RNA–Protein interactions for RNA: ENST00000532893.5

CDC27-209, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-209ENST00000532893 PKNOX2Q96KN3 472 aa12.22□□□□□ -0.45
CDC27-209ENST00000532893 ASPNQ9BXN1 380 aa12.22□□□□□ -0.45
CDC27-209ENST00000532893 NUF2Q9BZD4 464 aa12.22□□□□□ -0.45
CDC27-209ENST00000532893 C20orf27Q9GZN8 174 aa12.22□□□□□ -0.45
CDC27-209ENST00000532893 PDP1Q9P0J1 537 aaPredicted RBP12.22□□□□□ -0.45
CDC27-209ENST00000532893 WDR91A4D1P6 747 aa12.21□□□□□ -0.45
CDC27-209ENST00000532893 TMEM247A6NEH6 219 aa12.21□□□□□ -0.45
CDC27-209ENST00000532893 CLDN34H7C241 214 aa12.21□□□□□ -0.45
CDC27-209ENST00000532893 SPRY3O43610 288 aa12.21□□□□□ -0.45
CDC27-209ENST00000532893 IGHV1-46P01743 117 aa12.21□□□□□ -0.45
CDC27-209ENST00000532893 IGHV3-13P01766 116 aa12.21□□□□□ -0.45
CDC27-209ENST00000532893 ALDOCP09972 364 aaKnown RBP12.21□□□□□ -0.45
CDC27-209ENST00000532893 SBK2P0C263 348 aa12.21□□□□□ -0.45
CDC27-209ENST00000532893 HTR2AP28223 471 aa12.21□□□□□ -0.45
CDC27-209ENST00000532893 RPL14P50914 215 aaKnown RBP12.21□□□□□ -0.45
CDC27-209ENST00000532893 BIDP55957 195 aa12.21□□□□□ -0.45
CDC27-209ENST00000532893 ABCE1P61221 599 aaKnown RBP12.21□□□□□ -0.45
CDC27-209ENST00000532893 LRRC74AQ0VAA2 488 aa12.21□□□□□ -0.45
CDC27-209ENST00000532893 HNRNPA0Q13151 305 aaKnown RBP12.21□□□□□ -0.45
CDC27-209ENST00000532893 TBC1D28Q2M2D7 210 aa12.21□□□□□ -0.45
CDC27-209ENST00000532893 ALG10BQ5I7T1 473 aa12.21□□□□□ -0.45
CDC27-209ENST00000532893 HIST2H2BDQ6DRA6 164 aa12.21□□□□□ -0.45
CDC27-209ENST00000532893 TMEM53Q6P2H8 277 aa12.21□□□□□ -0.45
CDC27-209ENST00000532893 JAZF1Q86VZ6 243 aa12.21□□□□□ -0.45
CDC27-209ENST00000532893 C10orf53Q8N6V4 93 aa12.21□□□□□ -0.45
CDC27-209ENST00000532893 LSMEM1Q8N8F7 131 aa12.21□□□□□ -0.45
CDC27-209ENST00000532893 SCAIQ8N9R8 606 aa12.21□□□□□ -0.45
CDC27-209ENST00000532893 DNAJA4Q8WW22 397 aaPredicted RBP12.21□□□□□ -0.45
CDC27-209ENST00000532893 SLC35B4Q969S0 331 aa12.21□□□□□ -0.45
CDC27-209ENST00000532893 MOGAT1Q96PD6 335 aa12.21□□□□□ -0.45
CDC27-209ENST00000532893 BCL2L14Q9BZR8 327 aa12.21□□□□□ -0.45
CDC27-209ENST00000532893 MS4A7Q9GZW8 240 aaPredicted RBP12.21□□□□□ -0.45
CDC27-209ENST00000532893 TPT1P8Q9HAU6 139 aa12.21□□□□□ -0.45
CDC27-209ENST00000532893 GLTPQ9NZD2 209 aa12.21□□□□□ -0.45
CDC27-209ENST00000532893 ZNF281Q9Y2X9 895 aa12.21□□□□□ -0.45
CDC27-209ENST00000532893 RAP2CQ9Y3L5 183 aa12.21□□□□□ -0.45
CDC27-209ENST00000532893 SOX21Q9Y651 276 aaPredicted RBP12.21□□□□□ -0.45
CDC27-209ENST00000532893 LRRN3E7EW58 273 aa12.2□□□□□ -0.46
CDC27-209ENST00000532893 C11orf98E9PRG8 122 aa12.2□□□□□ -0.46
CDC27-209ENST00000532893 PLPP3O14495 311 aa12.2□□□□□ -0.46
CDC27-209ENST00000532893 UBOX5O94941 541 aa12.2□□□□□ -0.46
CDC27-209ENST00000532893 GPANK1O95872 356 aa12.2□□□□□ -0.46
CDC27-209ENST00000532893 SLC3A1Q07837 685 aa12.2□□□□□ -0.46
CDC27-209ENST00000532893 PDCD4Q53EL6 469 aaKnown RBP12.2□□□□□ -0.46
CDC27-209ENST00000532893 FAM209AQ5JX71 171 aa12.2□□□□□ -0.46
CDC27-209ENST00000532893 C16orf87Q6PH81 154 aa12.2□□□□□ -0.46
CDC27-209ENST00000532893 LRFN4Q6PJG9 635 aa12.2□□□□□ -0.46
CDC27-209ENST00000532893 SPATC1Q76KD6 591 aa12.2□□□□□ -0.46
CDC27-209ENST00000532893 PXKQ7Z7A4 578 aa12.2□□□□□ -0.46
CDC27-209ENST00000532893 OR1J2Q8NGS2 313 aa12.2□□□□□ -0.46
CDC27-209ENST00000532893 OR1J1Q8NGS3 322 aa12.2□□□□□ -0.46
CDC27-209ENST00000532893 OR6S1Q8NH40 331 aa12.2□□□□□ -0.46
CDC27-209ENST00000532893 TMEM54Q969K7 222 aa12.2□□□□□ -0.46
CDC27-209ENST00000532893 TRIM44Q96DX7 344 aaPredicted RBP12.2□□□□□ -0.46
CDC27-209ENST00000532893 CCT8L2Q96SF2 557 aa12.2□□□□□ -0.46
CDC27-209ENST00000532893 ZBTB18Q99592 522 aa12.2□□□□□ -0.46
CDC27-209ENST00000532893 PKP2Q99959 881 aa12.2□□□□□ -0.46
CDC27-209ENST00000532893 RSPO3Q9BXY4 272 aaPredicted RBP12.2□□□□□ -0.46
CDC27-209ENST00000532893 LRMDAQ9H2I8 198 aa12.2□□□□□ -0.46
CDC27-209ENST00000532893 NPHS2Q9NP85 383 aa12.2□□□□□ -0.46
CDC27-209ENST00000532893 TCF7L2Q9NQB0 619 aa12.2□□□□□ -0.46
CDC27-209ENST00000532893 TMEM38BQ9NVV0 291 aa12.2□□□□□ -0.46
CDC27-209ENST00000532893 AIG1Q9NVV5 245 aa12.2□□□□□ -0.46
CDC27-209ENST00000532893 MRPL39Q9NYK5 338 aaKnown RBP12.2□□□□□ -0.46
CDC27-209ENST00000532893 EGFL7Q9UHF1 273 aa12.2□□□□□ -0.46
CDC27-209ENST00000532893 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.2□□□□□ -0.46
CDC27-209ENST00000532893 IGHV3OR16-10A0A075B7F0 116 aa12.19□□□□□ -0.46
CDC27-209ENST00000532893 ENTPD5O75356 428 aa12.19□□□□□ -0.46
CDC27-209ENST00000532893 FARS2O95363 451 aaKnown RBP12.19□□□□□ -0.46
CDC27-209ENST00000532893 ANP32DO95626 131 aa12.19□□□□□ -0.46
CDC27-209ENST00000532893 SNAP29O95721 258 aa12.19□□□□□ -0.46
CDC27-209ENST00000532893 KNG1P01042 644 aa12.19□□□□□ -0.46
CDC27-209ENST00000532893 PTHP01270 115 aa12.19□□□□□ -0.46
CDC27-209ENST00000532893 SERPINE1P05121 402 aa12.19□□□□□ -0.46
CDC27-209ENST00000532893 ZNF12P17014 697 aa12.19□□□□□ -0.46
CDC27-209ENST00000532893 RBMXP38159 391 aaKnown RBP12.19□□□□□ -0.46
CDC27-209ENST00000532893 ETV4P43268 484 aa12.19□□□□□ -0.46
CDC27-209ENST00000532893 GTDC1Q4AE62 458 aa12.19□□□□□ -0.46
CDC27-209ENST00000532893 SPATA46Q5T0L3 261 aa12.19□□□□□ -0.46
CDC27-209ENST00000532893 OGFOD2Q6N063 350 aa12.19□□□□□ -0.46
CDC27-209ENST00000532893 ULK3Q6PHR2 472 aa12.19□□□□□ -0.46
CDC27-209ENST00000532893 COMTD1Q86VU5 262 aa12.19□□□□□ -0.46
CDC27-209ENST00000532893 KIR3DL3Q8N743 410 aa12.19□□□□□ -0.46
CDC27-209ENST00000532893 OR4K5Q8NGD3 323 aa12.19□□□□□ -0.46
CDC27-209ENST00000532893 MAL2Q969L2 176 aa12.19□□□□□ -0.46
CDC27-209ENST00000532893 SLC47A1Q96FL8 570 aa12.19□□□□□ -0.46
CDC27-209ENST00000532893 DCLRE1CQ96SD1 692 aaKnown RBP12.19□□□□□ -0.46
CDC27-209ENST00000532893 SORT1Q99523 831 aa12.19□□□□□ -0.46
CDC27-209ENST00000532893 EPYCQ99645 322 aa12.19□□□□□ -0.46
CDC27-209ENST00000532893 MRI1Q9BV20 369 aa12.19□□□□□ -0.46
CDC27-209ENST00000532893 C1orf198Q9H425 327 aa12.19□□□□□ -0.46
CDC27-209ENST00000532893 MEAF6Q9HAF1 191 aa12.19□□□□□ -0.46
CDC27-209ENST00000532893 DCAF16Q9NXF7 216 aa12.19□□□□□ -0.46
CDC27-209ENST00000532893 THUMPD1Q9NXG2 353 aaKnown RBP12.19□□□□□ -0.46
CDC27-209ENST00000532893 SELENONQ9NZV5 590 aa12.19□□□□□ -0.46
CDC27-209ENST00000532893 TESQ9UGI8 421 aaKnown RBP12.19□□□□□ -0.46
CDC27-209ENST00000532893 MMP24Q9Y5R2 645 aa12.19□□□□□ -0.46
CDC27-209ENST00000532893 INSIG2Q9Y5U4 225 aa12.19□□□□□ -0.46
CDC27-209ENST00000532893 NPTNQ9Y639 398 aa12.19□□□□□ -0.46
CDC27-209ENST00000532893 IQCMA0A1B0GVH7 501 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms