RNA–Protein interactions for RNA: ENST00000528149.5

CCDC90B-210, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-210ENST00000528149 NKX1-2Q9UD57 310 aaPredicted RBP10.18□□□□□ -0.78
CCDC90B-210ENST00000528149 RCE1Q9Y256 329 aa10.18□□□□□ -0.78
CCDC90B-210ENST00000528149 ANK3Q12955 4377 aaKnown RBP10.18□□□□□ -0.78
CCDC90B-210ENST00000528149 TEX13CA0A0J9YWL9 993 aa10.17□□□□□ -0.78
CCDC90B-210ENST00000528149 H3BN98 237 aa10.17□□□□□ -0.78
CCDC90B-210ENST00000528149 H7C1C5 153 aa10.17□□□□□ -0.78
CCDC90B-210ENST00000528149 SOCS2O14508 198 aa10.17□□□□□ -0.78
CCDC90B-210ENST00000528149 MSTNO14793 375 aa10.17□□□□□ -0.78
CCDC90B-210ENST00000528149 SIAH2O43255 324 aa10.17□□□□□ -0.78
CCDC90B-210ENST00000528149 WIPF1O43516 503 aa10.17□□□□□ -0.78
CCDC90B-210ENST00000528149 SLC43A1O75387 559 aa10.17□□□□□ -0.78
CCDC90B-210ENST00000528149 ZNF432O94892 652 aa10.17□□□□□ -0.78
CCDC90B-210ENST00000528149 ATE1O95260 518 aa10.17□□□□□ -0.78
CCDC90B-210ENST00000528149 BCL10O95999 233 aa10.17□□□□□ -0.78
CCDC90B-210ENST00000528149 CD8BP10966 210 aa10.17□□□□□ -0.78
CCDC90B-210ENST00000528149 IGFBP5P24593 272 aa10.17□□□□□ -0.78
CCDC90B-210ENST00000528149 POU1F1P28069 291 aa10.17□□□□□ -0.78
CCDC90B-210ENST00000528149 PEX2P28328 305 aa10.17□□□□□ -0.78
CCDC90B-210ENST00000528149 ASCL1P50553 236 aa10.17□□□□□ -0.78
CCDC90B-210ENST00000528149 FOXG1P55316 489 aaPredicted RBP10.17□□□□□ -0.78
CCDC90B-210ENST00000528149 RPL27P61353 136 aaKnown RBP10.17□□□□□ -0.78
CCDC90B-210ENST00000528149 LCN6P62502 163 aa10.17□□□□□ -0.78
CCDC90B-210ENST00000528149 PPP2R2BQ00005 443 aa10.17□□□□□ -0.78
CCDC90B-210ENST00000528149 RUNX1T1Q06455 604 aa10.17□□□□□ -0.78
CCDC90B-210ENST00000528149 KRR1Q13601 381 aaKnown RBP10.17□□□□□ -0.78
CCDC90B-210ENST00000528149 TAF11Q15544 211 aa10.17□□□□□ -0.78
CCDC90B-210ENST00000528149 TRIP10Q15642 601 aa10.17□□□□□ -0.78
CCDC90B-210ENST00000528149 RFX4Q33E94 735 aa10.17□□□□□ -0.78
CCDC90B-210ENST00000528149 TSPO2Q5TGU0 170 aa10.17□□□□□ -0.78
CCDC90B-210ENST00000528149 KDM4DQ6B0I6 523 aa10.17□□□□□ -0.78
CCDC90B-210ENST00000528149 CD300LDQ6UXZ3 194 aa10.17□□□□□ -0.78
CCDC90B-210ENST00000528149 CDC20BQ86Y33 519 aa10.17□□□□□ -0.78
CCDC90B-210ENST00000528149 UBE2J2Q8N2K1 259 aa10.17□□□□□ -0.78
CCDC90B-210ENST00000528149 CIARTQ8N365 385 aaPredicted RBP10.17□□□□□ -0.78
CCDC90B-210ENST00000528149 CBR4Q8N4T8 237 aa10.17□□□□□ -0.78
CCDC90B-210ENST00000528149 CLDN22Q8N7P3 220 aa10.17□□□□□ -0.78
CCDC90B-210ENST00000528149 NOXO1Q8NFA2 376 aa10.17□□□□□ -0.78
CCDC90B-210ENST00000528149 ZNF519Q8TB69 540 aa10.17□□□□□ -0.78
CCDC90B-210ENST00000528149 TEX47Q8TBZ9 253 aa10.17□□□□□ -0.78
CCDC90B-210ENST00000528149 HDAC2Q92769 488 aaKnown RBP10.17□□□□□ -0.78
CCDC90B-210ENST00000528149 COX4I2Q96KJ9 171 aa10.17□□□□□ -0.78
CCDC90B-210ENST00000528149 ZNF570Q96NI8 536 aa10.17□□□□□ -0.78
CCDC90B-210ENST00000528149 IFT27Q9BW83 186 aa10.17□□□□□ -0.78
CCDC90B-210ENST00000528149 RBM24Q9BX46 236 aaKnown RBP10.17□□□□□ -0.78
CCDC90B-210ENST00000528149 TSSK6Q9BXA6 273 aa10.17□□□□□ -0.78
CCDC90B-210ENST00000528149 SLCO5A1Q9H2Y9 848 aa10.17□□□□□ -0.78
CCDC90B-210ENST00000528149 SLC7A10Q9NS82 523 aa10.17□□□□□ -0.78
CCDC90B-210ENST00000528149 TMEFF2Q9UIK5 374 aaPredicted RBP10.17□□□□□ -0.78
CCDC90B-210ENST00000528149 METRNQ9UJH8 293 aa10.17□□□□□ -0.78
CCDC90B-210ENST00000528149 EDARQ9UNE0 448 aa10.17□□□□□ -0.78
CCDC90B-210ENST00000528149 POFUT2Q9Y2G5 429 aa10.17□□□□□ -0.78
CCDC90B-210ENST00000528149 IER3IP1Q9Y5U9 82 aa10.17□□□□□ -0.78
CCDC90B-210ENST00000528149 A0A1W2PPR1 153 aa10.16□□□□□ -0.78
CCDC90B-210ENST00000528149 NPIPB13A6NJU9 1138 aa10.16□□□□□ -0.78
CCDC90B-210ENST00000528149 ZNF726A6NNF4 738 aa10.16□□□□□ -0.78
CCDC90B-210ENST00000528149 NPIPB4C9JG80 1138 aa10.16□□□□□ -0.78
CCDC90B-210ENST00000528149 BHLHE40O14503 412 aa10.16□□□□□ -0.78
CCDC90B-210ENST00000528149 UPK3AO75631 287 aa10.16□□□□□ -0.78
CCDC90B-210ENST00000528149 TRMUO75648 421 aaKnown RBP10.16□□□□□ -0.78
CCDC90B-210ENST00000528149 RAF1P04049 648 aa10.16□□□□□ -0.78
CCDC90B-210ENST00000528149 PGA4P0DJD7 388 aa10.16□□□□□ -0.78
CCDC90B-210ENST00000528149 PGA3P0DJD8 388 aa10.16□□□□□ -0.78
CCDC90B-210ENST00000528149 OSMP13725 252 aa10.16□□□□□ -0.78
CCDC90B-210ENST00000528149 ACVR1BP36896 505 aa10.16□□□□□ -0.78
CCDC90B-210ENST00000528149 CSNK1A1P48729 337 aa10.16□□□□□ -0.78
CCDC90B-210ENST00000528149 MYBPC1Q00872 1141 aa10.16□□□□□ -0.78
CCDC90B-210ENST00000528149 COX10Q12887 443 aa10.16□□□□□ -0.78
CCDC90B-210ENST00000528149 DAG1Q14118 895 aa10.16□□□□□ -0.78
CCDC90B-210ENST00000528149 LRRC36Q1X8D7 754 aa10.16□□□□□ -0.78
CCDC90B-210ENST00000528149 MESTQ5EB52 335 aa10.16□□□□□ -0.78
CCDC90B-210ENST00000528149 PHYHD1Q5SRE7 291 aa10.16□□□□□ -0.78
CCDC90B-210ENST00000528149 ARMC4Q5T2S8 1044 aa10.16□□□□□ -0.78
CCDC90B-210ENST00000528149 C9orf135Q5VTT2 229 aa10.16□□□□□ -0.78
CCDC90B-210ENST00000528149 LPCAT4Q643R3 524 aa10.16□□□□□ -0.78
CCDC90B-210ENST00000528149 RPL13AP3Q6NVV1 102 aa10.16□□□□□ -0.78
CCDC90B-210ENST00000528149 DPY19L2P2Q6ZN68 376 aa10.16□□□□□ -0.78
CCDC90B-210ENST00000528149 LINGO2Q7L985 606 aa10.16□□□□□ -0.78
CCDC90B-210ENST00000528149 FAM122BQ7Z309 247 aa10.16□□□□□ -0.78
CCDC90B-210ENST00000528149 GPR137CQ8N3F9 429 aa10.16□□□□□ -0.78
CCDC90B-210ENST00000528149 SYT14Q8NB59 555 aa10.16□□□□□ -0.78
CCDC90B-210ENST00000528149 OR4Q3Q8NH05 313 aa10.16□□□□□ -0.78
CCDC90B-210ENST00000528149 OR6X1Q8NH79 312 aa10.16□□□□□ -0.78
CCDC90B-210ENST00000528149 MAGEE2Q8TD90 523 aaPredicted RBP10.16□□□□□ -0.78
CCDC90B-210ENST00000528149 DNAJC9Q8WXX5 260 aa10.16□□□□□ -0.78
CCDC90B-210ENST00000528149 EME1Q96AY2 570 aa10.16□□□□□ -0.78
CCDC90B-210ENST00000528149 ADAD1Q96M93 576 aaKnown RBP10.16□□□□□ -0.78
CCDC90B-210ENST00000528149 ERMAPQ96PL5 475 aaPredicted RBP10.16□□□□□ -0.78
CCDC90B-210ENST00000528149 RBM4BQ9BQ04 359 aaKnown RBP10.16□□□□□ -0.78
CCDC90B-210ENST00000528149 C9orf16Q9BUW7 83 aa10.16□□□□□ -0.78
CCDC90B-210ENST00000528149 RBM4Q9BWF3 364 aaKnown RBP10.16□□□□□ -0.78
CCDC90B-210ENST00000528149 OSBPL10Q9BXB5 764 aa10.16□□□□□ -0.78
CCDC90B-210ENST00000528149 DCLRE1BQ9H816 532 aa10.16□□□□□ -0.78
CCDC90B-210ENST00000528149 RNPEPL1Q9HAU8 725 aa10.16□□□□□ -0.78
CCDC90B-210ENST00000528149 NRIP3Q9NQ35 241 aa10.16□□□□□ -0.78
CCDC90B-210ENST00000528149 PLSCR4Q9NRQ2 329 aa10.16□□□□□ -0.78
CCDC90B-210ENST00000528149 PARPBPQ9NWS1 579 aa10.16□□□□□ -0.78
CCDC90B-210ENST00000528149 IL20Q9NYY1 176 aa10.16□□□□□ -0.78
CCDC90B-210ENST00000528149 STX18Q9P2W9 335 aaKnown RBP10.16□□□□□ -0.78
CCDC90B-210ENST00000528149 ZNF346Q9UL40 294 aaKnown RBP10.16□□□□□ -0.78
CCDC90B-210ENST00000528149 A8MXE2 369 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms