RNA–Protein interactions for RNA: ENST00000530404.5

TSPAN4-219, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-219ENST00000530404 ZNF566Q969W8 418 aa17.76■□□□□ 0.43
TSPAN4-219ENST00000530404 TMEM186Q96B77 213 aa17.76■□□□□ 0.43
TSPAN4-219ENST00000530404 THOC1Q96FV9 657 aaKnown RBP17.76■□□□□ 0.43
TSPAN4-219ENST00000530404 LRRC37BQ96QE4 947 aa17.76■□□□□ 0.43
TSPAN4-219ENST00000530404 RACGAP1Q9H0H5 632 aa17.76■□□□□ 0.43
TSPAN4-219ENST00000530404 DENND2DQ9H6A0 471 aaPredicted RBP17.76■□□□□ 0.43
TSPAN4-219ENST00000530404 RNF121Q9H920 327 aa17.76■□□□□ 0.43
TSPAN4-219ENST00000530404 TMEM38BQ9NVV0 291 aa17.76■□□□□ 0.43
TSPAN4-219ENST00000530404 TAAR3PQ9P1P4 343 aa17.76■□□□□ 0.43
TSPAN4-219ENST00000530404 SLC7A7Q9UM01 511 aa17.76■□□□□ 0.43
TSPAN4-219ENST00000530404 CDC14BO60729 498 aa17.75■□□□□ 0.43
TSPAN4-219ENST00000530404 OR8G3PP0DMU2 310 aa17.75■□□□□ 0.43
TSPAN4-219ENST00000530404 GAAP10253 952 aa17.75■□□□□ 0.43
TSPAN4-219ENST00000530404 MYBPC1Q00872 1141 aa17.75■□□□□ 0.43
TSPAN4-219ENST00000530404 CYP51A1Q16850 503 aa17.75■□□□□ 0.43
TSPAN4-219ENST00000530404 NKPD1Q17RQ9 610 aa17.75■□□□□ 0.43
TSPAN4-219ENST00000530404 MEX3DQ86XN8 651 aaKnown RBP17.75■□□□□ 0.43
TSPAN4-219ENST00000530404 C11orf65Q8NCR3 313 aa17.75■□□□□ 0.43
TSPAN4-219ENST00000530404 SLC30A7Q8NEW0 376 aa17.75■□□□□ 0.43
TSPAN4-219ENST00000530404 ADAMTS16Q8TE57 1224 aa17.75■□□□□ 0.43
TSPAN4-219ENST00000530404 NANSQ9NR45 359 aa17.75■□□□□ 0.43
TSPAN4-219ENST00000530404 DHHO43323 396 aa17.74■□□□□ 0.43
TSPAN4-219ENST00000530404 FMO6PO60774 539 aa17.74■□□□□ 0.43
TSPAN4-219ENST00000530404 RP2O75695 350 aa17.74■□□□□ 0.43
TSPAN4-219ENST00000530404 MSMBP08118 114 aa17.74■□□□□ 0.43
TSPAN4-219ENST00000530404 QDPRP09417 244 aa17.74■□□□□ 0.43
TSPAN4-219ENST00000530404 PGA4P0DJD7 388 aa17.74■□□□□ 0.43
TSPAN4-219ENST00000530404 PGA3P0DJD8 388 aa17.74■□□□□ 0.43
TSPAN4-219ENST00000530404 UMPSP11172 480 aa17.74■□□□□ 0.43
TSPAN4-219ENST00000530404 PCMT1P22061 227 aa17.74■□□□□ 0.43
TSPAN4-219ENST00000530404 ATP4BP51164 291 aa17.74■□□□□ 0.43
TSPAN4-219ENST00000530404 ZP4Q12836 540 aa17.74■□□□□ 0.43
TSPAN4-219ENST00000530404 BEND6Q5SZJ8 279 aaPredicted RBP17.74■□□□□ 0.43
TSPAN4-219ENST00000530404 AVPI1Q5T686 147 aa17.74■□□□□ 0.43
TSPAN4-219ENST00000530404 ICA1LQ8NDH6 482 aa17.74■□□□□ 0.43
TSPAN4-219ENST00000530404 OR4K5Q8NGD3 323 aa17.74■□□□□ 0.43
TSPAN4-219ENST00000530404 GTF3AQ92664 365 aaKnown RBP17.74■□□□□ 0.43
TSPAN4-219ENST00000530404 SLC25A44Q96H78 314 aaPredicted RBP17.74■□□□□ 0.43
TSPAN4-219ENST00000530404 EVA1AQ9H8M9 152 aa17.74■□□□□ 0.43
TSPAN4-219ENST00000530404 CDH20Q9HBT6 801 aa17.74■□□□□ 0.43
TSPAN4-219ENST00000530404 FBXL3Q9UKT7 428 aa17.74■□□□□ 0.43
TSPAN4-219ENST00000530404 TFP02787 698 aa17.73■□□□□ 0.43
TSPAN4-219ENST00000530404 LCKP06239 509 aa17.73■□□□□ 0.43
TSPAN4-219ENST00000530404 CD247P20963 164 aa17.73■□□□□ 0.43
TSPAN4-219ENST00000530404 LMO4P61968 165 aa17.73■□□□□ 0.43
TSPAN4-219ENST00000530404 CCL8P80075 99 aa17.73■□□□□ 0.43
TSPAN4-219ENST00000530404 RUNX1T1Q06455 604 aa17.73■□□□□ 0.43
TSPAN4-219ENST00000530404 RBBP4Q09028 425 aa17.73■□□□□ 0.43
TSPAN4-219ENST00000530404 AGBL2Q5U5Z8 902 aa17.73■□□□□ 0.43
TSPAN4-219ENST00000530404 REP15Q6BDI9 236 aa17.73■□□□□ 0.43
TSPAN4-219ENST00000530404 C12orf54Q6X4T0 127 aa17.73■□□□□ 0.43
TSPAN4-219ENST00000530404 RETREG3Q86VR2 466 aa17.73■□□□□ 0.43
TSPAN4-219ENST00000530404 SEMA6DQ8NFY4 1073 aa17.73■□□□□ 0.43
TSPAN4-219ENST00000530404 ZNF347Q96SE7 839 aa17.73■□□□□ 0.43
TSPAN4-219ENST00000530404 LEF1Q9UJU2 399 aaPredicted RBP17.73■□□□□ 0.43
TSPAN4-219ENST00000530404 ZNF346Q9UL40 294 aaKnown RBP17.73■□□□□ 0.43
TSPAN4-219ENST00000530404 ERLIN1O75477 346 aa17.72■□□□□ 0.43
TSPAN4-219ENST00000530404 TMEM33P57088 247 aa17.72■□□□□ 0.43
TSPAN4-219ENST00000530404 CLRN1P58418 232 aa17.72■□□□□ 0.43
TSPAN4-219ENST00000530404 MVKQ03426 396 aa17.72■□□□□ 0.43
TSPAN4-219ENST00000530404 GLO1Q04760 184 aa17.72■□□□□ 0.43
TSPAN4-219ENST00000530404 TMEM53Q6P2H8 277 aa17.72■□□□□ 0.43
TSPAN4-219ENST00000530404 DEF8Q6ZN54 512 aa17.72■□□□□ 0.43
TSPAN4-219ENST00000530404 SLC16A14Q7RTX9 510 aa17.72■□□□□ 0.43
TSPAN4-219ENST00000530404 LRRC18Q8N456 261 aa17.72■□□□□ 0.43
TSPAN4-219ENST00000530404 OR51F2Q8NH61 342 aa17.72■□□□□ 0.43
TSPAN4-219ENST00000530404 SYNPRQ8TBG9 265 aa17.72■□□□□ 0.43
TSPAN4-219ENST00000530404 TAMM41Q96BW9 452 aa17.72■□□□□ 0.43
TSPAN4-219ENST00000530404 CGREF1Q99674 301 aa17.72■□□□□ 0.43
TSPAN4-219ENST00000530404 ZNF385DQ9H6B1 395 aa17.72■□□□□ 0.43
TSPAN4-219ENST00000530404 ZNF229Q9UJW7 825 aa17.72■□□□□ 0.43
TSPAN4-219ENST00000530404 GRIP1Q9Y3R0 1128 aa17.72■□□□□ 0.43
TSPAN4-219ENST00000530404 TRAPPC13A5PLN9 417 aa17.71■□□□□ 0.43
TSPAN4-219ENST00000530404 C17orf100A8MU93 164 aa17.71■□□□□ 0.43
TSPAN4-219ENST00000530404 BLOC1S5-TXNDC5H3BN57 136 aa17.71■□□□□ 0.43
TSPAN4-219ENST00000530404 FARS2O95363 451 aaKnown RBP17.71■□□□□ 0.43
TSPAN4-219ENST00000530404 BCL10O95999 233 aa17.71■□□□□ 0.43
TSPAN4-219ENST00000530404 HIST1H2ABP04908 130 aa17.71■□□□□ 0.43
TSPAN4-219ENST00000530404 F13BP05160 661 aa17.71■□□□□ 0.43
TSPAN4-219ENST00000530404 ASAH2BP0C7U1 165 aa17.71■□□□□ 0.43
TSPAN4-219ENST00000530404 KLF3P57682 345 aaPredicted RBP17.71■□□□□ 0.43
TSPAN4-219ENST00000530404 FAHD2BQ6P2I3 314 aaPredicted RBP17.71■□□□□ 0.43
TSPAN4-219ENST00000530404 SHQ1Q6PI26 577 aaKnown RBP17.71■□□□□ 0.43
TSPAN4-219ENST00000530404 HIST3H2AQ7L7L0 130 aa17.71■□□□□ 0.43
TSPAN4-219ENST00000530404 NANOGNBQ7Z5D8 188 aa17.71■□□□□ 0.43
TSPAN4-219ENST00000530404 SYT14Q8NB59 555 aa17.71■□□□□ 0.43
TSPAN4-219ENST00000530404 HIST1H2ACQ93077 130 aa17.71■□□□□ 0.43
TSPAN4-219ENST00000530404 MCHR2Q969V1 340 aa17.71■□□□□ 0.43
TSPAN4-219ENST00000530404 FAHD2AQ96GK7 314 aa17.71■□□□□ 0.43
TSPAN4-219ENST00000530404 ZNF416Q9BWM5 594 aa17.71■□□□□ 0.43
TSPAN4-219ENST00000530404 MEPEQ9NQ76 525 aaPredicted RBP17.71■□□□□ 0.43
TSPAN4-219ENST00000530404 HINT3Q9NQE9 182 aaKnown RBP17.71■□□□□ 0.43
TSPAN4-219ENST00000530404 NDUFAF1Q9Y375 327 aa17.71■□□□□ 0.43
TSPAN4-219ENST00000530404 AVPP01185 164 aa17.7■□□□□ 0.42
TSPAN4-219ENST00000530404 IGHG1P01857 330 aa17.7■□□□□ 0.42
TSPAN4-219ENST00000530404 CFPP27918 469 aa17.7■□□□□ 0.42
TSPAN4-219ENST00000530404 MRPS11P82912 194 aaKnown RBP17.7■□□□□ 0.42
TSPAN4-219ENST00000530404 TBC1D28Q2M2D7 210 aa17.7■□□□□ 0.42
TSPAN4-219ENST00000530404 TMEM154Q6P9G4 183 aa17.7■□□□□ 0.42
TSPAN4-219ENST00000530404 C1orf229Q6ZS94 237 aaPredicted RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms