RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 CPQQ9Y646 472 aa2.78□□□□□ -1.96
PTPRK-220ENST00000531466 WDR97A6NE52 1622 aa2.78□□□□□ -1.96
PTPRK-220ENST00000531466 RFX7Q2KHR2 1363 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 MROH7-TTC4A0A0A0MT08 1334 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 NRCAMQ92823 1304 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 TRAV18A0A075B6X5 111 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 A0A1W2PQL4 384 aaPredicted RBP2.77□□□□□ -1.97
PTPRK-220ENST00000531466 METTL21EPA6NDL7 271 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 SAGE2PA6NJ88 616 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 RFPL4AA6NLU0 287 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 C17orf105B2RV13 164 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 PPIAL4DF5H284 164 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 F8VP50 259 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 RFPL4AL1F8VTS6 287 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 H3BN98 237 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 MKRN2OSH3BPM6 223 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 H7C0C1 242 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 SLC28A1O00337 649 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 ACOX3O15254 700 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 RS1O15537 224 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 SCO2O43819 266 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 MGRN1O60291 552 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 SRP72O76094 671 aaKnown RBP2.77□□□□□ -1.97
PTPRK-220ENST00000531466 PSMG1O95456 288 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 CA3P07451 260 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 GUSBP08236 651 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 ANKRD34CP0C6C1 535 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 UBCP0CG48 685 aaKnown RBP2.77□□□□□ -1.97
PTPRK-220ENST00000531466 SMIM6P0DI80 62 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 CD59P13987 128 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 ME2P23368 584 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 MMP11P24347 488 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 SERPINB5P36952 375 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 TALDO1P37837 337 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 MAP3K8P41279 467 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 MAGEA12P43365 314 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 YAP1P46937 504 aaKnown RBP2.77□□□□□ -1.97
PTPRK-220ENST00000531466 OR3A3P47888 321 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 MRPL19P49406 292 aaKnown RBP2.77□□□□□ -1.97
PTPRK-220ENST00000531466 CCR8P51685 355 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 SEC61GP60059 68 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 ERVS71-1P61550 626 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 TFAMQ00059 246 aaKnown RBP2.77□□□□□ -1.97
PTPRK-220ENST00000531466 MYBPC1Q00872 1141 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 FOLH1Q04609 750 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 TNFRSF9Q07011 255 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 SIGLEC14Q08ET2 396 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 MGAT3Q09327 533 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 STX4Q12846 297 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 DPYSL3Q14195 570 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 MESDQ14696 234 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 SPA17Q15506 151 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 KNOP1Q1ED39 458 aaKnown RBP2.77□□□□□ -1.97
PTPRK-220ENST00000531466 SLC36A2Q495M3 483 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 SBK1Q52WX2 424 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 CMPK2Q5EBM0 449 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 PIGGQ5H8A4 983 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 C6orf226Q5I0X4 101 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 ASPHD2Q6ICH7 369 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 ZNF770Q6IQ21 691 aaPredicted RBP2.77□□□□□ -1.97
PTPRK-220ENST00000531466 ZFP1Q6P2D0 407 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 NIPAL3Q6P499 406 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 CBLN3Q6UW01 205 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 PRSS55Q6UWB4 352 aaPredicted RBP2.77□□□□□ -1.97
PTPRK-220ENST00000531466 FAM159AQ6UWV7 190 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 C17orf107Q6ZR85 190 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 MRPL21Q7Z2W9 205 aaKnown RBP2.77□□□□□ -1.97
PTPRK-220ENST00000531466 ERASQ7Z444 233 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 PRUNE1Q86TP1 453 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 ZNF546Q86UE3 836 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 GPBP1Q86WP2 473 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 FUNDC1Q8IVP5 155 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 IFT20Q8IY31 132 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 MREGQ8N565 214 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 OR7G2Q8NG99 324 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 OR10A7Q8NGE5 316 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 DYNC2LI1Q8TCX1 351 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 NXPE2Q96DL1 559 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 PDXPQ96GD0 296 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 CELF6Q96J87 481 aaKnown RBP2.77□□□□□ -1.97
PTPRK-220ENST00000531466 TECTBQ96PL2 329 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 RASL10BQ96S79 203 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 C17orf62Q9BQA9 187 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 AIF1LQ9BQI0 150 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 TCEAL7Q9BRU2 100 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 TTYH2Q9BSA4 534 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 WRAP53Q9BUR4 548 aaKnown RBP2.77□□□□□ -1.97
PTPRK-220ENST00000531466 DDA1Q9BW61 102 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 BCL2L14Q9BZR8 327 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 SLC19A3Q9BZV2 496 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 SIRPDQ9H106 197 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 ASB7Q9H672 318 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 C10orf88Q9H8K7 445 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 WDR54Q9H977 334 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 ANKRA2Q9H9E1 313 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 WDR41Q9HAD4 459 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 RAVER2Q9HCJ3 691 aaKnown RBP2.77□□□□□ -1.97
PTPRK-220ENST00000531466 NANSQ9NR45 359 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 FBXO8Q9NRD0 319 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 FAIMQ9NVQ4 179 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms