RNA–Protein interactions for RNA: ENST00000533001.1

KNL1-211, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 5,923 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-211ENST00000533001 LRRC34Q8IZ02 419 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 EID3Q8N140 333 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 POMGNT2Q8NAT1 580 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 RAB40AQ8WXH6 277 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 TAMM41Q96BW9 452 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 ROPN1LQ96C74 230 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 TRIM44Q96DX7 344 aaPredicted RBP1.31□□□□□ -2.2
KNL1-211ENST00000533001 ZNF830Q96NB3 372 aaPredicted RBP1.31□□□□□ -2.2
KNL1-211ENST00000533001 CPNE1Q99829 537 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 SLC39A3Q9BRY0 314 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 YIPF4Q9BSR8 244 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 HCAR1Q9BXC0 346 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 BARX1Q9HBU1 254 aaPredicted RBP1.31□□□□□ -2.2
KNL1-211ENST00000533001 BRD7Q9NPI1 651 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 NRIP3Q9NQ35 241 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 TAS2R9Q9NYW1 312 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 KLHL9Q9P2J3 617 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 FBXO9Q9UK97 447 aaPredicted RBP1.31□□□□□ -2.2
KNL1-211ENST00000533001 A0A1B0GTI1 187 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 GOLGA6L10A6NI86 522 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 GOLGA6L19H0YKK7 550 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 RNASET2O00584 256 aaKnown RBP1.31□□□□□ -2.2
KNL1-211ENST00000533001 ABHD16AO95870 558 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 PRPS2P11908 318 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 ATP6V1B1P15313 513 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 IGLL1P15814 213 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 NPR2P20594 1047 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 SAT1P21673 171 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 THBS3P49746 956 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 CDH12P55289 794 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 BRWD1-AS2P59051 145 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 PAX5Q02548 391 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 RAB35Q15286 201 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 AP5B1Q2VPB7 878 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 KRTAP5-4Q6L8H1 288 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 ACSM5Q6NUN0 579 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 C11orf88Q6PI97 169 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 ADCK2Q7Z695 626 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 ZNF420Q8TAQ5 688 aaPredicted RBP1.31□□□□□ -2.2
KNL1-211ENST00000533001 POP5Q969H6 163 aaKnown RBP1.31□□□□□ -2.2
KNL1-211ENST00000533001 KLHL29Q96CT2 875 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 ZNF347Q96SE7 839 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 KAT8Q9H7Z6 458 aaKnown RBP1.31□□□□□ -2.2
KNL1-211ENST00000533001 AIG1Q9NVV5 245 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 NECAP2Q9NVZ3 263 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 MRPL39Q9NYK5 338 aaKnown RBP1.31□□□□□ -2.2
KNL1-211ENST00000533001 ASH2LQ9UBL3 628 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 CYB5R1Q9UHQ9 305 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 LGALS13Q9UHV8 139 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 IGHV1-69DA0A0B4J2H0 117 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 MSGN1A6NI15 193 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 H0Y3Z8 333 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 EIF3HO15372 352 aaKnown RBP eCLIP1.31□□□□□ -2.2
KNL1-211ENST00000533001 CLOCKO15516 846 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 NDUFB5O43674 189 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 PSPNO60542 156 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 CCNT2O60583 730 aaKnown RBP1.31□□□□□ -2.2
KNL1-211ENST00000533001 IGHV1-69P01742 117 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 FAHP16930 419 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 MSX2P35548 267 aaPredicted RBP1.31□□□□□ -2.2
KNL1-211ENST00000533001 GIPRP48546 466 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 STX5Q13190 355 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 TMED2Q15363 201 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 C9orf135Q5VTT2 229 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 ZNF626Q68DY1 528 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 OR7E24Q6IFN5 339 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 ZNF529Q6P280 563 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 KLHL24Q6TFL4 600 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 OVCH2Q7RTZ1 564 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 PPM1NQ8N819 430 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 SLC25A28Q96A46 364 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 EXOSC8Q96B26 276 aaKnown RBP1.31□□□□□ -2.2
KNL1-211ENST00000533001 TRNT1Q96Q11 434 aaKnown RBP1.31□□□□□ -2.2
KNL1-211ENST00000533001 CPPED1Q9BRF8 314 aaPredicted RBP1.31□□□□□ -2.2
KNL1-211ENST00000533001 CAPS2Q9BXY5 557 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 SP140LQ9H930 580 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 MYOZ1Q9NP98 299 aaPredicted RBP1.31□□□□□ -2.2
KNL1-211ENST00000533001 OR10H1Q9Y4A9 318 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 ANKDD1BA6NHY2 528 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 IQCF6A8MYZ5 107 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 DVL1O14640 695 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 GLRA3O75311 464 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 IGLV1-40P01703 118 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 ABHD2P08910 425 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 SAGP10523 405 aaPredicted RBP1.31□□□□□ -2.2
KNL1-211ENST00000533001 B4GALT1P15291 398 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 STMN1P16949 149 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 APOBEC1P41238 236 aaKnown RBP1.31□□□□□ -2.2
KNL1-211ENST00000533001 PDLIM4P50479 330 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 LCN2P80188 198 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 MYBPC1Q00872 1141 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 RAB39AQ14964 217 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 SNAI3Q3KNW1 292 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 AVPI1Q5T686 147 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 RAET1LQ5VY80 246 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 KLBQ86Z14 1044 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 ZNF485Q8NCK3 441 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 CLHC1Q8NHS4 586 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 RPS4Y2Q8TD47 263 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 STK35Q8TDR2 534 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms