RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 PCSK6P29122 969 aa12.85□□□□□ -0.35
TTC39A-216ENST00000530004 NAA10P41227 235 aaPredicted RBP12.85□□□□□ -0.35
TTC39A-216ENST00000530004 MLLT11Q13015 90 aaPredicted RBP12.85□□□□□ -0.35
TTC39A-216ENST00000530004 CTF1Q16619 201 aa12.85□□□□□ -0.35
TTC39A-216ENST00000530004 LINC01590Q5TEZ4 76 aa12.85□□□□□ -0.35
TTC39A-216ENST00000530004 TRILQ7L0X0 811 aa12.85□□□□□ -0.35
TTC39A-216ENST00000530004 OR6V1Q8N148 313 aa12.85□□□□□ -0.35
TTC39A-216ENST00000530004 KLHL36Q8N4N3 616 aa12.85□□□□□ -0.35
TTC39A-216ENST00000530004 GPR137Q96N19 417 aa12.85□□□□□ -0.35
TTC39A-216ENST00000530004 BBC3Q96PG8 261 aaPredicted RBP12.85□□□□□ -0.35
TTC39A-216ENST00000530004 RERGLQ9H628 205 aa12.85□□□□□ -0.35
TTC39A-216ENST00000530004 INPP5EQ9NRR6 644 aa12.85□□□□□ -0.35
TTC39A-216ENST00000530004 PTTG2Q9NZH5 202 aa12.85□□□□□ -0.35
TTC39A-216ENST00000530004 SPTA1P02549 2419 aa12.84□□□□□ -0.35
TTC39A-216ENST00000530004 A0A0J9YW62 118 aa12.84□□□□□ -0.35
TTC39A-216ENST00000530004 A0A1B0GVC2 190 aa12.84□□□□□ -0.35
TTC39A-216ENST00000530004 A6NIZ1 184 aa12.84□□□□□ -0.35
TTC39A-216ENST00000530004 AQP7P3A6NL99 342 aa12.84□□□□□ -0.35
TTC39A-216ENST00000530004 LINC01387J3KSC0 135 aa12.84□□□□□ -0.35
TTC39A-216ENST00000530004 CCRL2O00421 344 aa12.84□□□□□ -0.35
TTC39A-216ENST00000530004 KLK2P20151 261 aa12.84□□□□□ -0.35
TTC39A-216ENST00000530004 TDGF1P3P51864 188 aa12.84□□□□□ -0.35
TTC39A-216ENST00000530004 CLDN20P56880 219 aa12.84□□□□□ -0.35
TTC39A-216ENST00000530004 RAP1BP61224 184 aa12.84□□□□□ -0.35
TTC39A-216ENST00000530004 RAP1AP62834 184 aa12.84□□□□□ -0.35
TTC39A-216ENST00000530004 ACTC1P68032 377 aa12.84□□□□□ -0.35
TTC39A-216ENST00000530004 ACTA1P68133 377 aa12.84□□□□□ -0.35
TTC39A-216ENST00000530004 CSNK2A1P68400 391 aaPredicted RBP12.84□□□□□ -0.35
TTC39A-216ENST00000530004 RUNX1T1Q06455 604 aa12.84□□□□□ -0.35
TTC39A-216ENST00000530004 ZNF239Q16600 458 aaKnown RBP12.84□□□□□ -0.35
TTC39A-216ENST00000530004 TMEM225Q6GV28 225 aa12.84□□□□□ -0.35
TTC39A-216ENST00000530004 LYPD4Q6UWN0 246 aa12.84□□□□□ -0.35
TTC39A-216ENST00000530004 GPAT4Q86UL3 456 aa12.84□□□□□ -0.35
TTC39A-216ENST00000530004 UEVLDQ8IX04 471 aa12.84□□□□□ -0.35
TTC39A-216ENST00000530004 OR52N1Q8NH53 320 aa12.84□□□□□ -0.35
TTC39A-216ENST00000530004 TXNDC15Q96J42 360 aa12.84□□□□□ -0.35
TTC39A-216ENST00000530004 SLX1AQ9BQ83 275 aa12.84□□□□□ -0.35
TTC39A-216ENST00000530004 ALG8Q9BVK2 526 aa12.84□□□□□ -0.35
TTC39A-216ENST00000530004 NUAK2Q9H093 628 aa12.84□□□□□ -0.35
TTC39A-216ENST00000530004 EXO5Q9H790 373 aa12.84□□□□□ -0.35
TTC39A-216ENST00000530004 MED29Q9NX70 200 aa12.84□□□□□ -0.35
TTC39A-216ENST00000530004 VSX1Q9NZR4 365 aaPredicted RBP12.84□□□□□ -0.35
TTC39A-216ENST00000530004 NOX1Q9Y5S8 564 aa12.84□□□□□ -0.35
TTC39A-216ENST00000530004 NCKAP5O14513 1909 aa12.84□□□□□ -0.35
TTC39A-216ENST00000530004 SLC22A23A1A5C7 686 aa12.84□□□□□ -0.35
TTC39A-216ENST00000530004 H0YC42 278 aa12.84□□□□□ -0.35
TTC39A-216ENST00000530004 SEC14L5O43304 696 aa12.84□□□□□ -0.35
TTC39A-216ENST00000530004 SELENOFO60613 162 aa12.84□□□□□ -0.35
TTC39A-216ENST00000530004 RAMP1O60894 148 aa12.84□□□□□ -0.35
TTC39A-216ENST00000530004 TFP02787 698 aa12.84□□□□□ -0.35
TTC39A-216ENST00000530004 GADD45AP24522 165 aa12.84□□□□□ -0.35
TTC39A-216ENST00000530004 HCCSP53701 268 aa12.84□□□□□ -0.35
TTC39A-216ENST00000530004 LSM3P62310 102 aaKnown RBP12.84□□□□□ -0.35
TTC39A-216ENST00000530004 GALEQ14376 348 aa12.84□□□□□ -0.35
TTC39A-216ENST00000530004 SSX1Q16384 188 aa12.84□□□□□ -0.35
TTC39A-216ENST00000530004 KRTCAP3Q53RY4 240 aa12.84□□□□□ -0.35
TTC39A-216ENST00000530004 EEF1A1P5Q5VTE0 462 aa12.84□□□□□ -0.35
TTC39A-216ENST00000530004 FAM205BPQ63HN1 556 aa12.84□□□□□ -0.35
TTC39A-216ENST00000530004 ZNF322Q6U7Q0 402 aaPredicted RBP12.84□□□□□ -0.35
TTC39A-216ENST00000530004 GGNQ86UU5 652 aa12.84□□□□□ -0.35
TTC39A-216ENST00000530004 SLC35F2Q8IXU6 374 aa12.84□□□□□ -0.35
TTC39A-216ENST00000530004 ZNF485Q8NCK3 441 aa12.84□□□□□ -0.35
TTC39A-216ENST00000530004 SPRYD4Q8WW59 207 aaPredicted RBP12.84□□□□□ -0.35
TTC39A-216ENST00000530004 RPL3LQ92901 407 aaKnown RBP12.84□□□□□ -0.35
TTC39A-216ENST00000530004 OXGR1Q96P68 337 aa12.84□□□□□ -0.35
TTC39A-216ENST00000530004 TSC22D3Q99576 134 aa12.84□□□□□ -0.35
TTC39A-216ENST00000530004 BCL7BQ9BQE9 202 aa12.84□□□□□ -0.35
TTC39A-216ENST00000530004 CAB39Q9Y376 341 aaPredicted RBP12.84□□□□□ -0.35
TTC39A-216ENST00000530004 A0A1W2PPW3 197 aa12.83□□□□□ -0.36
TTC39A-216ENST00000530004 A0A1W2PQL4 384 aaPredicted RBP12.83□□□□□ -0.36
TTC39A-216ENST00000530004 TRIM64BA6NI03 449 aa12.83□□□□□ -0.36
TTC39A-216ENST00000530004 EIF1AYO14602 144 aaKnown RBP12.83□□□□□ -0.36
TTC39A-216ENST00000530004 EIF1BO60739 113 aaKnown RBP12.83□□□□□ -0.36
TTC39A-216ENST00000530004 ACTL6AO96019 429 aa12.83□□□□□ -0.36
TTC39A-216ENST00000530004 POU3F2P20265 443 aaPredicted RBP12.83□□□□□ -0.36
TTC39A-216ENST00000530004 STARP49675 285 aa12.83□□□□□ -0.36
TTC39A-216ENST00000530004 BIDP55957 195 aa12.83□□□□□ -0.36
TTC39A-216ENST00000530004 H3F3AP84243 136 aa12.83□□□□□ -0.36
TTC39A-216ENST00000530004 ZNF85Q03923 595 aa12.83□□□□□ -0.36
TTC39A-216ENST00000530004 AQP6Q13520 282 aa12.83□□□□□ -0.36
TTC39A-216ENST00000530004 VASNQ6EMK4 673 aa12.83□□□□□ -0.36
TTC39A-216ENST00000530004 NHLRC1Q6VVB1 395 aa12.83□□□□□ -0.36
TTC39A-216ENST00000530004 TMPRSS11AQ6ZMR5 421 aa12.83□□□□□ -0.36
TTC39A-216ENST00000530004 ERI1Q8IV48 349 aaKnown RBP12.83□□□□□ -0.36
TTC39A-216ENST00000530004 WDFY1Q8IWB7 410 aa12.83□□□□□ -0.36
TTC39A-216ENST00000530004 ALDH16A1Q8IZ83 802 aa12.83□□□□□ -0.36
TTC39A-216ENST00000530004 ZNF511Q8NB15 262 aa12.83□□□□□ -0.36
TTC39A-216ENST00000530004 SYT14Q8NB59 555 aa12.83□□□□□ -0.36
TTC39A-216ENST00000530004 ABTB1Q969K4 478 aaPredicted RBP12.83□□□□□ -0.36
TTC39A-216ENST00000530004 DCUN1D5Q9BTE7 237 aa12.83□□□□□ -0.36
TTC39A-216ENST00000530004 ISG20L2Q9H9L3 353 aaKnown RBP12.83□□□□□ -0.36
TTC39A-216ENST00000530004 SPRR3Q9UBC9 169 aa12.83□□□□□ -0.36
TTC39A-216ENST00000530004 FKBP7Q9Y680 259 aa12.83□□□□□ -0.36
TTC39A-216ENST00000530004 IGHV3-15A0A0B4J1V0 119 aa12.82□□□□□ -0.36
TTC39A-216ENST00000530004 A0A1B0GTH9 108 aa12.82□□□□□ -0.36
TTC39A-216ENST00000530004 AQP7O14520 342 aa12.82□□□□□ -0.36
TTC39A-216ENST00000530004 AIREO43918 545 aa12.82□□□□□ -0.36
TTC39A-216ENST00000530004 SLC16A7O60669 478 aa12.82□□□□□ -0.36
TTC39A-216ENST00000530004 OR2T7P0C7T2 308 aa12.82□□□□□ -0.36
TTC39A-216ENST00000530004 LIPKQ5VXJ0 399 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms