENST00000533149 IL32P24001 234 aa9.93□□□□□ -0.82
TRAPPC4-213ENST00000533149 POU1F1P28069 291 aa9.93□□□□□ -0.82
TRAPPC4-213ENST00000533149 APOBEC1P41238 236 aaKnown RBP9.93□□□□□ -0.82
TRAPPC4-213ENST00000533149 GPR4P46093 362 aa9.93□□□□□ -0.82
TRAPPC4-213ENST00000533149 CLDN20P56880 219 aa9.93□□□□□ -0.82
TRAPPC4-213ENST00000533149 ACTG1P63261 375 aa9.93□□□□□ -0.82
TRAPPC4-213ENST00000533149 FOXF1Q12946 379 aa9.93□□□□□ -0.82
TRAPPC4-213ENST00000533149 MED21Q13503 144 aa9.93□□□□□ -0.82
TRAPPC4-213ENST00000533149 TAB1Q15750 504 aa9.93□□□□□ -0.82
TRAPPC4-213ENST00000533149 CR1LQ2VPA4 569 aa9.93□□□□□ -0.82
TRAPPC4-213ENST00000533149 PRR31Q5SQ13 230 aa9.93□□□□□ -0.82
TRAPPC4-213ENST00000533149 RASSF6Q6ZTQ3 369 aa9.93□□□□□ -0.82
TRAPPC4-213ENST00000533149 USP51Q70EK9 711 aa9.93□□□□□ -0.82
TRAPPC4-213ENST00000533149 RADILQ96JH8 1075 aa9.93□□□□□ -0.82
TRAPPC4-213ENST00000533149 MRGPRX4Q96LA9 322 aa9.93□□□□□ -0.82
TRAPPC4-213ENST00000533149 CNBD2Q96M20 576 aa9.93□□□□□ -0.82
TRAPPC4-213ENST00000533149 CBLN4Q9NTU7 201 aa9.93□□□□□ -0.82
TRAPPC4-213ENST00000533149 ENOPH1Q9UHY7 261 aa9.93□□□□□ -0.82
TRAPPC4-213ENST00000533149 ZNF281Q9Y2X9 895 aa9.93□□□□□ -0.82
TRAPPC4-213ENST00000533149 BOLA1Q9Y3E2 137 aa9.93□□□□□ -0.82
TRAPPC4-213ENST00000533149 DPRXA6NFQ7 191 aa9.92□□□□□ -0.82
TRAPPC4-213ENST00000533149 A8MVM7 634 aa9.92□□□□□ -0.82
TRAPPC4-213ENST00000533149 CDC42EP2O14613 210 aa9.92□□□□□ -0.82
TRAPPC4-213ENST00000533149 RAMP1O60894 148 aa9.92□□□□□ -0.82
TRAPPC4-213ENST00000533149 PTP4A3O75365 173 aa9.92□□□□□ -0.82
TRAPPC4-213ENST00000533149 OR7A10O76100 309 aa9.92□□□□□ -0.82
TRAPPC4-213ENST00000533149 SOX14O95416 240 aa9.92□□□□□ -0.82
TRAPPC4-213ENST00000533149 CH25HO95992 272 aa9.92□□□□□ -0.82
TRAPPC4-213ENST00000533149 TGFAP01135 160 aa9.92□□□□□ -0.82
TRAPPC4-213ENST00000533149 APEHP13798 732 aaKnown RBP9.92□□□□□ -0.82
TRAPPC4-213ENST00000533149 FUT1P19526 365 aa9.92□□□□□ -0.82
TRAPPC4-213ENST00000533149 SRP14P37108 136 aaKnown RBP9.92□□□□□ -0.82
TRAPPC4-213ENST00000533149 EIF1P41567 113 aaKnown RBP9.92□□□□□ -0.82
TRAPPC4-213ENST00000533149 CDH11P55287 796 aa9.92□□□□□ -0.82
TRAPPC4-213ENST00000533149 DEFA6Q01524 100 aa9.92□□□□□ -0.82
TRAPPC4-213ENST00000533149 EGR4Q05215 589 aa9.92□□□□□ -0.82
TRAPPC4-213ENST00000533149 PTGES3Q15185 160 aaKnown RBP9.92□□□□□ -0.82
TRAPPC4-213ENST00000533149 C10orf53Q8N6V4 93 aa9.92□□□□□ -0.82
TRAPPC4-213ENST00000533149 ATP6V1C2Q8NEY4 427 aa9.92□□□□□ -0.82
TRAPPC4-213ENST00000533149 OR5M1Q8NGP8 315 aa9.92□□□□□ -0.82
TRAPPC4-213ENST00000533149 STK35Q8TDR2 534 aa9.92□□□□□ -0.82
TRAPPC4-213ENST00000533149 KTI12Q96EK9 354 aaPredicted RBP9.92□□□□□ -0.82
TRAPPC4-213ENST00000533149 MUS81Q96NY9 551 aa9.92□□□□□ -0.82
TRAPPC4-213ENST00000533149 ANKRD60Q9BZ19 345 aa9.92□□□□□ -0.82
TRAPPC4-213ENST00000533149 EGLN3Q9H6Z9 239 aa9.92□□□□□ -0.82
TRAPPC4-213ENST00000533149 SERINC1Q9NRX5 453 aa9.92□□□□□ -0.82
TRAPPC4-213ENST00000533149 PAQR5Q9NXK6 330 aaPredicted RBP9.92□□□□□ -0.82
TRAPPC4-213ENST00000533149 MCTS1Q9ULC4 181 aaKnown RBP9.92□□□□□ -0.82
TRAPPC4-213ENST00000533149 CLEC4AQ9UMR7 237 aa9.92□□□□□ -0.82
TRAPPC4-213ENST00000533149 LRCH1Q9Y2L9 728 aa9.92□□□□□ -0.82
TRAPPC4-213ENST00000533149 GMPPBQ9Y5P6 360 aa9.92□□□□□ -0.82
TRAPPC4-213ENST00000533149 MALRD1Q5VYJ5 2156 aa9.92□□□□□ -0.82
TRAPPC4-213ENST00000533149 MGAM2Q2M2H8 2515 aa9.91□□□□□ -0.82
TRAPPC4-213ENST00000533149 TRAV36DV7A0A075B6V5 113 aa9.91□□□□□ -0.82
TRAPPC4-213ENST00000533149 ZC3H12DA2A288 527 aaKnown RBP9.91□□□□□ -0.82
TRAPPC4-213ENST00000533149 SHISA9B4DS77 424 aa9.91□□□□□ -0.82
TRAPPC4-213ENST00000533149 LRRN3E7EW58 273 aa9.91□□□□□ -0.82
TRAPPC4-213ENST00000533149 H3BN98 237 aa9.91□□□□□ -0.82
TRAPPC4-213ENST00000533149 H7C417 338 aa9.91□□□□□ -0.82
TRAPPC4-213ENST00000533149 NDUFS8O00217 210 aa9.91□□□□□ -0.82
TRAPPC4-213ENST00000533149 ZNF208O43345 1280 aa9.91□□□□□ -0.82
TRAPPC4-213ENST00000533149 NPIPB7O75200 414 aa9.91□□□□□ -0.82
TRAPPC4-213ENST00000533149 IGF2P01344 180 aa9.91□□□□□ -0.82
TRAPPC4-213ENST00000533149 SAGP10523 405 aaPredicted RBP9.91□□□□□ -0.82
TRAPPC4-213ENST00000533149 BMP4P12644 408 aa9.91□□□□□ -0.82
TRAPPC4-213ENST00000533149 MYF6P23409 242 aa9.91□□□□□ -0.82
TRAPPC4-213ENST00000533149 TTKP33981 857 aa9.91□□□□□ -0.82
TRAPPC4-213ENST00000533149 GGT2P36268 569 aa9.91□□□□□ -0.82
TRAPPC4-213ENST00000533149 GIPRP48546 466 aa9.91□□□□□ -0.82
TRAPPC4-213ENST00000533149 EFNA4P52798 201 aa9.91□□□□□ -0.82
TRAPPC4-213ENST00000533149 GGTLC2Q14390 218 aa9.91□□□□□ -0.82
TRAPPC4-213ENST00000533149 GINS1Q14691 196 aa9.91□□□□□ -0.82
TRAPPC4-213ENST00000533149 PDK3Q15120 406 aa9.91□□□□□ -0.82
TRAPPC4-213ENST00000533149 GLYR1Q49A26 553 aaPredicted RBP9.91□□□□□ -0.82
TRAPPC4-213ENST00000533149 SFRP5Q5T4F7 317 aa9.91□□□□□ -0.82
TRAPPC4-213ENST00000533149 C1orf140Q5VVS0 124 aa9.91□□□□□ -0.82
TRAPPC4-213ENST00000533149 TMEM236Q5W0B7 351 aa9.91□□□□□ -0.82
TRAPPC4-213ENST00000533149 GTF2IRD2BQ6EKJ0 949 aa9.91□□□□□ -0.82
TRAPPC4-213ENST00000533149 C11orf71Q6IPW1 123 aa9.91□□□□□ -0.82
TRAPPC4-213ENST00000533149 SSX8Q7RTT4 187 aa9.91□□□□□ -0.82
TRAPPC4-213ENST00000533149 SLC46A3Q7Z3Q1 461 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms