RNA–Protein interactions for RNA: ENST00000531226.5

PACSIN3-208, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 654 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-208ENST00000531226 LILRB1Q8NHL6 650 aaPredicted RBP16.6■□□□□ 0.25
PACSIN3-208ENST00000531226 ZNF519Q8TB69 540 aa16.6■□□□□ 0.25
PACSIN3-208ENST00000531226 CANT1Q8WVQ1 401 aa16.6■□□□□ 0.25
PACSIN3-208ENST00000531226 AKAP1Q92667 903 aaKnown RBP eCLIP16.6■□□□□ 0.25
PACSIN3-208ENST00000531226 MCHR2Q969V1 340 aa16.6■□□□□ 0.25
PACSIN3-208ENST00000531226 GPX7Q96SL4 187 aaPredicted RBP16.6■□□□□ 0.25
PACSIN3-208ENST00000531226 KCNK17Q96T54 332 aa16.6■□□□□ 0.25
PACSIN3-208ENST00000531226 LRMDAQ9H2I8 198 aa16.6■□□□□ 0.25
PACSIN3-208ENST00000531226 MOV10Q9HCE1 1003 aaKnown RBP16.6■□□□□ 0.25
PACSIN3-208ENST00000531226 PRRC2AP48634 2157 aaKnown RBP16.6■□□□□ 0.25
PACSIN3-208ENST00000531226 A6NIZ1 184 aa16.59■□□□□ 0.25
PACSIN3-208ENST00000531226 SHISA9B4DS77 424 aa16.59■□□□□ 0.25
PACSIN3-208ENST00000531226 HS3ST1O14792 307 aa16.59■□□□□ 0.25
PACSIN3-208ENST00000531226 NR2C1P13056 603 aa16.59■□□□□ 0.25
PACSIN3-208ENST00000531226 HOXB6P17509 224 aaKnown RBP16.59■□□□□ 0.25
PACSIN3-208ENST00000531226 FPR3P25089 353 aa16.59■□□□□ 0.25
PACSIN3-208ENST00000531226 ACVR1BP36896 505 aa16.59■□□□□ 0.25
PACSIN3-208ENST00000531226 FXYD6P3P58550 94 aa16.59■□□□□ 0.25
PACSIN3-208ENST00000531226 RAP1BP61224 184 aa16.59■□□□□ 0.25
PACSIN3-208ENST00000531226 RAP1AP62834 184 aa16.59■□□□□ 0.25
PACSIN3-208ENST00000531226 ERVK-25P63136 954 aa16.59■□□□□ 0.25
PACSIN3-208ENST00000531226 MYBPC1Q00872 1141 aa16.59■□□□□ 0.25
PACSIN3-208ENST00000531226 SPOCK1Q08629 439 aa16.59■□□□□ 0.25
PACSIN3-208ENST00000531226 C1orf94Q6P1W5 598 aa16.59■□□□□ 0.25
PACSIN3-208ENST00000531226 PGBD2Q6P3X8 592 aa16.59■□□□□ 0.25
PACSIN3-208ENST00000531226 SPATA24Q86W54 205 aa16.59■□□□□ 0.25
PACSIN3-208ENST00000531226 LINC00471Q8N535 108 aa16.59■□□□□ 0.25
PACSIN3-208ENST00000531226 FAM169BQ8N8A8 192 aa16.59■□□□□ 0.25
PACSIN3-208ENST00000531226 NMD3Q96D46 503 aaKnown RBP16.59■□□□□ 0.25
PACSIN3-208ENST00000531226 RADILQ96JH8 1075 aa16.59■□□□□ 0.25
PACSIN3-208ENST00000531226 ALG12Q9BV10 488 aa16.59■□□□□ 0.25
PACSIN3-208ENST00000531226 CHID1Q9BWS9 393 aa16.59■□□□□ 0.25
PACSIN3-208ENST00000531226 MMADHCQ9H3L0 296 aaPredicted RBP16.59■□□□□ 0.25
PACSIN3-208ENST00000531226 REEP1Q9H902 201 aa16.59■□□□□ 0.25
PACSIN3-208ENST00000531226 TMEM38BQ9NVV0 291 aa16.59■□□□□ 0.25
PACSIN3-208ENST00000531226 VNN3Q9NY84 501 aa16.59■□□□□ 0.25
PACSIN3-208ENST00000531226 CRNNQ9UBG3 495 aaPredicted RBP16.59■□□□□ 0.25
PACSIN3-208ENST00000531226 ADAM18Q9Y3Q7 739 aa16.59■□□□□ 0.25
PACSIN3-208ENST00000531226 TCRBV3S1A0A5B6 114 aa16.58■□□□□ 0.24
PACSIN3-208ENST00000531226 ZNF503-AS2A6NEH8 195 aa16.58■□□□□ 0.24
PACSIN3-208ENST00000531226 CD53P19397 219 aa16.58■□□□□ 0.24
PACSIN3-208ENST00000531226 GSSP48637 474 aa16.58■□□□□ 0.24
PACSIN3-208ENST00000531226 CD47Q08722 323 aa16.58■□□□□ 0.24
PACSIN3-208ENST00000531226 C3orf36Q3SXR2 165 aa16.58■□□□□ 0.24
PACSIN3-208ENST00000531226 ZNF672Q499Z4 452 aaPredicted RBP16.58■□□□□ 0.24
PACSIN3-208ENST00000531226 C10orf128Q5T292 105 aa16.58■□□□□ 0.24
PACSIN3-208ENST00000531226 THSD4Q6ZMP0 1018 aa16.58■□□□□ 0.24
PACSIN3-208ENST00000531226 FAM122BQ7Z309 247 aa16.58■□□□□ 0.24
PACSIN3-208ENST00000531226 PIAS4Q8N2W9 510 aaPredicted RBP16.58■□□□□ 0.24
PACSIN3-208ENST00000531226 ARIH2OSQ8N7S6 290 aa16.58■□□□□ 0.24
PACSIN3-208ENST00000531226 ZNF611Q8N823 705 aa16.58■□□□□ 0.24
PACSIN3-208ENST00000531226 FANK1Q8TC84 345 aa16.58■□□□□ 0.24
PACSIN3-208ENST00000531226 FNDC8Q8TC99 324 aa16.58■□□□□ 0.24
PACSIN3-208ENST00000531226 GNPDA2Q8TDQ7 276 aa16.58■□□□□ 0.24
PACSIN3-208ENST00000531226 NEUROG1Q92886 237 aa16.58■□□□□ 0.24
PACSIN3-208ENST00000531226 MBD6Q96DN6 1003 aa16.58■□□□□ 0.24
PACSIN3-208ENST00000531226 SLC38A2Q96QD8 506 aa16.58■□□□□ 0.24
PACSIN3-208ENST00000531226 SMURF2Q9HAU4 748 aa16.58■□□□□ 0.24
PACSIN3-208ENST00000531226 NRIP3Q9NQ35 241 aa16.58■□□□□ 0.24
PACSIN3-208ENST00000531226 GRHPRQ9UBQ7 328 aa16.58■□□□□ 0.24
PACSIN3-208ENST00000531226 ITGB1BP2Q9UKP3 347 aa16.58■□□□□ 0.24
PACSIN3-208ENST00000531226 SAMHD1Q9Y3Z3 626 aaKnown RBP16.58■□□□□ 0.24
PACSIN3-208ENST00000531226 ARID1AO14497 2285 aa16.58■□□□□ 0.24
PACSIN3-208ENST00000531226 IGHV1-18A0A0C4DH31 117 aa16.57■□□□□ 0.24
PACSIN3-208ENST00000531226 CCNB2O95067 398 aa16.57■□□□□ 0.24
PACSIN3-208ENST00000531226 SLC2A10O95528 541 aa16.57■□□□□ 0.24
PACSIN3-208ENST00000531226 IGKV3-15P01624 115 aa16.57■□□□□ 0.24
PACSIN3-208ENST00000531226 IGLV1-44P01699 117 aa16.57■□□□□ 0.24
PACSIN3-208ENST00000531226 CBR1P16152 277 aa16.57■□□□□ 0.24
PACSIN3-208ENST00000531226 CAPZA2P47755 286 aa16.57■□□□□ 0.24
PACSIN3-208ENST00000531226 ZNF84P51523 738 aa16.57■□□□□ 0.24
PACSIN3-208ENST00000531226 FMODQ06828 376 aa16.57■□□□□ 0.24
PACSIN3-208ENST00000531226 PPP1R8Q12972 351 aaKnown RBP16.57■□□□□ 0.24
PACSIN3-208ENST00000531226 TSPAN31Q12999 210 aa16.57■□□□□ 0.24
PACSIN3-208ENST00000531226 GK3PQ14409 553 aa16.57■□□□□ 0.24
PACSIN3-208ENST00000531226 ZNF770Q6IQ21 691 aaPredicted RBP16.57■□□□□ 0.24
PACSIN3-208ENST00000531226 SMARCD3Q6STE5 483 aa16.57■□□□□ 0.24
PACSIN3-208ENST00000531226 SLC22A25Q6T423 547 aa16.57■□□□□ 0.24
PACSIN3-208ENST00000531226 OR9Q2Q8NGE9 314 aa16.57■□□□□ 0.24
PACSIN3-208ENST00000531226 NANOS1Q8WY41 292 aaKnown RBP16.57■□□□□ 0.24
PACSIN3-208ENST00000531226 FBXW5Q969U6 566 aa16.57■□□□□ 0.24
PACSIN3-208ENST00000531226 Q96M85 177 aa16.57■□□□□ 0.24
PACSIN3-208ENST00000531226 ZNF570Q96NI8 536 aa16.57■□□□□ 0.24
PACSIN3-208ENST00000531226 OR52D1Q9H346 318 aa16.57■□□□□ 0.24
PACSIN3-208ENST00000531226 ZNF224Q9NZL3 707 aa16.57■□□□□ 0.24
PACSIN3-208ENST00000531226 CSMD1Q96PZ7 3565 aa16.57■□□□□ 0.24
PACSIN3-208ENST00000531226 ENTPD5O75356 428 aa16.56■□□□□ 0.24
PACSIN3-208ENST00000531226 CST1P01037 141 aa16.56■□□□□ 0.24
PACSIN3-208ENST00000531226 OR8G3PP0DMU2 310 aa16.56■□□□□ 0.24
PACSIN3-208ENST00000531226 SDHAP31040 664 aa16.56■□□□□ 0.24
PACSIN3-208ENST00000531226 ARR3P36575 388 aa16.56■□□□□ 0.24
PACSIN3-208ENST00000531226 CDH11P55287 796 aa16.56■□□□□ 0.24
PACSIN3-208ENST00000531226 NRN1LQ496H8 165 aa16.56■□□□□ 0.24
PACSIN3-208ENST00000531226 MESTQ5EB52 335 aa16.56■□□□□ 0.24
PACSIN3-208ENST00000531226 GPR139Q6DWJ6 353 aa16.56■□□□□ 0.24
PACSIN3-208ENST00000531226 SLC25A47Q6Q0C1 308 aa16.56■□□□□ 0.24
PACSIN3-208ENST00000531226 DPY19L2P2Q6ZN68 376 aa16.56■□□□□ 0.24
PACSIN3-208ENST00000531226 MDP1Q86V88 176 aa16.56■□□□□ 0.24
PACSIN3-208ENST00000531226 SLC22A24Q8N4F4 322 aa16.56■□□□□ 0.24
PACSIN3-208ENST00000531226 CLDN22Q8N7P3 220 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms