RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 PRPS1P60891 318 aa2.08□□□□□ -2.08
CD44-234ENST00000531873 ACTA2P62736 377 aa2.08□□□□□ -2.08
CD44-234ENST00000531873 ACTG2P63267 376 aa2.08□□□□□ -2.08
CD44-234ENST00000531873 ACTC1P68032 377 aa2.08□□□□□ -2.08
CD44-234ENST00000531873 ACTA1P68133 377 aa2.08□□□□□ -2.08
CD44-234ENST00000531873 DAZ2Q13117 558 aaKnown RBP2.08□□□□□ -2.08
CD44-234ENST00000531873 ARFRP1Q13795 201 aa2.08□□□□□ -2.08
CD44-234ENST00000531873 FZD2Q14332 565 aa2.08□□□□□ -2.08
CD44-234ENST00000531873 NSDHLQ15738 373 aa2.08□□□□□ -2.08
CD44-234ENST00000531873 SLC1A5Q15758 541 aa2.08□□□□□ -2.08
CD44-234ENST00000531873 NRF1Q16656 503 aa2.08□□□□□ -2.08
CD44-234ENST00000531873 HIKESHIQ53FT3 197 aa2.08□□□□□ -2.08
CD44-234ENST00000531873 ANKRD26P1Q6NSI1 321 aa2.08□□□□□ -2.08
CD44-234ENST00000531873 RNF165Q6ZSG1 346 aa2.08□□□□□ -2.08
CD44-234ENST00000531873 OTUD6AQ7L8S5 288 aa2.08□□□□□ -2.08
CD44-234ENST00000531873 SSX9Q7RTT3 188 aa2.08□□□□□ -2.08
CD44-234ENST00000531873 MMAAQ8IVH4 418 aaKnown RBP2.08□□□□□ -2.08
CD44-234ENST00000531873 ZBED8Q8IZ13 594 aa2.08□□□□□ -2.08
CD44-234ENST00000531873 ZNF321PQ8N8H1 164 aa2.08□□□□□ -2.08
CD44-234ENST00000531873 LINC01006Q8NI28 216 aa2.08□□□□□ -2.08
CD44-234ENST00000531873 RHEBL1Q8TAI7 183 aa2.08□□□□□ -2.08
CD44-234ENST00000531873 SLC7A13Q8TCU3 470 aa2.08□□□□□ -2.08
CD44-234ENST00000531873 GLYATL2Q8WU03 294 aa2.08□□□□□ -2.08
CD44-234ENST00000531873 FAM151AQ8WW52 585 aa2.08□□□□□ -2.08
CD44-234ENST00000531873 CAPSLQ8WWF8 208 aa2.08□□□□□ -2.08
CD44-234ENST00000531873 UCN3Q969E3 161 aa2.08□□□□□ -2.08
CD44-234ENST00000531873 MARC2Q969Z3 335 aa2.08□□□□□ -2.08
CD44-234ENST00000531873 ISG20Q96AZ6 181 aaKnown RBP2.08□□□□□ -2.08
CD44-234ENST00000531873 SGK3Q96BR1 496 aa2.08□□□□□ -2.08
CD44-234ENST00000531873 C8orf44Q96CB5 159 aa2.08□□□□□ -2.08
CD44-234ENST00000531873 PKNOX2Q96KN3 472 aa2.08□□□□□ -2.08
CD44-234ENST00000531873 ANKRD60Q9BZ19 345 aa2.08□□□□□ -2.08
CD44-234ENST00000531873 OR11A1Q9GZK7 315 aa2.08□□□□□ -2.08
CD44-234ENST00000531873 NXF3Q9H4D5 531 aaKnown RBP2.08□□□□□ -2.08
CD44-234ENST00000531873 CYP3A43Q9HB55 503 aa2.08□□□□□ -2.08
CD44-234ENST00000531873 PLGRKTQ9HBL7 147 aa2.08□□□□□ -2.08
CD44-234ENST00000531873 EML4Q9HC35 981 aaKnown RBP2.08□□□□□ -2.08
CD44-234ENST00000531873 DAZ3Q9NR90 486 aaKnown RBP2.08□□□□□ -2.08
CD44-234ENST00000531873 C20orf96Q9NUD7 363 aaPredicted RBP2.08□□□□□ -2.08
CD44-234ENST00000531873 EXD2Q9NVH0 621 aa2.08□□□□□ -2.08
CD44-234ENST00000531873 SLC25A15Q9Y619 301 aa2.08□□□□□ -2.08
CD44-234ENST00000531873 KIF25-AS1Q9Y6Z4 181 aa2.08□□□□□ -2.08
CD44-234ENST00000531873 MSH6P52701 1360 aa2.08□□□□□ -2.08
CD44-234ENST00000531873 TNRQ92752 1358 aa2.08□□□□□ -2.08
CD44-234ENST00000531873 PLEKHG1Q9ULL1 1385 aa2.08□□□□□ -2.08
CD44-234ENST00000531873 ATRXP46100 2492 aa2.08□□□□□ -2.08
CD44-234ENST00000531873 KCNE1BA0A087WTH5 132 aa2.07□□□□□ -2.08
CD44-234ENST00000531873 GLYATL1P3A0A0U1RQE8 302 aa2.07□□□□□ -2.08
CD44-234ENST00000531873 KBTBD11-OT1A0A1B0GTJ5 212 aa2.07□□□□□ -2.08
CD44-234ENST00000531873 A0A1B0GVI7 797 aa2.07□□□□□ -2.08
CD44-234ENST00000531873 USP27XA6NNY8 438 aa2.07□□□□□ -2.08
CD44-234ENST00000531873 F6UB75 175 aa2.07□□□□□ -2.08
CD44-234ENST00000531873 H0YC42 278 aa2.07□□□□□ -2.08
CD44-234ENST00000531873 BOLA2-SMG1P6H3BVE0 249 aa2.07□□□□□ -2.08
CD44-234ENST00000531873 EIF4E2O60573 245 aaKnown RBP2.07□□□□□ -2.08
CD44-234ENST00000531873 HUS1O60921 280 aa2.07□□□□□ -2.08
CD44-234ENST00000531873 TNFSF13O75888 250 aa2.07□□□□□ -2.08
CD44-234ENST00000531873 ALDOBP05062 364 aa2.07□□□□□ -2.08
CD44-234ENST00000531873 SERPINA5P05154 406 aa2.07□□□□□ -2.08
CD44-234ENST00000531873 GKN3PP0CG01 181 aa2.07□□□□□ -2.08
CD44-234ENST00000531873 HTR1EP28566 365 aa2.07□□□□□ -2.08
CD44-234ENST00000531873 CD1BP29016 333 aa2.07□□□□□ -2.08
CD44-234ENST00000531873 FOXN2P32314 431 aa2.07□□□□□ -2.08
CD44-234ENST00000531873 CCT6AP40227 531 aaKnown RBP2.07□□□□□ -2.08
CD44-234ENST00000531873 CTRLP40313 264 aa2.07□□□□□ -2.08
CD44-234ENST00000531873 PEX19P40855 299 aa2.07□□□□□ -2.08
CD44-234ENST00000531873 MAGEA1P43355 309 aa2.07□□□□□ -2.08
CD44-234ENST00000531873 MRPL19P49406 292 aaKnown RBP2.07□□□□□ -2.08
CD44-234ENST00000531873 GNB2P62879 340 aa2.07□□□□□ -2.08
CD44-234ENST00000531873 SLC25A11Q02978 314 aaKnown RBP2.07□□□□□ -2.08
CD44-234ENST00000531873 IL17AQ16552 155 aa2.07□□□□□ -2.08
CD44-234ENST00000531873 HADHQ16836 314 aaKnown RBP2.07□□□□□ -2.08
CD44-234ENST00000531873 KCTD19Q17RG1 926 aaPredicted RBP2.07□□□□□ -2.08
CD44-234ENST00000531873 SPECC1LQ69YQ0 1117 aa2.07□□□□□ -2.08
CD44-234ENST00000531873 TWF2Q6IBS0 349 aaKnown RBP2.07□□□□□ -2.08
CD44-234ENST00000531873 LCN12Q6JVE5 192 aa2.07□□□□□ -2.08
CD44-234ENST00000531873 ACP7Q6ZNF0 438 aa2.07□□□□□ -2.08
CD44-234ENST00000531873 CMTM1Q8IZ96 169 aa2.07□□□□□ -2.08
CD44-234ENST00000531873 LYG1Q8N1E2 194 aa2.07□□□□□ -2.08
CD44-234ENST00000531873 LIX1Q8N485 282 aa2.07□□□□□ -2.08
CD44-234ENST00000531873 OR9G4Q8NGQ1 327 aa2.07□□□□□ -2.08
CD44-234ENST00000531873 OR10R2Q8NGX6 335 aa2.07□□□□□ -2.08
CD44-234ENST00000531873 OR52E5Q8NH55 327 aa2.07□□□□□ -2.08
CD44-234ENST00000531873 CXorf40AQ8TE69 158 aa2.07□□□□□ -2.08
CD44-234ENST00000531873 GPX8Q8TED1 209 aa2.07□□□□□ -2.08
CD44-234ENST00000531873 NDRG1Q92597 394 aaKnown RBP2.07□□□□□ -2.08
CD44-234ENST00000531873 ZNF75CPQ92670 426 aaPredicted RBP2.07□□□□□ -2.08
CD44-234ENST00000531873 YTHDF1Q9BYJ9 559 aaKnown RBP2.07□□□□□ -2.08
CD44-234ENST00000531873 ROGDIQ9GZN7 287 aa2.07□□□□□ -2.08
CD44-234ENST00000531873 PRR34Q9NV39 138 aa2.07□□□□□ -2.08
CD44-234ENST00000531873 MTCH1Q9NZJ7 389 aa2.07□□□□□ -2.08
CD44-234ENST00000531873 CLN8Q9UBY8 286 aa2.07□□□□□ -2.08
CD44-234ENST00000531873 SLC17A4Q9Y2C5 497 aa2.07□□□□□ -2.08
CD44-234ENST00000531873 LTBP1Q14766 1721 aa2.06□□□□□ -2.08
CD44-234ENST00000531873 IGLV3-10A0A075B6K4 115 aa2.06□□□□□ -2.08
CD44-234ENST00000531873 A0A0G2JN53 185 aa2.06□□□□□ -2.08
CD44-234ENST00000531873 H0YHG0 523 aa2.06□□□□□ -2.08
CD44-234ENST00000531873 EMC8O43402 210 aa2.06□□□□□ -2.08
CD44-234ENST00000531873 AIREO43918 545 aa2.06□□□□□ -2.08
CD44-234ENST00000531873 BBOX1O75936 387 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms