RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 MST1LQ2TV78 715 aa8.33□□□□□ -1.08
CHD7-208ENST00000528280 SLC36A2Q495M3 483 aa8.33□□□□□ -1.08
CHD7-208ENST00000528280 IFI44LQ53G44 452 aa8.33□□□□□ -1.08
CHD7-208ENST00000528280 PHYHD1Q5SRE7 291 aa8.33□□□□□ -1.08
CHD7-208ENST00000528280 TMEM53Q6P2H8 277 aa8.33□□□□□ -1.08
CHD7-208ENST00000528280 UNQ6126/PRO20091Q6UXV3 157 aa8.33□□□□□ -1.08
CHD7-208ENST00000528280 CCDC121Q6ZUS5 278 aa8.33□□□□□ -1.08
CHD7-208ENST00000528280 CBLL1Q75N03 491 aa8.33□□□□□ -1.08
CHD7-208ENST00000528280 SLC46A3Q7Z3Q1 461 aa8.33□□□□□ -1.08
CHD7-208ENST00000528280 NKAIN4Q8IVV8 208 aa8.33□□□□□ -1.08
CHD7-208ENST00000528280 SLC22A24Q8N4F4 322 aa8.33□□□□□ -1.08
CHD7-208ENST00000528280 POU5F2Q8N7G0 328 aa8.33□□□□□ -1.08
CHD7-208ENST00000528280 CCDC197Q8NCU1 140 aa8.33□□□□□ -1.08
CHD7-208ENST00000528280 OR1J2Q8NGS2 313 aa8.33□□□□□ -1.08
CHD7-208ENST00000528280 NEU4Q8WWR8 484 aaPredicted RBP8.33□□□□□ -1.08
CHD7-208ENST00000528280 BPIFA2Q96DR5 249 aa8.33□□□□□ -1.08
CHD7-208ENST00000528280 RBP7Q96R05 134 aa8.33□□□□□ -1.08
CHD7-208ENST00000528280 VRK1Q99986 396 aaPredicted RBP8.33□□□□□ -1.08
CHD7-208ENST00000528280 KCTD14Q9BQ13 255 aaPredicted RBP8.33□□□□□ -1.08
CHD7-208ENST00000528280 MS4A5Q9H3V2 200 aa8.33□□□□□ -1.08
CHD7-208ENST00000528280 PLK3Q9H4B4 646 aa8.33□□□□□ -1.08
CHD7-208ENST00000528280 ANKRD19PQ9H560 264 aa8.33□□□□□ -1.08
CHD7-208ENST00000528280 SMURF2Q9HAU4 748 aa8.33□□□□□ -1.08
CHD7-208ENST00000528280 GPR160Q9UJ42 338 aa8.33□□□□□ -1.08
CHD7-208ENST00000528280 FAM32AQ9Y421 112 aaKnown RBP8.33□□□□□ -1.08
CHD7-208ENST00000528280 CMAHPQ9Y471 501 aa8.33□□□□□ -1.08
CHD7-208ENST00000528280 CHD3Q12873 2000 aaKnown RBP8.32□□□□□ -1.08
CHD7-208ENST00000528280 TLN2Q9Y4G6 2542 aa8.32□□□□□ -1.08
CHD7-208ENST00000528280 IGHV2OR16-5A0A0B4J2B6 119 aa8.32□□□□□ -1.08
CHD7-208ENST00000528280 LOC390937A0A1W2PQ73 354 aa8.32□□□□□ -1.08
CHD7-208ENST00000528280 NDUFS7O75251 213 aa8.32□□□□□ -1.08
CHD7-208ENST00000528280 ZNF682O95780 498 aa8.32□□□□□ -1.08
CHD7-208ENST00000528280 HLA-HP01893 362 aa8.32□□□□□ -1.08
CHD7-208ENST00000528280 TSPAN19P0C672 248 aa8.32□□□□□ -1.08
CHD7-208ENST00000528280 PGA4P0DJD7 388 aa8.32□□□□□ -1.08
CHD7-208ENST00000528280 PGA3P0DJD8 388 aa8.32□□□□□ -1.08
CHD7-208ENST00000528280 THBS4P35443 961 aa8.32□□□□□ -1.08
CHD7-208ENST00000528280 GLRXP35754 106 aa8.32□□□□□ -1.08
CHD7-208ENST00000528280 PTDSS1P48651 473 aaKnown RBP8.32□□□□□ -1.08
CHD7-208ENST00000528280 SLC9A3P48764 834 aa8.32□□□□□ -1.08
CHD7-208ENST00000528280 PPOXP50336 477 aa8.32□□□□□ -1.08
CHD7-208ENST00000528280 PDLIM4P50479 330 aa8.32□□□□□ -1.08
CHD7-208ENST00000528280 NUDT2P50583 147 aa8.32□□□□□ -1.08
CHD7-208ENST00000528280 MNAT1P51948 309 aa8.32□□□□□ -1.08
CHD7-208ENST00000528280 SLC7A2P52569 658 aa8.32□□□□□ -1.08
CHD7-208ENST00000528280 SEC24CP53992 1094 aa8.32□□□□□ -1.08
CHD7-208ENST00000528280 UGT2B15P54855 530 aa8.32□□□□□ -1.08
CHD7-208ENST00000528280 TUBA1BP68363 451 aa8.32□□□□□ -1.08
CHD7-208ENST00000528280 TUBA4AP68366 448 aa8.32□□□□□ -1.08
CHD7-208ENST00000528280 HGFACQ04756 655 aa8.32□□□□□ -1.08
CHD7-208ENST00000528280 PRKCDQ05655 676 aa8.32□□□□□ -1.08
CHD7-208ENST00000528280 RPL18Q07020 188 aaKnown RBP8.32□□□□□ -1.08
CHD7-208ENST00000528280 PIGFQ07326 219 aa8.32□□□□□ -1.08
CHD7-208ENST00000528280 LOXL1Q08397 574 aaPredicted RBP8.32□□□□□ -1.08
CHD7-208ENST00000528280 MOGQ16653 247 aa8.32□□□□□ -1.08
CHD7-208ENST00000528280 THEM4Q5T1C6 240 aa8.32□□□□□ -1.08
CHD7-208ENST00000528280 FAM205BPQ63HN1 556 aa8.32□□□□□ -1.08
CHD7-208ENST00000528280 C8orf82Q6P1X6 216 aaPredicted RBP8.32□□□□□ -1.08
CHD7-208ENST00000528280 LRFN4Q6PJG9 635 aa8.32□□□□□ -1.08
CHD7-208ENST00000528280 VHLLQ6RSH7 139 aa8.32□□□□□ -1.08
CHD7-208ENST00000528280 TUBA1AQ71U36 451 aa8.32□□□□□ -1.08
CHD7-208ENST00000528280 PIGWQ7Z7B1 504 aa8.32□□□□□ -1.08
CHD7-208ENST00000528280 C1orf174Q8IYL3 243 aa8.32□□□□□ -1.08
CHD7-208ENST00000528280 TMEM255BQ8WV15 326 aa8.32□□□□□ -1.08
CHD7-208ENST00000528280 ACOT11Q8WXI4 607 aaPredicted RBP8.32□□□□□ -1.08
CHD7-208ENST00000528280 MCHR2Q969V1 340 aa8.32□□□□□ -1.08
CHD7-208ENST00000528280 FAM162AQ96A26 154 aa8.32□□□□□ -1.08
CHD7-208ENST00000528280 TNFRSF13CQ96RJ3 184 aa8.32□□□□□ -1.08
CHD7-208ENST00000528280 SEPHS2Q99611 448 aa8.32□□□□□ -1.08
CHD7-208ENST00000528280 DOK1Q99704 481 aa8.32□□□□□ -1.08
CHD7-208ENST00000528280 WACQ9BTA9 647 aa8.32□□□□□ -1.08
CHD7-208ENST00000528280 MRPL13Q9BYD1 178 aaKnown RBP8.32□□□□□ -1.08
CHD7-208ENST00000528280 TXNIPQ9H3M7 391 aa8.32□□□□□ -1.08
CHD7-208ENST00000528280 RNF121Q9H920 327 aa8.32□□□□□ -1.08
CHD7-208ENST00000528280 SIAEQ9HAT2 523 aa8.32□□□□□ -1.08
CHD7-208ENST00000528280 SPAG4Q9NPE6 437 aa8.32□□□□□ -1.08
CHD7-208ENST00000528280 TMEM38BQ9NVV0 291 aa8.32□□□□□ -1.08
CHD7-208ENST00000528280 A4GNTQ9UNA3 340 aa8.32□□□□□ -1.08
CHD7-208ENST00000528280 HIF3AQ9Y2N7 669 aa8.32□□□□□ -1.08
CHD7-208ENST00000528280 IQCMA0A1B0GVH7 501 aa8.31□□□□□ -1.08
CHD7-208ENST00000528280 A6NIZ1 184 aa8.31□□□□□ -1.08
CHD7-208ENST00000528280 hCG_2039718K7EN88 272 aa8.31□□□□□ -1.08
CHD7-208ENST00000528280 NME4O00746 187 aa8.31□□□□□ -1.08
CHD7-208ENST00000528280 AHCYL1O43865 530 aa8.31□□□□□ -1.08
CHD7-208ENST00000528280 CD5LO43866 347 aa8.31□□□□□ -1.08
CHD7-208ENST00000528280 SNX3O60493 162 aa8.31□□□□□ -1.08
CHD7-208ENST00000528280 F13BP05160 661 aa8.31□□□□□ -1.08
CHD7-208ENST00000528280 SAGP10523 405 aaPredicted RBP8.31□□□□□ -1.08
CHD7-208ENST00000528280 IFI30P13284 250 aa8.31□□□□□ -1.08
CHD7-208ENST00000528280 ZNF35P13682 527 aa8.31□□□□□ -1.08
CHD7-208ENST00000528280 B4GALT1P15291 398 aa8.31□□□□□ -1.08
CHD7-208ENST00000528280 ZNF14P17017 642 aaPredicted RBP8.31□□□□□ -1.08
CHD7-208ENST00000528280 ITGA2P17301 1181 aa8.31□□□□□ -1.08
CHD7-208ENST00000528280 TNFRSF1BP20333 461 aa8.31□□□□□ -1.08
CHD7-208ENST00000528280 USF1P22415 310 aaPredicted RBP8.31□□□□□ -1.08
CHD7-208ENST00000528280 CALCRP30988 508 aa8.31□□□□□ -1.08
CHD7-208ENST00000528280 AQP2P41181 271 aa8.31□□□□□ -1.08
CHD7-208ENST00000528280 RAD52P43351 418 aa8.31□□□□□ -1.08
CHD7-208ENST00000528280 GIPRP48546 466 aa8.31□□□□□ -1.08
CHD7-208ENST00000528280 GSK3BP49841 420 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms