RNA–Protein interactions for RNA: ENST00000527962.5

CTTN-212, Transcript of cortactin, humanhuman

TSL 2

Gene CTTN, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-212ENST00000527962 FAM157BP0CG42 384 aa13.47□□□□□ -0.25
CTTN-212ENST00000527962 FPR2P25090 351 aa13.47□□□□□ -0.25
CTTN-212ENST00000527962 CRYBB2P43320 205 aa13.47□□□□□ -0.25
CTTN-212ENST00000527962 MAGEB1P43366 347 aa13.47□□□□□ -0.25
CTTN-212ENST00000527962 CCL8P80075 99 aa13.47□□□□□ -0.25
CTTN-212ENST00000527962 MVKQ03426 396 aa13.47□□□□□ -0.25
CTTN-212ENST00000527962 SCARB2Q14108 478 aa13.47□□□□□ -0.25
CTTN-212ENST00000527962 ALKBH6Q3KRA9 238 aa13.47□□□□□ -0.25
CTTN-212ENST00000527962 TNFAIP8L3Q5GJ75 292 aa13.47□□□□□ -0.25
CTTN-212ENST00000527962 FAM209AQ5JX71 171 aa13.47□□□□□ -0.25
CTTN-212ENST00000527962 UNQ6126/PRO20091Q6UXV3 157 aa13.47□□□□□ -0.25
CTTN-212ENST00000527962 SLC35D2Q76EJ3 337 aa13.47□□□□□ -0.25
CTTN-212ENST00000527962 HIST3H2AQ7L7L0 130 aa13.47□□□□□ -0.25
CTTN-212ENST00000527962 ARMC8Q8IUR7 673 aa13.47□□□□□ -0.25
CTTN-212ENST00000527962 BPIFB2Q8N4F0 458 aa13.47□□□□□ -0.25
CTTN-212ENST00000527962 RAB1CQ92928 201 aa13.47□□□□□ -0.25
CTTN-212ENST00000527962 HIST1H2ACQ93077 130 aa13.47□□□□□ -0.25
CTTN-212ENST00000527962 SLC25A44Q96H78 314 aaPredicted RBP13.47□□□□□ -0.25
CTTN-212ENST00000527962 MOGAT1Q96PD6 335 aa13.47□□□□□ -0.25
CTTN-212ENST00000527962 LOC105371242A0A075B767 164 aa13.46□□□□□ -0.25
CTTN-212ENST00000527962 TMEM120BA0PK00 339 aa13.46□□□□□ -0.25
CTTN-212ENST00000527962 CLDN25C9JDP6 229 aa13.46□□□□□ -0.25
CTTN-212ENST00000527962 C11orf98E9PRG8 122 aa13.46□□□□□ -0.25
CTTN-212ENST00000527962 WIPF1O43516 503 aa13.46□□□□□ -0.25
CTTN-212ENST00000527962 RNF13O43567 381 aa13.46□□□□□ -0.25
CTTN-212ENST00000527962 TPST1O60507 370 aa13.46□□□□□ -0.25
CTTN-212ENST00000527962 FMO6PO60774 539 aa13.46□□□□□ -0.25
CTTN-212ENST00000527962 NCR1O76036 304 aa13.46□□□□□ -0.25
CTTN-212ENST00000527962 SNAP29O95721 258 aa13.46□□□□□ -0.25
CTTN-212ENST00000527962 ZNF250P15622 560 aa13.46□□□□□ -0.25
CTTN-212ENST00000527962 ARFIP2P53365 341 aa13.46□□□□□ -0.25
CTTN-212ENST00000527962 SLC18A1P54219 525 aa13.46□□□□□ -0.25
CTTN-212ENST00000527962 CDH12P55289 794 aa13.46□□□□□ -0.25
CTTN-212ENST00000527962 NRN1LQ496H8 165 aa13.46□□□□□ -0.25
CTTN-212ENST00000527962 LRIF1Q5T3J3 769 aa13.46□□□□□ -0.25
CTTN-212ENST00000527962 DCAF12L2Q5VW00 463 aa13.46□□□□□ -0.25
CTTN-212ENST00000527962 ZNF613Q6PF04 617 aa13.46□□□□□ -0.25
CTTN-212ENST00000527962 NHLRC1Q6VVB1 395 aa13.46□□□□□ -0.25
CTTN-212ENST00000527962 RBMS3Q6XE24 437 aaKnown RBP13.46□□□□□ -0.25
CTTN-212ENST00000527962 SLC16A14Q7RTX9 510 aa13.46□□□□□ -0.25
CTTN-212ENST00000527962 C1QL2Q7Z5L3 287 aa13.46□□□□□ -0.25
CTTN-212ENST00000527962 RETREG3Q86VR2 466 aa13.46□□□□□ -0.25
CTTN-212ENST00000527962 CPEB3Q8NE35 698 aaKnown RBP13.46□□□□□ -0.25
CTTN-212ENST00000527962 TMEM54Q969K7 222 aa13.46□□□□□ -0.25
CTTN-212ENST00000527962 OR52B2Q96RD2 323 aa13.46□□□□□ -0.25
CTTN-212ENST00000527962 KCNN2Q9H2S1 579 aa13.46□□□□□ -0.25
CTTN-212ENST00000527962 TMEM38AQ9H6F2 299 aa13.46□□□□□ -0.25
CTTN-212ENST00000527962 NTN4Q9HB63 628 aa13.46□□□□□ -0.25
CTTN-212ENST00000527962 G6PC2Q9NQR9 355 aa13.46□□□□□ -0.25
CTTN-212ENST00000527962 NANSQ9NR45 359 aa13.46□□□□□ -0.25
CTTN-212ENST00000527962 TMEM38BQ9NVV0 291 aa13.46□□□□□ -0.25
CTTN-212ENST00000527962 IGLV3-9A0A075B6K5 115 aa13.45□□□□□ -0.26
CTTN-212ENST00000527962 DHHO43323 396 aa13.45□□□□□ -0.26
CTTN-212ENST00000527962 PLPP2O43688 288 aa13.45□□□□□ -0.26
CTTN-212ENST00000527962 PATE4P0C8F1 98 aa13.45□□□□□ -0.26
CTTN-212ENST00000527962 EGR1P18146 543 aa13.45□□□□□ -0.26
CTTN-212ENST00000527962 ZNF84P51523 738 aa13.45□□□□□ -0.26
CTTN-212ENST00000527962 UCP2P55851 309 aa13.45□□□□□ -0.26
CTTN-212ENST00000527962 WDR4P57081 412 aaKnown RBP13.45□□□□□ -0.26
CTTN-212ENST00000527962 SLC3A1Q07837 685 aa13.45□□□□□ -0.26
CTTN-212ENST00000527962 AVPI1Q5T686 147 aa13.45□□□□□ -0.26
CTTN-212ENST00000527962 TTC33Q6PID6 262 aaPredicted RBP13.45□□□□□ -0.26
CTTN-212ENST00000527962 HDDC2Q7Z4H3 204 aa13.45□□□□□ -0.26
CTTN-212ENST00000527962 ZNF584Q8IVC4 421 aa13.45□□□□□ -0.26
CTTN-212ENST00000527962 ICA1LQ8NDH6 482 aa13.45□□□□□ -0.26
CTTN-212ENST00000527962 HIPK4Q8NE63 616 aa13.45□□□□□ -0.26
CTTN-212ENST00000527962 SH3GL3Q99963 347 aa13.45□□□□□ -0.26
CTTN-212ENST00000527962 SAP30LQ9HAJ7 183 aa13.45□□□□□ -0.26
CTTN-212ENST00000527962 DDX28Q9NUL7 540 aaKnown RBP13.45□□□□□ -0.26
CTTN-212ENST00000527962 ANGPT4Q9Y264 503 aa13.45□□□□□ -0.26
CTTN-212ENST00000527962 PLSCR5A0PG75 271 aa13.44□□□□□ -0.26
CTTN-212ENST00000527962 POLR3GO15318 223 aaPredicted RBP13.44□□□□□ -0.26
CTTN-212ENST00000527962 CHP2O43745 196 aa13.44□□□□□ -0.26
CTTN-212ENST00000527962 CLPTM1O96005 669 aa13.44□□□□□ -0.26
CTTN-212ENST00000527962 IGHG1P01857 330 aa13.44□□□□□ -0.26
CTTN-212ENST00000527962 GCH1P30793 250 aa13.44□□□□□ -0.26
CTTN-212ENST00000527962 APLNRP35414 380 aa13.44□□□□□ -0.26
CTTN-212ENST00000527962 CLRN1P58418 232 aa13.44□□□□□ -0.26
CTTN-212ENST00000527962 ZP4Q12836 540 aa13.44□□□□□ -0.26
CTTN-212ENST00000527962 RBM15BQ8NDT2 890 aaKnown RBP13.44□□□□□ -0.26
CTTN-212ENST00000527962 OR4K5Q8NGD3 323 aa13.44□□□□□ -0.26
CTTN-212ENST00000527962 SPDL1Q96EA4 605 aa13.44□□□□□ -0.26
CTTN-212ENST00000527962 ELMOD3Q96FG2 381 aa13.44□□□□□ -0.26
CTTN-212ENST00000527962 MCHR1Q99705 422 aa13.44□□□□□ -0.26
CTTN-212ENST00000527962 EGLN1Q9GZT9 426 aa13.44□□□□□ -0.26
CTTN-212ENST00000527962 OR51B6Q9H340 312 aa13.44□□□□□ -0.26
CTTN-212ENST00000527962 C7orf69Q9H7B7 122 aa13.44□□□□□ -0.26
CTTN-212ENST00000527962 SLCO1B3Q9NPD5 702 aa13.44□□□□□ -0.26
CTTN-212ENST00000527962 TCF7L2Q9NQB0 619 aa13.44□□□□□ -0.26
CTTN-212ENST00000527962 SLC25A37Q9NYZ2 338 aa13.44□□□□□ -0.26
CTTN-212ENST00000527962 EIF3KQ9UBQ5 218 aaKnown RBP13.44□□□□□ -0.26
CTTN-212ENST00000527962 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.44□□□□□ -0.26
CTTN-212ENST00000527962 GMEB1Q9Y692 573 aa13.44□□□□□ -0.26
CTTN-212ENST00000527962 MEGF8Q7Z7M0 2845 aa13.43□□□□□ -0.26
CTTN-212ENST00000527962 LRRN3E7EW58 273 aa13.43□□□□□ -0.26
CTTN-212ENST00000527962 TGDSO95455 350 aa13.43□□□□□ -0.26
CTTN-212ENST00000527962 CH25HO95992 272 aa13.43□□□□□ -0.26
CTTN-212ENST00000527962 QDPRP09417 244 aa13.43□□□□□ -0.26
CTTN-212ENST00000527962 UMPSP11172 480 aa13.43□□□□□ -0.26
CTTN-212ENST00000527962 GPX2P18283 190 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms