RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 C14orf119Q9NWQ9 140 aa13.28□□□□□ -0.28
ECHDC1-220ENST00000528402 FARSAQ9Y285 508 aaKnown RBP13.28□□□□□ -0.28
ECHDC1-220ENST00000528402 COL27A1Q8IZC6 1860 aaPredicted RBP13.27□□□□□ -0.29
ECHDC1-220ENST00000528402 A0A0G2JK05 382 aa13.27□□□□□ -0.29
ECHDC1-220ENST00000528402 LNP1A1A4G5 178 aa13.27□□□□□ -0.29
ECHDC1-220ENST00000528402 ZNF254O75437 659 aa13.27□□□□□ -0.29
ECHDC1-220ENST00000528402 NCR1O76036 304 aa13.27□□□□□ -0.29
ECHDC1-220ENST00000528402 PLGP00747 810 aaPredicted RBP13.27□□□□□ -0.29
ECHDC1-220ENST00000528402 SLC2A2P11168 524 aaPredicted RBP13.27□□□□□ -0.29
ECHDC1-220ENST00000528402 RBMS1P29558 406 aaKnown RBP13.27□□□□□ -0.29
ECHDC1-220ENST00000528402 PSMB10P40306 273 aa13.27□□□□□ -0.29
ECHDC1-220ENST00000528402 DSCR4P56555 118 aaPredicted RBP13.27□□□□□ -0.29
ECHDC1-220ENST00000528402 RPS15P62841 145 aaKnown RBP13.27□□□□□ -0.29
ECHDC1-220ENST00000528402 IL18Q14116 193 aa13.27□□□□□ -0.29
ECHDC1-220ENST00000528402 BAK1Q16611 211 aa13.27□□□□□ -0.29
ECHDC1-220ENST00000528402 Q499Y3 187 aa13.27□□□□□ -0.29
ECHDC1-220ENST00000528402 TMEM164Q5U3C3 297 aa13.27□□□□□ -0.29
ECHDC1-220ENST00000528402 DEGS2Q6QHC5 323 aa13.27□□□□□ -0.29
ECHDC1-220ENST00000528402 DPY19L4Q7Z388 723 aa13.27□□□□□ -0.29
ECHDC1-220ENST00000528402 LSRQ86X29 649 aaPredicted RBP13.27□□□□□ -0.29
ECHDC1-220ENST00000528402 GTPBP8Q8N3Z3 284 aaPredicted RBP13.27□□□□□ -0.29
ECHDC1-220ENST00000528402 TMEM156Q8N614 296 aa13.27□□□□□ -0.29
ECHDC1-220ENST00000528402 WDSUB1Q8N9V3 476 aa13.27□□□□□ -0.29
ECHDC1-220ENST00000528402 SNRNP27Q8WVK2 155 aaKnown RBP13.27□□□□□ -0.29
ECHDC1-220ENST00000528402 TSPAN10Q9H1Z9 355 aaPredicted RBP13.27□□□□□ -0.29
ECHDC1-220ENST00000528402 SMOC1Q9H4F8 434 aa13.27□□□□□ -0.29
ECHDC1-220ENST00000528402 CDCP1Q9H5V8 836 aa13.27□□□□□ -0.29
ECHDC1-220ENST00000528402 SH2D2AQ9NP31 389 aa13.27□□□□□ -0.29
ECHDC1-220ENST00000528402 POLE4Q9NR33 117 aa13.27□□□□□ -0.29
ECHDC1-220ENST00000528402 IKZF2Q9UKS7 526 aa13.27□□□□□ -0.29
ECHDC1-220ENST00000528402 TCFL5Q9UL49 500 aa13.27□□□□□ -0.29
ECHDC1-220ENST00000528402 RASD1Q9Y272 281 aa13.27□□□□□ -0.29
ECHDC1-220ENST00000528402 DNAH14Q0VDD8 3507 aa13.26□□□□□ -0.29
ECHDC1-220ENST00000528402 ZDBF2Q9HCK1 2354 aa13.26□□□□□ -0.29
ECHDC1-220ENST00000528402 TRBV5-5A0A0J9YX44 114 aa13.26□□□□□ -0.29
ECHDC1-220ENST00000528402 SMIM30A4D0T7 59 aa13.26□□□□□ -0.29
ECHDC1-220ENST00000528402 C4orf47A7E2U8 309 aa13.26□□□□□ -0.29
ECHDC1-220ENST00000528402 MAGEB4O15481 346 aaPredicted RBP13.26□□□□□ -0.29
ECHDC1-220ENST00000528402 GDF9O60383 454 aa13.26□□□□□ -0.29
ECHDC1-220ENST00000528402 AQP8O94778 261 aa13.26□□□□□ -0.29
ECHDC1-220ENST00000528402 ZFPL1O95159 310 aa13.26□□□□□ -0.29
ECHDC1-220ENST00000528402 WISP1O95388 367 aa13.26□□□□□ -0.29
ECHDC1-220ENST00000528402 CSF3P09919 207 aa13.26□□□□□ -0.29
ECHDC1-220ENST00000528402 JMJD7P0C870 316 aa13.26□□□□□ -0.29
ECHDC1-220ENST00000528402 OR8G3PP0DMU2 310 aa13.26□□□□□ -0.29
ECHDC1-220ENST00000528402 EPXP11678 715 aa13.26□□□□□ -0.29
ECHDC1-220ENST00000528402 NR2C1P13056 603 aa13.26□□□□□ -0.29
ECHDC1-220ENST00000528402 CD59P13987 128 aa13.26□□□□□ -0.29
ECHDC1-220ENST00000528402 ZNF823P16415 610 aa13.26□□□□□ -0.29
ECHDC1-220ENST00000528402 PTGS2P35354 604 aa13.26□□□□□ -0.29
ECHDC1-220ENST00000528402 THBS2P35442 1172 aa13.26□□□□□ -0.29
ECHDC1-220ENST00000528402 NR4A2P43354 598 aa13.26□□□□□ -0.29
ECHDC1-220ENST00000528402 NUBP1P53384 320 aa13.26□□□□□ -0.29
ECHDC1-220ENST00000528402 SLC35A1P78382 337 aa13.26□□□□□ -0.29
ECHDC1-220ENST00000528402 PITPNAQ00169 270 aa13.26□□□□□ -0.29
ECHDC1-220ENST00000528402 DBPQ10586 325 aaPredicted RBP13.26□□□□□ -0.29
ECHDC1-220ENST00000528402 MYBPHQ13203 477 aa13.26□□□□□ -0.29
ECHDC1-220ENST00000528402 SLC17A1Q14916 467 aa13.26□□□□□ -0.29
ECHDC1-220ENST00000528402 THEM4Q5T1C6 240 aa13.26□□□□□ -0.29
ECHDC1-220ENST00000528402 CDCP2Q5VXM1 449 aa13.26□□□□□ -0.29
ECHDC1-220ENST00000528402 TRIQKQ629K1 86 aa13.26□□□□□ -0.29
ECHDC1-220ENST00000528402 BICRALQ6AI39 1079 aa13.26□□□□□ -0.29
ECHDC1-220ENST00000528402 TCEAL6Q6IPX3 200 aa13.26□□□□□ -0.29
ECHDC1-220ENST00000528402 MZT2BQ6NZ67 158 aa13.26□□□□□ -0.29
ECHDC1-220ENST00000528402 LYPD4Q6UWN0 246 aa13.26□□□□□ -0.29
ECHDC1-220ENST00000528402 IL20RBQ6UXL0 311 aa13.26□□□□□ -0.29
ECHDC1-220ENST00000528402 NAXDQ8IW45 347 aa13.26□□□□□ -0.29
ECHDC1-220ENST00000528402 Q8N402 240 aa13.26□□□□□ -0.29
ECHDC1-220ENST00000528402 OR2G2Q8NGZ5 317 aa13.26□□□□□ -0.29
ECHDC1-220ENST00000528402 GPR148Q8TDV2 347 aa13.26□□□□□ -0.29
ECHDC1-220ENST00000528402 RNF128Q8TEB7 428 aa13.26□□□□□ -0.29
ECHDC1-220ENST00000528402 ADAMTS14Q8WXS8 1223 aa13.26□□□□□ -0.29
ECHDC1-220ENST00000528402 HTRA1Q92743 480 aa13.26□□□□□ -0.29
ECHDC1-220ENST00000528402 TCEAL3Q969E4 200 aa13.26□□□□□ -0.29
ECHDC1-220ENST00000528402 TMEM41AQ96HV5 264 aa13.26□□□□□ -0.29
ECHDC1-220ENST00000528402 MAP6Q96JE9 813 aa13.26□□□□□ -0.29
ECHDC1-220ENST00000528402 KCNK17Q96T54 332 aa13.26□□□□□ -0.29
ECHDC1-220ENST00000528402 KCNJ15Q99712 375 aa13.26□□□□□ -0.29
ECHDC1-220ENST00000528402 PDCD1LG2Q9BQ51 273 aa13.26□□□□□ -0.29
ECHDC1-220ENST00000528402 NEURL2Q9BR09 285 aa13.26□□□□□ -0.29
ECHDC1-220ENST00000528402 TTTY10Q9BZA0 68 aa13.26□□□□□ -0.29
ECHDC1-220ENST00000528402 HPF1Q9NWY4 346 aa13.26□□□□□ -0.29
ECHDC1-220ENST00000528402 NPAP1Q9NZP6 1156 aa13.26□□□□□ -0.29
ECHDC1-220ENST00000528402 TBC1D24Q9ULP9 559 aa13.26□□□□□ -0.29
ECHDC1-220ENST00000528402 SPATA2Q9UM82 520 aa13.26□□□□□ -0.29
ECHDC1-220ENST00000528402 PCDHGA1Q9Y5H4 931 aa13.26□□□□□ -0.29
ECHDC1-220ENST00000528402 A0A1W2PQ09 198 aa13.25□□□□□ -0.29
ECHDC1-220ENST00000528402 B4DXG7 233 aa13.25□□□□□ -0.29
ECHDC1-220ENST00000528402 SNPHO15079 494 aa13.25□□□□□ -0.29
ECHDC1-220ENST00000528402 EFNA2O43921 213 aa13.25□□□□□ -0.29
ECHDC1-220ENST00000528402 CBR3O75828 277 aa13.25□□□□□ -0.29
ECHDC1-220ENST00000528402 ZNF806P0C7X5 589 aa13.25□□□□□ -0.29
ECHDC1-220ENST00000528402 IFNGR1P15260 489 aa13.25□□□□□ -0.29
ECHDC1-220ENST00000528402 CTLA4P16410 223 aa13.25□□□□□ -0.29
ECHDC1-220ENST00000528402 ZNF17P17021 662 aa13.25□□□□□ -0.29
ECHDC1-220ENST00000528402 TCN2P20062 427 aa13.25□□□□□ -0.29
ECHDC1-220ENST00000528402 NANOS3P60323 173 aaKnown RBP13.25□□□□□ -0.29
ECHDC1-220ENST00000528402 GPR85P60893 370 aa13.25□□□□□ -0.29
ECHDC1-220ENST00000528402 ADAM8P78325 824 aa13.25□□□□□ -0.29
ECHDC1-220ENST00000528402 PCK2Q16822 640 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms