RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 DUS4LO95620 317 aaKnown RBP5.78□□□□□ -1.48
CSDE1-213ENST00000530784 GPR75O95800 540 aa5.78□□□□□ -1.48
CSDE1-213ENST00000530784 EPPINO95925 133 aa5.78□□□□□ -1.48
CSDE1-213ENST00000530784 C1QAP02745 245 aa5.78□□□□□ -1.48
CSDE1-213ENST00000530784 HPNP05981 417 aa5.78□□□□□ -1.48
CSDE1-213ENST00000530784 SLC35E2BP0CK96 405 aa5.78□□□□□ -1.48
CSDE1-213ENST00000530784 SLC35E2P0CK97 266 aa5.78□□□□□ -1.48
CSDE1-213ENST00000530784 SSTR1P30872 391 aa5.78□□□□□ -1.48
CSDE1-213ENST00000530784 SPRP35270 261 aaPredicted RBP5.78□□□□□ -1.48
CSDE1-213ENST00000530784 CDK9P50750 372 aaKnown RBP5.78□□□□□ -1.48
CSDE1-213ENST00000530784 ARFIP1P53367 373 aa5.78□□□□□ -1.48
CSDE1-213ENST00000530784 RPP38P78345 283 aaKnown RBP5.78□□□□□ -1.48
CSDE1-213ENST00000530784 CALCOCO2Q13137 446 aa5.78□□□□□ -1.48
CSDE1-213ENST00000530784 SQLEQ14534 574 aa5.78□□□□□ -1.48
CSDE1-213ENST00000530784 KRT71Q3SY84 523 aa5.78□□□□□ -1.48
CSDE1-213ENST00000530784 SLC25A53Q5H9E4 307 aa5.78□□□□□ -1.48
CSDE1-213ENST00000530784 C6orf163Q5TEZ5 329 aa5.78□□□□□ -1.48
CSDE1-213ENST00000530784 OR52E8Q6IFG1 317 aa5.78□□□□□ -1.48
CSDE1-213ENST00000530784 RAPH1Q70E73 1250 aa5.78□□□□□ -1.48
CSDE1-213ENST00000530784 CMC1Q7Z7K0 106 aa5.78□□□□□ -1.48
CSDE1-213ENST00000530784 NUDT13Q86X67 352 aa5.78□□□□□ -1.48
CSDE1-213ENST00000530784 CTAGE3PQ8IX95 158 aa5.78□□□□□ -1.48
CSDE1-213ENST00000530784 RNF175Q8N4F7 328 aa5.78□□□□□ -1.48
CSDE1-213ENST00000530784 LSMEM1Q8N8F7 131 aa5.78□□□□□ -1.48
CSDE1-213ENST00000530784 OR5AP2Q8NGF4 316 aa5.78□□□□□ -1.48
CSDE1-213ENST00000530784 NXNL1Q96CM4 212 aa5.78□□□□□ -1.48
CSDE1-213ENST00000530784 SPDL1Q96EA4 605 aa5.78□□□□□ -1.48
CSDE1-213ENST00000530784 RILPQ96NA2 401 aa5.78□□□□□ -1.48
CSDE1-213ENST00000530784 SECISBP2Q96T21 854 aaKnown RBP5.78□□□□□ -1.48
CSDE1-213ENST00000530784 PROK2Q9HC23 129 aa5.78□□□□□ -1.48
CSDE1-213ENST00000530784 Q9N2K0 584 aa5.78□□□□□ -1.48
CSDE1-213ENST00000530784 TEX10Q9NXF1 929 aaPredicted RBP5.78□□□□□ -1.48
CSDE1-213ENST00000530784 ZNF629Q9UEG4 869 aaPredicted RBP5.78□□□□□ -1.48
CSDE1-213ENST00000530784 C15orf41Q9Y2V0 281 aa5.78□□□□□ -1.48
CSDE1-213ENST00000530784 SNX24Q9Y343 169 aa5.78□□□□□ -1.48
CSDE1-213ENST00000530784 ANGPTL3Q9Y5C1 460 aa5.78□□□□□ -1.48
CSDE1-213ENST00000530784 CACNA1CQ13936 2221 aa5.78□□□□□ -1.48
CSDE1-213ENST00000530784 HCFC1P51610 2035 aa5.77□□□□□ -1.49
CSDE1-213ENST00000530784 A0A0A6YYD5 115 aa5.77□□□□□ -1.49
CSDE1-213ENST00000530784 FAM159BA6NKW6 160 aa5.77□□□□□ -1.49
CSDE1-213ENST00000530784 SYCE1LA8MT33 242 aa5.77□□□□□ -1.49
CSDE1-213ENST00000530784 H0YIV9 168 aa5.77□□□□□ -1.49
CSDE1-213ENST00000530784 EIF3HO15372 352 aaKnown RBP eCLIP5.77□□□□□ -1.49
CSDE1-213ENST00000530784 EEDO75530 441 aaKnown RBP5.77□□□□□ -1.49
CSDE1-213ENST00000530784 GOSR1O95249 250 aa5.77□□□□□ -1.49
CSDE1-213ENST00000530784 AIFM1O95831 613 aa5.77□□□□□ -1.49
CSDE1-213ENST00000530784 CLPSP04118 112 aa5.77□□□□□ -1.49
CSDE1-213ENST00000530784 GSTA2P09210 222 aa5.77□□□□□ -1.49
CSDE1-213ENST00000530784 FAM58BPP0C7Q3 252 aa5.77□□□□□ -1.49
CSDE1-213ENST00000530784 SMIM18P0DKX4 95 aa5.77□□□□□ -1.49
CSDE1-213ENST00000530784 CRABP2P29373 138 aa5.77□□□□□ -1.49
CSDE1-213ENST00000530784 OPRM1P35372 400 aa5.77□□□□□ -1.49
CSDE1-213ENST00000530784 GCKP35557 465 aa5.77□□□□□ -1.49
CSDE1-213ENST00000530784 ZNF136P52737 540 aa5.77□□□□□ -1.49
CSDE1-213ENST00000530784 FBXW4P57775 412 aa5.77□□□□□ -1.49
CSDE1-213ENST00000530784 ZNF415Q09FC8 603 aa5.77□□□□□ -1.49
CSDE1-213ENST00000530784 RCAN2Q14206 197 aa5.77□□□□□ -1.49
CSDE1-213ENST00000530784 DEFB113Q30KQ7 82 aa5.77□□□□□ -1.49
CSDE1-213ENST00000530784 NHSL2Q5HYW2 709 aa5.77□□□□□ -1.49
CSDE1-213ENST00000530784 LIPJQ5W064 366 aa5.77□□□□□ -1.49
CSDE1-213ENST00000530784 ZNF613Q6PF04 617 aa5.77□□□□□ -1.49
CSDE1-213ENST00000530784 TMEM64Q6YI46 380 aa5.77□□□□□ -1.49
CSDE1-213ENST00000530784 TEX9Q8N6V9 391 aa5.77□□□□□ -1.49
CSDE1-213ENST00000530784 OR52N5Q8NH56 324 aa5.77□□□□□ -1.49
CSDE1-213ENST00000530784 SPPL2AQ8TCT8 520 aa5.77□□□□□ -1.49
CSDE1-213ENST00000530784 SSMEM1Q8WWF3 244 aa5.77□□□□□ -1.49
CSDE1-213ENST00000530784 ZNF717Q9BY31 904 aaPredicted RBP5.77□□□□□ -1.49
CSDE1-213ENST00000530784 UGT2B28Q9BY64 529 aa5.77□□□□□ -1.49
CSDE1-213ENST00000530784 ANGPTL4Q9BY76 406 aa5.77□□□□□ -1.49
CSDE1-213ENST00000530784 DPH5Q9H2P9 285 aa5.77□□□□□ -1.49
CSDE1-213ENST00000530784 UBQLN3Q9H347 655 aa5.77□□□□□ -1.49
CSDE1-213ENST00000530784 NMRAL1Q9HBL8 299 aa5.77□□□□□ -1.49
CSDE1-213ENST00000530784 RPH3AQ9Y2J0 694 aaPredicted RBP5.77□□□□□ -1.49
CSDE1-213ENST00000530784 SLC6A5Q9Y345 797 aa5.77□□□□□ -1.49
CSDE1-213ENST00000530784 ASB4Q9Y574 426 aa5.77□□□□□ -1.49
CSDE1-213ENST00000530784 SAR1BQ9Y6B6 198 aa5.77□□□□□ -1.49
CSDE1-213ENST00000530784 IKBKGQ9Y6K9 419 aa5.77□□□□□ -1.49
CSDE1-213ENST00000530784 WASHC1A8K0Z3 465 aa5.76□□□□□ -1.49
CSDE1-213ENST00000530784 ZNF195O14628 629 aa5.76□□□□□ -1.49
CSDE1-213ENST00000530784 CDH16O75309 829 aa5.76□□□□□ -1.49
CSDE1-213ENST00000530784 SEMA3DO95025 777 aa5.76□□□□□ -1.49
CSDE1-213ENST00000530784 ACSL3O95573 720 aa5.76□□□□□ -1.49
CSDE1-213ENST00000530784 ACTL6AO96019 429 aa5.76□□□□□ -1.49
CSDE1-213ENST00000530784 GBAP04062 536 aa5.76□□□□□ -1.49
CSDE1-213ENST00000530784 GFAPP14136 432 aa5.76□□□□□ -1.49
CSDE1-213ENST00000530784 PIK3R1P27986 724 aa5.76□□□□□ -1.49
CSDE1-213ENST00000530784 PTPN6P29350 595 aa5.76□□□□□ -1.49
CSDE1-213ENST00000530784 MNDAP41218 407 aa5.76□□□□□ -1.49
CSDE1-213ENST00000530784 CASP3P42574 277 aa5.76□□□□□ -1.49
CSDE1-213ENST00000530784 GNG11P61952 73 aa5.76□□□□□ -1.49
CSDE1-213ENST00000530784 MRPS25P82663 173 aaKnown RBP5.76□□□□□ -1.49
CSDE1-213ENST00000530784 FUT7Q11130 342 aa5.76□□□□□ -1.49
CSDE1-213ENST00000530784 CUL3Q13618 768 aa5.76□□□□□ -1.49
CSDE1-213ENST00000530784 FAM83EQ2M2I3 478 aa5.76□□□□□ -1.49
CSDE1-213ENST00000530784 KBTBD12Q3ZCT8 623 aa5.76□□□□□ -1.49
CSDE1-213ENST00000530784 EIPR1Q53HC9 387 aa5.76□□□□□ -1.49
CSDE1-213ENST00000530784 ANGPTL8Q6UXH0 198 aa5.76□□□□□ -1.49
CSDE1-213ENST00000530784 C3orf62Q6ZUJ4 267 aa5.76□□□□□ -1.49
CSDE1-213ENST00000530784 CYS1Q717R9 158 aa5.76□□□□□ -1.49
CSDE1-213ENST00000530784 GOLGA7Q7Z5G4 137 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms