RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 ZYG11AQ6WRX3 759 aa0.95□□□□□ -2.26
ECHDC1-219ENST00000526299 ACOT7LQ6ZUV0 252 aa0.95□□□□□ -2.26
ECHDC1-219ENST00000526299 CYS1Q717R9 158 aa0.95□□□□□ -2.26
ECHDC1-219ENST00000526299 TMEM135Q86UB9 458 aa0.95□□□□□ -2.26
ECHDC1-219ENST00000526299 ZNF546Q86UE3 836 aa0.95□□□□□ -2.26
ECHDC1-219ENST00000526299 EGFL6Q8IUX8 553 aa0.95□□□□□ -2.26
ECHDC1-219ENST00000526299 VSTM4Q8IW00 320 aa0.95□□□□□ -2.26
ECHDC1-219ENST00000526299 ARHGAP18Q8N392 663 aa0.95□□□□□ -2.26
ECHDC1-219ENST00000526299 ZCCHC7Q8N3Z6 543 aaKnown RBP0.95□□□□□ -2.26
ECHDC1-219ENST00000526299 PNKDQ8N490 385 aa0.95□□□□□ -2.26
ECHDC1-219ENST00000526299 OR6C4Q8NGE1 309 aa0.95□□□□□ -2.26
ECHDC1-219ENST00000526299 OR56B2PQ8NGI1 322 aa0.95□□□□□ -2.26
ECHDC1-219ENST00000526299 OR10G9Q8NGN4 311 aa0.95□□□□□ -2.26
ECHDC1-219ENST00000526299 OR56B4Q8NH76 319 aa0.95□□□□□ -2.26
ECHDC1-219ENST00000526299 AKR7LQ8NHP1 331 aa0.95□□□□□ -2.26
ECHDC1-219ENST00000526299 FAM81AQ8TBF8 368 aa0.95□□□□□ -2.26
ECHDC1-219ENST00000526299 FANK1Q8TC84 345 aa0.95□□□□□ -2.26
ECHDC1-219ENST00000526299 MAGEE2Q8TD90 523 aaPredicted RBP0.95□□□□□ -2.26
ECHDC1-219ENST00000526299 DDI1Q8WTU0 396 aa0.95□□□□□ -2.26
ECHDC1-219ENST00000526299 EXOSC8Q96B26 276 aaKnown RBP0.95□□□□□ -2.26
ECHDC1-219ENST00000526299 C10orf35Q96D05 121 aa0.95□□□□□ -2.26
ECHDC1-219ENST00000526299 RASD2Q96D21 266 aa0.95□□□□□ -2.26
ECHDC1-219ENST00000526299 TM4SF19Q96DZ7 209 aa0.95□□□□□ -2.26
ECHDC1-219ENST00000526299 PAGE5Q96GU1 130 aa0.95□□□□□ -2.26
ECHDC1-219ENST00000526299 TIMD4Q96H15 378 aa0.95□□□□□ -2.26
ECHDC1-219ENST00000526299 PLEKHA8Q96JA3 519 aa0.95□□□□□ -2.26
ECHDC1-219ENST00000526299 PGLYRP4Q96LB8 373 aa0.95□□□□□ -2.26
ECHDC1-219ENST00000526299 HSFY1Q96LI6 401 aa0.95□□□□□ -2.26
ECHDC1-219ENST00000526299 SLC38A2Q96QD8 506 aa0.95□□□□□ -2.26
ECHDC1-219ENST00000526299 PSKH2Q96QS6 385 aa0.95□□□□□ -2.26
ECHDC1-219ENST00000526299 KLHDC3Q9BQ90 382 aa0.95□□□□□ -2.26
ECHDC1-219ENST00000526299 MFFQ9GZY8 342 aa0.95□□□□□ -2.26
ECHDC1-219ENST00000526299 IQCGQ9H095 443 aaKnown RBP0.95□□□□□ -2.26
ECHDC1-219ENST00000526299 NIPAL2Q9H841 368 aa0.95□□□□□ -2.26
ECHDC1-219ENST00000526299 ZNF430Q9H8G1 570 aaPredicted RBP0.95□□□□□ -2.26
ECHDC1-219ENST00000526299 RAB18Q9NP72 206 aa0.95□□□□□ -2.26
ECHDC1-219ENST00000526299 LZTFL1Q9NQ48 299 aa0.95□□□□□ -2.26
ECHDC1-219ENST00000526299 DDX18Q9NVP1 670 aaKnown RBP0.95□□□□□ -2.26
ECHDC1-219ENST00000526299 AIG1Q9NVV5 245 aa0.95□□□□□ -2.26
ECHDC1-219ENST00000526299 NMRK1Q9NWW6 199 aa0.95□□□□□ -2.26
ECHDC1-219ENST00000526299 GIN1Q9NXP7 522 aa0.95□□□□□ -2.26
ECHDC1-219ENST00000526299 SLC2A8Q9NY64 477 aa0.95□□□□□ -2.26
ECHDC1-219ENST00000526299 NUP50Q9UKX7 468 aa0.95□□□□□ -2.26
ECHDC1-219ENST00000526299 POLDIP2Q9Y2S7 368 aa0.95□□□□□ -2.26
ECHDC1-219ENST00000526299 SLC25A15Q9Y619 301 aa0.95□□□□□ -2.26
ECHDC1-219ENST00000526299 GOLGA6L7A0A1B0GV03 622 aa0.94□□□□□ -2.26
ECHDC1-219ENST00000526299 A0A1B0GVL5 298 aa0.94□□□□□ -2.26
ECHDC1-219ENST00000526299 ARHGEF35A5YM69 484 aa0.94□□□□□ -2.26
ECHDC1-219ENST00000526299 BTBD17A6NE02 478 aa0.94□□□□□ -2.26
ECHDC1-219ENST00000526299 NCF1BA6NI72 391 aaPredicted RBP0.94□□□□□ -2.26
ECHDC1-219ENST00000526299 A6NIZ1 184 aa0.94□□□□□ -2.26
ECHDC1-219ENST00000526299 VSTM2BA6NLU5 285 aa0.94□□□□□ -2.26
ECHDC1-219ENST00000526299 NCF1CA8MVU1 366 aaPredicted RBP0.94□□□□□ -2.26
ECHDC1-219ENST00000526299 C9JVG2 144 aa0.94□□□□□ -2.26
ECHDC1-219ENST00000526299 RPL36A-HNRNPH2H7BZ11 118 aa0.94□□□□□ -2.26
ECHDC1-219ENST00000526299 WRBO00258 174 aa0.94□□□□□ -2.26
ECHDC1-219ENST00000526299 CDC7O00311 574 aa0.94□□□□□ -2.26
ECHDC1-219ENST00000526299 DCTN6O00399 190 aa0.94□□□□□ -2.26
ECHDC1-219ENST00000526299 XKRYO14609 159 aa0.94□□□□□ -2.26
ECHDC1-219ENST00000526299 PPP1R2P9O14990 202 aa0.94□□□□□ -2.26
ECHDC1-219ENST00000526299 ENSAO43768 121 aaKnown RBP0.94□□□□□ -2.26
ECHDC1-219ENST00000526299 FCMRO60667 390 aa0.94□□□□□ -2.26
ECHDC1-219ENST00000526299 STAMBPO95630 424 aa0.94□□□□□ -2.26
ECHDC1-219ENST00000526299 FGFR1OPO95684 399 aaKnown RBP0.94□□□□□ -2.26
ECHDC1-219ENST00000526299 AGTP01019 485 aa0.94□□□□□ -2.26
ECHDC1-219ENST00000526299 IL1BP01584 269 aa0.94□□□□□ -2.26
ECHDC1-219ENST00000526299 S100A9P06702 114 aaKnown RBP0.94□□□□□ -2.26
ECHDC1-219ENST00000526299 UBTFL1P0CB47 393 aaPredicted RBP0.94□□□□□ -2.26
ECHDC1-219ENST00000526299 RBMY1CP0DJD4 496 aa0.94□□□□□ -2.26
ECHDC1-219ENST00000526299 ICAM2P13598 275 aa0.94□□□□□ -2.26
ECHDC1-219ENST00000526299 ATP6V1B2P21281 511 aa0.94□□□□□ -2.26
ECHDC1-219ENST00000526299 CHMLP26374 656 aa0.94□□□□□ -2.26
ECHDC1-219ENST00000526299 FMO3P31513 532 aa0.94□□□□□ -2.26
ECHDC1-219ENST00000526299 FDFT1P37268 417 aa0.94□□□□□ -2.26
ECHDC1-219ENST00000526299 PTGDSP41222 190 aa0.94□□□□□ -2.26
ECHDC1-219ENST00000526299 CRYBB2P43320 205 aa0.94□□□□□ -2.26
ECHDC1-219ENST00000526299 VDAC2P45880 294 aaPredicted RBP0.94□□□□□ -2.26
ECHDC1-219ENST00000526299 QARSP47897 775 aaKnown RBP0.94□□□□□ -2.26
ECHDC1-219ENST00000526299 ARFIP1P53367 373 aa0.94□□□□□ -2.26
ECHDC1-219ENST00000526299 SUB1P53999 127 aaKnown RBP eCLIP0.94□□□□□ -2.26
ECHDC1-219ENST00000526299 CRISP3P54108 245 aa0.94□□□□□ -2.26
ECHDC1-219ENST00000526299 HSPA2P54652 639 aa0.94□□□□□ -2.26
ECHDC1-219ENST00000526299 BIDP55957 195 aa0.94□□□□□ -2.26
ECHDC1-219ENST00000526299 DLX1P56177 255 aa0.94□□□□□ -2.26
ECHDC1-219ENST00000526299 SEC61GP60059 68 aa0.94□□□□□ -2.26
ECHDC1-219ENST00000526299 RAP1BP61224 184 aa0.94□□□□□ -2.26
ECHDC1-219ENST00000526299 KCNJ2P63252 427 aa0.94□□□□□ -2.26
ECHDC1-219ENST00000526299 BASP1P80723 227 aaKnown RBP0.94□□□□□ -2.26
ECHDC1-219ENST00000526299 CDK16Q00536 496 aa0.94□□□□□ -2.26
ECHDC1-219ENST00000526299 C1orf61Q13536 156 aa0.94□□□□□ -2.26
ECHDC1-219ENST00000526299 OXA1LQ15070 435 aa0.94□□□□□ -2.26
ECHDC1-219ENST00000526299 HADHQ16836 314 aaKnown RBP0.94□□□□□ -2.26
ECHDC1-219ENST00000526299 RFX4Q33E94 735 aa0.94□□□□□ -2.26
ECHDC1-219ENST00000526299 RABL6Q3YEC7 729 aaPredicted RBP0.94□□□□□ -2.26
ECHDC1-219ENST00000526299 HSP90B2PQ58FF3 399 aa0.94□□□□□ -2.26
ECHDC1-219ENST00000526299 LRRC10Q5BKY1 277 aa0.94□□□□□ -2.26
ECHDC1-219ENST00000526299 KLF17Q5JT82 389 aaPredicted RBP0.94□□□□□ -2.26
ECHDC1-219ENST00000526299 C6orf183Q5T699 404 aa0.94□□□□□ -2.26
ECHDC1-219ENST00000526299 PRAMEF5Q5TYX0 476 aa0.94□□□□□ -2.26
ECHDC1-219ENST00000526299 PRAMEF6Q5VXH4 476 aa0.94□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms