RNA–Protein interactions for RNA: ENST00000528429.5

SOX6-211, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-211ENST00000528429 MMP27Q9H306 513 aa6.97□□□□□ -1.29
SOX6-211ENST00000528429 FN3KQ9H479 309 aa6.97□□□□□ -1.29
SOX6-211ENST00000528429 RERGLQ9H628 205 aa6.97□□□□□ -1.29
SOX6-211ENST00000528429 GSN-AS1Q9NRJ2 163 aa6.97□□□□□ -1.29
SOX6-211ENST00000528429 UFSP2Q9NUQ7 469 aa6.97□□□□□ -1.29
SOX6-211ENST00000528429 TMED7Q9Y3B3 224 aa6.97□□□□□ -1.29
SOX6-211ENST00000528429 COL5A1P20908 1838 aaPredicted RBP6.97□□□□□ -1.29
SOX6-211ENST00000528429 A0A1W2PPL8 197 aa6.97□□□□□ -1.29
SOX6-211ENST00000528429 B4DXG7 233 aa6.97□□□□□ -1.29
SOX6-211ENST00000528429 C11orf98E9PRG8 122 aa6.97□□□□□ -1.29
SOX6-211ENST00000528429 H7C1Q1 480 aa6.97□□□□□ -1.29
SOX6-211ENST00000528429 GMDSO60547 372 aa6.97□□□□□ -1.29
SOX6-211ENST00000528429 DLGAP3O95886 979 aa6.97□□□□□ -1.29
SOX6-211ENST00000528429 IFNGP01579 166 aa6.97□□□□□ -1.29
SOX6-211ENST00000528429 FBXO45P0C2W1 286 aa6.97□□□□□ -1.29
SOX6-211ENST00000528429 F8A1P23610 371 aa6.97□□□□□ -1.29
SOX6-211ENST00000528429 ACVR2AP27037 513 aa6.97□□□□□ -1.29
SOX6-211ENST00000528429 TGFBR1P36897 503 aa6.97□□□□□ -1.29
SOX6-211ENST00000528429 DLSTP36957 453 aa6.97□□□□□ -1.29
SOX6-211ENST00000528429 TGFBR2P37173 567 aa6.97□□□□□ -1.29
SOX6-211ENST00000528429 CD79BP40259 229 aa6.97□□□□□ -1.29
SOX6-211ENST00000528429 HOXA1P49639 335 aaPredicted RBP6.97□□□□□ -1.29
SOX6-211ENST00000528429 POLR2HP52434 150 aaKnown RBP6.97□□□□□ -1.29
SOX6-211ENST00000528429 RAB40BQ12829 278 aa6.97□□□□□ -1.29
SOX6-211ENST00000528429 SPHARQ15513 63 aa6.97□□□□□ -1.29
SOX6-211ENST00000528429 CTF1Q16619 201 aa6.97□□□□□ -1.29
SOX6-211ENST00000528429 TM4SF20Q53R12 229 aa6.97□□□□□ -1.29
SOX6-211ENST00000528429 NIPAL3Q6P499 406 aa6.97□□□□□ -1.29
SOX6-211ENST00000528429 ZNF367Q7RTV3 350 aa6.97□□□□□ -1.29
SOX6-211ENST00000528429 RPS19BP1Q86WX3 136 aaKnown RBP6.97□□□□□ -1.29
SOX6-211ENST00000528429 MISPQ8IVT2 679 aa6.97□□□□□ -1.29
SOX6-211ENST00000528429 ROBO4Q8WZ75 1007 aa6.97□□□□□ -1.29
SOX6-211ENST00000528429 YIPF6Q96EC8 236 aa6.97□□□□□ -1.29
SOX6-211ENST00000528429 C5orf34Q96MH7 638 aa6.97□□□□□ -1.29
SOX6-211ENST00000528429 MND1Q9BWT6 205 aa6.97□□□□□ -1.29
SOX6-211ENST00000528429 MRPL37Q9BZE1 423 aaKnown RBP6.97□□□□□ -1.29
SOX6-211ENST00000528429 PCNX3Q9H6A9 2034 aa6.97□□□□□ -1.29
SOX6-211ENST00000528429 SRA1Q9HD15 236 aaKnown RBP6.97□□□□□ -1.29
SOX6-211ENST00000528429 SEC14L4Q9UDX3 406 aa6.97□□□□□ -1.29
SOX6-211ENST00000528429 MRPS18BQ9Y676 258 aaKnown RBP6.97□□□□□ -1.29
SOX6-211ENST00000528429 MED12Q93074 2177 aa6.97□□□□□ -1.29
SOX6-211ENST00000528429 TMEM72A0PK05 275 aa6.96□□□□□ -1.29
SOX6-211ENST00000528429 H3BML4 177 aa6.96□□□□□ -1.29
SOX6-211ENST00000528429 ADAM10O14672 748 aa6.96□□□□□ -1.29
SOX6-211ENST00000528429 IMPA2O14732 288 aa6.96□□□□□ -1.29
SOX6-211ENST00000528429 AIREO43918 545 aa6.96□□□□□ -1.29
SOX6-211ENST00000528429 GABARAPO95166 117 aa6.96□□□□□ -1.29
SOX6-211ENST00000528429 BCL10O95999 233 aa6.96□□□□□ -1.29
SOX6-211ENST00000528429 OPN1LWP04000 364 aa6.96□□□□□ -1.29
SOX6-211ENST00000528429 GADD45AP24522 165 aa6.96□□□□□ -1.29
SOX6-211ENST00000528429 HTR1FP30939 366 aa6.96□□□□□ -1.29
SOX6-211ENST00000528429 CASP3P42574 277 aa6.96□□□□□ -1.29
SOX6-211ENST00000528429 RGS6P49758 472 aa6.96□□□□□ -1.29
SOX6-211ENST00000528429 SSR4P51571 173 aa6.96□□□□□ -1.29
SOX6-211ENST00000528429 ZNF41P51814 821 aaPredicted RBP6.96□□□□□ -1.29
SOX6-211ENST00000528429 CTXN1P60606 82 aa6.96□□□□□ -1.29
SOX6-211ENST00000528429 PRPS1P60891 318 aa6.96□□□□□ -1.29
SOX6-211ENST00000528429 LTBQ06643 244 aa6.96□□□□□ -1.29
SOX6-211ENST00000528429 EIF3IQ13347 325 aaKnown RBP6.96□□□□□ -1.29
SOX6-211ENST00000528429 CAMK2DQ13557 499 aa6.96□□□□□ -1.29
SOX6-211ENST00000528429 DNASE1L3Q13609 305 aa6.96□□□□□ -1.29
SOX6-211ENST00000528429 ZNF846Q147U1 533 aa6.96□□□□□ -1.29
SOX6-211ENST00000528429 SOWAHCQ53LP3 525 aaPredicted RBP6.96□□□□□ -1.29
SOX6-211ENST00000528429 ALG10Q5BKT4 473 aa6.96□□□□□ -1.29
SOX6-211ENST00000528429 B3GNTL1Q67FW5 361 aaPredicted RBP6.96□□□□□ -1.29
SOX6-211ENST00000528429 GRINAQ7Z429 371 aa6.96□□□□□ -1.29
SOX6-211ENST00000528429 ADGRG3Q86Y34 549 aa6.96□□□□□ -1.29
SOX6-211ENST00000528429 GID4Q8IVV7 300 aa6.96□□□□□ -1.29
SOX6-211ENST00000528429 OR5M1Q8NGP8 315 aa6.96□□□□□ -1.29
SOX6-211ENST00000528429 NDNFQ8TB73 568 aa6.96□□□□□ -1.29
SOX6-211ENST00000528429 SMAP2Q8WU79 429 aaPredicted RBP6.96□□□□□ -1.29
SOX6-211ENST00000528429 TMEM234Q8WY98 164 aa6.96□□□□□ -1.29
SOX6-211ENST00000528429 PTP4A1Q93096 173 aa6.96□□□□□ -1.29
SOX6-211ENST00000528429 TRIM63Q969Q1 353 aa6.96□□□□□ -1.29
SOX6-211ENST00000528429 Q96M85 177 aa6.96□□□□□ -1.29
SOX6-211ENST00000528429 JSRP1Q96MG2 331 aaPredicted RBP6.96□□□□□ -1.29
SOX6-211ENST00000528429 CCNL2Q96S94 520 aaPredicted RBP6.96□□□□□ -1.29
SOX6-211ENST00000528429 NMNAT3Q96T66 252 aa6.96□□□□□ -1.29
SOX6-211ENST00000528429 GON7Q9BXV9 100 aa6.96□□□□□ -1.29
SOX6-211ENST00000528429 TMEM185BQ9H7F4 350 aa6.96□□□□□ -1.29
SOX6-211ENST00000528429 EXOSC4Q9NPD3 245 aaKnown RBP6.96□□□□□ -1.29
SOX6-211ENST00000528429 P4HTMQ9NXG6 502 aa6.96□□□□□ -1.29
SOX6-211ENST00000528429 WIF1Q9Y5W5 379 aa6.96□□□□□ -1.29
SOX6-211ENST00000528429 TRAV36DV7A0A075B6V5 113 aa6.96□□□□□ -1.3
SOX6-211ENST00000528429 TEX13CA0A0J9YWL9 993 aa6.96□□□□□ -1.3
SOX6-211ENST00000528429 ANKUB1A6NFN9 424 aa6.96□□□□□ -1.3
SOX6-211ENST00000528429 C22orf46C9J442 243 aa6.96□□□□□ -1.3
SOX6-211ENST00000528429 M0R3G1 203 aa6.96□□□□□ -1.3
SOX6-211ENST00000528429 TP53I11O14683 189 aa6.96□□□□□ -1.3
SOX6-211ENST00000528429 EIF1BO60739 113 aaKnown RBP6.96□□□□□ -1.3
SOX6-211ENST00000528429 CLPXO76031 633 aa6.96□□□□□ -1.3
SOX6-211ENST00000528429 AHSA1O95433 338 aa6.96□□□□□ -1.3
SOX6-211ENST00000528429 F10P00742 488 aa6.96□□□□□ -1.3
SOX6-211ENST00000528429 TFPIP10646 304 aa6.96□□□□□ -1.3
SOX6-211ENST00000528429 PTAFRP25105 342 aa6.96□□□□□ -1.3
SOX6-211ENST00000528429 EIF1P41567 113 aaKnown RBP6.96□□□□□ -1.3
SOX6-211ENST00000528429 MEOX2P50222 304 aa6.96□□□□□ -1.3
SOX6-211ENST00000528429 RPL18Q07020 188 aaKnown RBP6.96□□□□□ -1.3
SOX6-211ENST00000528429 FOXF1Q12946 379 aa6.96□□□□□ -1.3
SOX6-211ENST00000528429 NTRK2Q16620 822 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms